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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1004900
SRR006906.176118
400985
Bacteroidota
GGT
Thr
>SRA1004811
SRR006906.144061
64185
Bacteroidota
TGA
Ser
>SRA1004488
SRR006906.48477
187018
Bacteroidota
GAT
Ile
>SRA1004334
SRR006906.151
240785
Bacteroidota
GTC
Asp
>SRA1004335
SRR006906.270
240785
Bacteroidota
GTC
Asp
>SRA1004336
SRR006906.705
240785
Bacteroidota
GTC
Asp
>SRA1004337
SRR006906.710
240785
Bacteroidota
GTC
Asp
>SRA1004338
SRR006906.1191
240785
Bacteroidota
GTC
Asp
>SRA1004339
SRR006906.1493
240785
Bacteroidota
GTC
Asp
>SRA1004340
SRR006906.1662
240785
Bacteroidota
GTC
Asp
>SRA1004347
SRR006906.4132
240785
Bacteroidota
GTC
Asp
>SRA1004349
SRR006906.4483
240785
Bacteroidota
GTC
Asp
>SRA1004441
SRR006906.30905
240785
Bacteroidota
GTC
Asp
>SRA1004775
SRR006906.134338
46844
Bacteroidota
TAA
Leu
>SRA1004899
SRR006906.176118
140923
Bacteroidota
GTA
Tyr
>SRA1004757
SRR006906.125588
156756
Bacteroidota
TGG
Pro
>SRA1004973
SRR006906.204467
409459
Bacteroidota
TTC
Glu
>SRA1004884
SRR006906.170587
182327
Bacteroidota
TGT
Thr
>SRA1004400
SRR006906.20484
287318
Bacteroidota
GAA
Phe
>SRA1004504
SRR006906.53550
287318
Bacteroidota
GAA
Phe
>SRA1004642
SRR006906.93029
287318
Bacteroidota
GAA
Phe
>SRA1005068
SRR006906.251114
287318
Bacteroidota
GAA
Phe
>SRA1004407
SRR006906.23050
182325
Bacteroidota
GAT
Ile
>SRA1004652
SRR006906.95132
182325
Bacteroidota
GAT
Ile
>SRA1004970
SRR006906.202495
182325
Bacteroidota
GAT
Ile
>SRA1004690
SRR006906.103022
285588
Bacteroidota
TTT
Lys
>SRA1004917
SRR006906.184152
285588
Bacteroidota
TTT
Lys
>SRA1004734
SRR006906.118160
46780
Bacteroidota
TAA
Leu
>SRA1004820
SRR006906.147593
46780
Bacteroidota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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