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tRNA gene List

Calditrichota

HIT: 124 sequence(s).

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View ClustalW result

The reliable tRNA genes	All candidate tRNA genes

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
	>C171072783	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	76038	75963	-	Phe	GAA	-	○
	>C171072739	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	284232	284316	+	Leu	CAG	-	○
	>C171072740	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	547673	547748	+	Asn	GTT	-	○
	>C171072782	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	662691	662618	-	Ala	CGC	-	○
	>C171072781	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	662905	662821	-	Leu	CAA	-	○
	>C171072741	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	1051207	1051283	+	Ile	GAT	-	○
	>C171072742	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	1051444	1051517	+	Ala	TGC	-	○
	>C171072743	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	1058655	1058728	+	Thr	TGT	-	○
	>C171072744	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	1058788	1058864	+	Gly	TCC	-	○
	>C171072745	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	1058887	1058962	+	Thr	GGT	-	○
	>C171072746	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	1060378	1060452	+	Trp	CCA	-	○
	>C171072780	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	1191991	1191918	-	Glu	CTC	-	○
	>C171072779	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	1192101	1192027	-	Arg	ACG	-	○
	>C171072778	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	1192187	1192114	-	Gln	CTG	-	○
	>C171072747	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	1222185	1222259	+	Val	CAC	-	○
	>C171072777	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	1265501	1265417	-	Leu	TAG	-	○
	>C171072748	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	1393945	1394018	+	Gly	CCC	-	○
	>C171072749	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	1434458	1434532	+	Gln	TTG	-	○
	>C171072750	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	2212918	2213003	+	Leu	GAG	-	○
	>C171072751	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	2303506	2303581	+	Lys	TTT	-	○
	>C171072776	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	2384659	2384586	-	Ala	GGC	-	○
	>C171072752	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	2426108	2426181	+	Lys	CTT	-	○
	>C171072753	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	2582355	2582429	+	Pro	CGG	-	○
	>C171072775	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	2587798	2587722	-	Pro	GGG	-	○
	>C171072774	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	2879267	2879192	-	Arg	CCT	-	○
	>C171072773	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	3008906	3008818	-	Leu	TAA	-	○
	>C171072772	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	3009795	3009720	-	Cys	GCA	-	○
	>C171072771	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	3009900	3009827	-	Gly	GCC	-	○
	>C171072770	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	3108615	3108539	-	Met	CAT	-	○
	>C171072769	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	3170397	3170321	-	Val	GAC	-	○
	>C171072768	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	3170585	3170501	-	Tyr	GTA	-	○
	>C172000110	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	3171150	3171058	-	SeC	TCA	-	○
	>C171072767	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	3277230	3277154	-	Arg	CCG	-	○
	>C171072766	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	3698751	3698663	-	Ser	CGA	-	○
	>C171072765	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	3699759	3699674	-	Ser	GGA	-	○
	>C171072754	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	3806249	3806322	+	Thr	CGT	-	○
	>C171072764	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	4124178	4124087	-	Ser	GCT	-	○
	>C171072763	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	4172665	4172582	-	Ser	TGA	-	○
	>C171072762	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	4436791	4436718	-	Met	CAT	-	○
	>C171072761	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	4436905	4436829	-	Met	CAT	-	○
	>C171072755	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	4552285	4552359	+	Pro	TGG	-	○
	>C171072756	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	4552366	4552440	+	Arg	TCT	-	○
	>C171072757	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	4552449	4552524	+	His	GTG	-	○
	>C171072758	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	4552574	4552649	+	Glu	TTC	-	○
	>C171072760	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	4813545	4813468	-	Asp	GTC	-	○
	>C171072759	CP018099	Calditrichota	Caldithrix abyssi DSM 13497 LF13 [CP018099]	4823036	4823111	+	Val	TAC	-	○
	>W121008665	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	179286	179361	+	Phe	GAA	[ENA]	○
	>W121008664	AGCQ01000001	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	394718	394630	-	Ser	CGA	[ENA]	○
	>W121008663	AGCQ01000001	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	395726	395641	-	Ser	GGA	[ENA]	○
	>W121008704	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	410444	410369	-	Val	TAC	[ENA]	○
	>W121008666	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	419935	420012	+	Asp	GTC	[ENA]	○
	>W121008660	AGCQ01000001	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	501526	501599	+	Thr	CGT	[ENA]	○
	>W121008703	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	677689	677614	-	Glu	TTC	[ENA]	○
	>W121008702	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	677814	677739	-	His	GTG	[ENA]	○
	>W121008701	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	677897	677823	-	Arg	TCT	[ENA]	○
	>W121008700	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	677978	677904	-	Pro	TGG	[ENA]	○
	>W121008667	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	792973	793049	+	Met	CAT	[ENA]	○
	>W121008668	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	793087	793160	+	Met	CAT	[ENA]	○
	>W121008662	AGCQ01000001	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	817611	817520	-	Ser	GCT	[ENA]	○
	>W121008661	AGCQ01000001	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	866097	866014	-	Ser	TGA	[ENA]	○
	>W121008669	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	972653	972737	+	Leu	CAG	[ENA]	○
	>W121008670	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	1235325	1235400	+	Asn	GTT	[ENA]	○
	>W121008699	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	1349264	1349191	-	Ala	CGC	[ENA]	○
	>W121008698	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	1349478	1349394	-	Leu	CAA	[ENA]	○
	>W121008671	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	1735883	1735959	+	Ile	GAT	[ENA]	○
	>W121008672	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	1736120	1736193	+	Ala	TGC	[ENA]	○
	>W121008673	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	1743331	1743404	+	Thr	TGT	[ENA]	○
	>W121008674	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	1743464	1743540	+	Gly	TCC	[ENA]	○
	>W121008675	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	1743563	1743638	+	Thr	GGT	[ENA]	○
	>W121008676	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	1745054	1745128	+	Trp	CCA	[ENA]	○
	>W121008697	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	1876667	1876594	-	Glu	CTC	[ENA]	○
	>W121008696	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	1876777	1876703	-	Arg	ACG	[ENA]	○
	>W121008695	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	1876863	1876790	-	Gln	CTG	[ENA]	○
	>W121008677	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	1906543	1906617	+	Val	CAC	[ENA]	○
	>W121008694	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	1949856	1949772	-	Leu	TAG	[ENA]	○
	>W121008678	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	2078300	2078373	+	Gly	CCC	[ENA]	○
	>W121008679	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	2118813	2118887	+	Gln	TTG	[ENA]	○
	>W121008680	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	2893295	2893380	+	Leu	GAG	[ENA]	○
	>W121008681	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	2983607	2983682	+	Lys	TTT	[ENA]	○
	>W121008693	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	3062410	3062337	-	Ala	GGC	[ENA]	○
	>W121008682	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	3103859	3103932	+	Lys	CTT	[ENA]	○
	>W121008683	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	3256980	3257054	+	Pro	CGG	[ENA]	○
	>W121008692	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	3262423	3262347	-	Pro	GGG	[ENA]	○
	>W121008691	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	3554340	3554265	-	Arg	CCT	[ENA]	○
	>W121008690	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	3683978	3683890	-	Leu	TAA	[ENA]	○
	>W121008689	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	3684867	3684792	-	Cys	GCA	[ENA]	○
	>W121008688	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	3684972	3684899	-	Gly	GCC	[ENA]	○
	>W121008687	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	3783687	3783611	-	Met	CAT	[ENA]	○
	>W121008686	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	3845467	3845391	-	Val	GAC	[ENA]	○
	>W121008685	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	3845655	3845571	-	Tyr	GTA	[ENA]	○
	>W122000021	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	3846220	3846128	-	seC	TCA	[ENA]	○
	>W121008684	AGCQ01000003	Calditrichota	Caldithrix abyssi DSM 13497 [AGCQ]	3950607	3950531	-	Arg	CCG	[ENA]	○
	>W1711395081	MESS01000153	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	356	280	-	Val	CAC	[ENA]	○
	>W1711395070	MESS01000119	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	390	317	-	Lys	CTT	[ENA]	○
	>W1730026967	MESS01000033	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	2037	2112	+	Thr	CGT	[ENA]	○
	>W1720002800	MESS01000080	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	5786	5882	+	SeC	TCA	[ENA]	○
	>W1711395058	MESS01000030	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	6316	6242	-	Met	CAT	[ENA]	○
	>W1711395057	MESS01000030	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	6436	6360	-	Met	CAT	[ENA]	○
	>W1711395054	MESS01000010	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	7399	7312	-	Leu	TAA	[ENA]	○
	>W1711395053	MESS01000010	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	7519	7444	-	Gly	GCC	[ENA]	○
	>W1711395063	MESS01000087	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	11059	11132	+	Thr	TGT	[ENA]	○
	>W1711395055	MESS01000014	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	11077	11004	-	Gly	CCC	[ENA]	○
	>W1711395064	MESS01000087	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	11140	11223	+	Tyr	GTA	[ENA]	○
	>W1711395065	MESS01000087	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	11284	11357	+	Gly	TCC	[ENA]	○
	>W1711395066	MESS01000087	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	11394	11467	+	Thr	GGT	[ENA]	○
	>W1711395067	MESS01000087	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	12935	13009	+	Trp	CCA	[ENA]	○
	>W1711395052	MESS01000002	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	15300	15224	-	Met	CAT	[ENA]	○
	>W1711395061	MESS01000073	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	15381	15307	-	Arg	ACG	[ENA]	○
	>W1711395076	MESS01000137	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	15741	15665	-	Arg	TCG	[ENA]	○
	>W1711395080	MESS01000148	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	16744	16669	-	Phe	GAA	[ENA]	○
	>W1711395068	MESS01000102	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	18708	18785	+	Pro	TGG	[ENA]	○
	>W1711395056	MESS01000030	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	18905	18979	+	Arg	CCG	[ENA]	○
	>W1711395075	MESS01000137	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	18923	18837	-	Leu	TAG	[ENA]	○
	>W1711395069	MESS01000102	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	19016	19090	+	His	GTG	[ENA]	○
	>W1711395079	MESS01000148	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	20155	20231	+	Asp	GTC	[ENA]	○
	>W1711395060	MESS01000070	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	24821	24912	+	Ser	GGA	[ENA]	○
	>W1711395073	MESS01000137	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	26100	26194	+	Ser	GCT	[ENA]	○
	>W1711395074	MESS01000137	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	26292	26378	+	Ser	TGA	[ENA]	○
	>W1711395077	MESS01000145	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	27230	27304	+	Gln	TTG	[ENA]	○
	>W1711395078	MESS01000145	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	30240	30315	+	Lys	TTT	[ENA]	○
	>W1711395072	MESS01000128	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	37651	37576	-	Cys	GCA	[ENA]	○
	>W1711395071	MESS01000128	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	37881	37806	-	Ala	GGC	[ENA]	○
	>W1711395062	MESS01000084	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	71357	71271	-	Leu	CAG	[ENA]	○
	>W1711395059	MESS01000049	Calditrichota	Caldithrix sp. RBG_13_44_9 [MESS]	99129	99201	+	Asn	GTT	[ENA]	○
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

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