tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001806)

Anticodon = GCT

HIT: 23 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.2478 (7 seq.)
>WENV170620396 FUWD013031012 [FUWD] metagenome; unknown 6679 6584 - Ser GCT [ENA]
>WENV170628534 FUWD013248552 [FUWD] metagenome; unknown 6679 6584 - Ser GCT [ENA]
>SRA1016974 SRR035082.62211 454 Sequencing (SRP001803) 276 371 + Ser GCT [SRA]
>SRA1019001 SRR035082.384427 454 Sequencing (SRP001803) 245 150 - Ser GCT [SRA]
>SRA1019771 SRR035082.525908 454 Sequencing (SRP001803) 71 166 + Ser GCT [SRA]
>SRA1026765 SRR035085.284581 454 Sequencing (SRP001806) 145 50 - Ser GCT [SRA]
>SRA1036669 SRR035089.578413 454 Sequencing (SRP001810) 114 19 - Ser GCT [SRA]
Identical group No.5712 (3 seq.)
>SRA1025728 SRR035085.71766 454 Sequencing (SRP001806) 433 340 - Ser GCT [SRA]
>SRA1033307 SRR035088.221490 454 Sequencing (SRP001809) 187 94 - Ser GCT [SRA]
>SRA1035956 SRR035089.412710 454 Sequencing (SRP001810) 521 428 - Ser GCT [SRA]
Identical group No.5713 (1 seq.)
>SRA1025767 SRR035085.80118 454 Sequencing (SRP001806) 65 158 + Ser GCT [SRA]
Identical group No.5715 (1 seq.)
>SRA1025785 SRR035085.83273 454 Sequencing (SRP001806) 242 335 + Ser GCT [SRA]
Identical group No.5719 (1 seq.)
>SRA1026133 SRR035085.149412 454 Sequencing (SRP001806) 440 347 - Ser GCT [SRA]
Identical group No.5722 (3 seq.)
>WENV170611902 FUWD012434005 [FUWD] metagenome; unknown 67 160 + Ser GCT [ENA]
>SRA1026669 SRR035085.254459 454 Sequencing (SRP001806) 77 170 + Ser GCT [SRA]
>SRA1035472 SRR035089.311428 454 Sequencing (SRP001810) 206 299 + Ser GCT [SRA]
Identical group No.8552 (1 seq.)
>SRA1025524 SRR035085.33518 454 Sequencing (SRP001806) 382 472 + Ser GCT [SRA]
Identical group No.8553 (19 seq.)
>W131157564 AQSK01000206 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-E13 [AQSK] 33931 34023 + Ser GCT [ENA]
>W131157629 AQSM01000150 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-N14 [AQSM] 368 276 - Ser GCT [ENA]
>W131192172 ASKQ01000029 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-O17 [ASKQ] 286 194 - Ser GCT [ENA]
>W131192940 ASNH01000025 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA255-C20 [ASNH] 6953 7045 + Ser GCT [ENA]
>W131192985 ASNI01000022 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-N17 [ASNI] 8677 8585 - Ser GCT [ENA]
>W131193059 ASNM01000043 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-G08 [ASNM] 13323 13415 + Ser GCT [ENA]
>W131193141 ASNQ01000022 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-K16 [ASNQ] 9325 9233 - Ser GCT [ENA]
>W131193198 ASNT01000035 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-P10 [ASNT] 16968 17060 + Ser GCT [ENA]
>W141139674 AWNX01000008 Cloacimonetes Cloacimonetes bacterium JGI OTU-1 [AWNX] 4630 4538 - Ser GCT [ENA]
>WENV170625243 FUWD013193950 [FUWD] metagenome; unknown 4981 4889 - Ser GCT [ENA]
>WENV170633488 FUWD013396907 [FUWD] metagenome; unknown 4981 4889 - Ser GCT [ENA]
>SRA1025630 SRR035085.53463 454 Sequencing (SRP001806) 135 227 + Ser GCT [SRA]
>SRA1026168 SRR035085.157123 454 Sequencing (SRP001806) 300 392 + Ser GCT [SRA]
>SRA1026621 SRR035085.243480 454 Sequencing (SRP001806) 302 394 + Ser GCT [SRA]
>SRA1030332 SRR035087.264545 454 Sequencing (SRP001808) 242 150 - Ser GCT [SRA]
>SRA1031463 SRR035087.433744 454 Sequencing (SRP001808) 197 105 - Ser GCT [SRA]
>SRA1032099 SRR035087.552143 454 Sequencing (SRP001808) 287 379 + Ser GCT [SRA]
>SRA1033582 SRR035088.293464 454 Sequencing (SRP001809) 271 363 + Ser GCT [SRA]
>SRA1033777 SRR035088.351273 454 Sequencing (SRP001809) 377 469 + Ser GCT [SRA]
Identical group No.8554 (3 seq.)
>WENV170611863 FUWD012422092 [FUWD] metagenome; unknown 211 303 + Ser GCT [ENA]
>SRA1026070 SRR035085.136093 454 Sequencing (SRP001806) 375 467 + Ser GCT [SRA]
>SRA1030030 SRR035087.218664 454 Sequencing (SRP001808) 211 303 + Ser GCT [SRA]
Identical group No.8557 (4 seq.)
>WENV170601375 FUWD010169257 [FUWD] metagenome; unknown 205 296 + Ser GCT [ENA]
>SRA1018335 SRR035082.275308 454 Sequencing (SRP001803) 104 195 + Ser GCT [SRA]
>SRA1026633 SRR035085.245770 454 Sequencing (SRP001806) 173 82 - Ser GCT [SRA]
>SRA1030683 SRR035087.313078 454 Sequencing (SRP001808) 46 138 + Ser GCT [SRA]
Identical group No.13269 (80 seq.)
>W1711128084 LURJ01000004 Synergistetes Synechococcus sp. REDSEA-S01_B1 (LURJ) 35203 35293 + Ser GCT [ENA]
>W1711143898 LVHT01000005 Cyanobacteria Synechococcus sp. MIT S9504 (LVHT) 44183 44093 - Ser GCT [ENA]
>W1711794775 MWPA01000176 Cyanobacteria Prochlorococcus sp. HOT208_60m_805A16 (MWPA) 44783 44693 - Ser GCT [ENA]
>C016796 CP000551 Cyanobacteria Prochlorococcus marinus str. AS9601 1480539 1480451 - Ser GCT [Ensembl]
>C025079 CP000435 Cyanobacteria Synechococcus sp. CC9311 417403 417315 - Ser GCT [Ensembl]
>w019222 AAUA01000004 Cyanobacteria Synechococcus sp. RS9916 [AAUA] 204342 204249 - Ser GCT [ENA]
>w013560 AANO01000001 Cyanobacteria Synechococcus sp. WH 5701 [AANO] 330677 330584 - Ser GCT [ENA]
>WENV180085138 MPMD02286724 [MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter 260 350 + Ser GCT [ENA]
>WENV180378957 OBOO01230843 [OBOO] marine metagenome; ENVO 00002150 190 280 + Ser GCT [ENA]
>WENV170335622 CESZ01081485 [CESZ] marine metagenome genome assembly TARA_078_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 468 558 + Ser GCT [ENA]
>WENV170346174 CETG01018373 [CETG] marine metagenome genome assembly TARA_122_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 585 495 - Ser GCT [ENA]
>WENV170459355 CEVC01047884 [CEVC] marine metagenome genome assembly TARA_125_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1266 1356 + Ser GCT [ENA]
>WENV170734315 LULK01003548 [LULK] marine metagenome; Red Sea water column Station 169 - depth 10m 8 98 + Ser GCT [ENA]
>WENV170734389 LULK01005043 [LULK] marine metagenome; Red Sea water column Station 169 - depth 10m 8 98 + Ser GCT [ENA]
>WENV170738688 LULP01002067 [LULP] marine metagenome; Red Sea water column Station 149 - depth 25m 4565 4655 + Ser GCT [ENA]
>WENV170756413 LUMO01030955 [LUMO] marine metagenome; Red Sea water column Station 22 - depth 10m 9 99 + Ser GCT [ENA]
>W141464965 JFLM01000234 Cyanobacteria Prochlorococcus sp. scB241_529B19 [JFLM] 94778 94688 - Ser GCT [ENA]
>W141465098 JFLQ01000177 Cyanobacteria Prochlorococcus sp. scB241_529J15 [JFLQ] 108688 108598 - Ser GCT [ENA]
>W141465253 JFLX01000001 Cyanobacteria Prochlorococcus sp. scB243_495L20 [JFLX] 477 388 - Ser GCT [ENA]
>W141465298 JFLY01000212 Cyanobacteria Prochlorococcus sp. scB243_495N16 [JFLY] 23692 23602 - Ser GCT [ENA]
>W141465735 JFMS01000248 Cyanobacteria Prochlorococcus sp. scB243_498J20 [JFMS] 1663 1573 - Ser GCT [ENA]
>W141465846 JFMX01000106 Cyanobacteria Prochlorococcus sp. scB243_498P15 [JFMX] 119875 119785 - Ser GCT [ENA]
>WENV170925357 MDTG01082790 [MDTG] marine metagenome; seawater 12 102 + Ser GCT [ENA]
>WENV170926209 MDTG01096759 [MDTG] marine metagenome; seawater 4740 4830 + Ser GCT [ENA]
>WENV170933389 MDTG01219836 [MDTG] marine metagenome; seawater 8646 8556 - Ser GCT [ENA]
>W1910155425 BIMP01000001 Cyanobacteria cyanobiont of Ornithocercus magnificus OmCyn01 (BIMP) 419373 419462 + Ser GCT [ENA]
>W1911176868 NQKW01000006 Cyanobacteria Synechococcus sp. 1G10 (NQKW) 109236 109326 + Ser GCT [ENA]
>SRA1006249 SRR020488.15566 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 95 5 - Ser GCT [SRA]
>SRA1006263 SRR020488.21679 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 183 93 - Ser GCT [SRA]
>SRA1006309 SRR020488.39713 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 195 105 - Ser GCT [SRA]
>SRA1006322 SRR020488.45851 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 167 257 + Ser GCT [SRA]
>SRA1006326 SRR020488.48282 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 79 169 + Ser GCT [SRA]
>SRA1006345 SRR020488.53836 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 40 130 + Ser GCT [SRA]
>SRA1006382 SRR020488.69118 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 46 136 + Ser GCT [SRA]
>SRA1006443 SRR020488.89731 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 139 229 + Ser GCT [SRA]
>SRA1006474 SRR020488.101410 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 195 105 - Ser GCT [SRA]
>SRA1006475 SRR020488.101543 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 104 14 - Ser GCT [SRA]
>SRA1006506 SRR020488.112836 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 283 193 - Ser GCT [SRA]
>SRA1006545 SRR020488.128241 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 224 134 - Ser GCT [SRA]
>W1810514811 QBVL01000001 Cyanobacteria Prochlorococcus sp. AG-311-J23 (QBVL) 10343 10253 - Ser GCT [ENA]
>W1810515110 QBWC01000015 Cyanobacteria Prochlorococcus sp. AG-315-C22 (QBWC) 14272 14362 + Ser GCT [ENA]
>SRA1006647 SRR020488.165806 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 126 36 - Ser GCT [SRA]
>W1810516608 QCBE01000009 Cyanobacteria Prochlorococcus sp. AG-347-B23 (QCBE) 33844 33754 - Ser GCT [ENA]
>W1810517008 QCBR01000014 Cyanobacteria Prochlorococcus sp. AG-347-I23 (QCBR) 18556 18466 - Ser GCT [ENA]
>W1810517509 QCCI01000014 Cyanobacteria Prochlorococcus sp. AG-347-K21 (QCCI) 16431 16341 - Ser GCT [ENA]
>W1810517566 QCCL01000002 Cyanobacteria Prochlorococcus sp. AG-347-L02 (QCCL) 141447 141537 + Ser GCT [ENA]
>W1810517687 QCCP01000001 Cyanobacteria Prochlorococcus sp. AG-347-L20 (QCCP) 127745 127835 + Ser GCT [ENA]
>W1810517860 QCCU01000007 Cyanobacteria Prochlorococcus sp. AG-347-M23 (QCCU) 18522 18612 + Ser GCT [ENA]
>W1810518394 QCDO01000007 Cyanobacteria Prochlorococcus sp. AG-355-J09 (QCDO) 6141 6231 + Ser GCT [ENA]
>W1810519464 QCFC01000025 Cyanobacteria Prochlorococcus sp. AG-363-B04 (QCFC) 10564 10654 + Ser GCT [ENA]
>W1810520948 QCHG01000001 Cyanobacteria Prochlorococcus sp. AG-402-A04 (QCHG) 122748 122838 + Ser GCT [ENA]
>W1810521192 QCHN01000010 Cyanobacteria Prochlorococcus sp. AG-402-C09 (QCHN) 13618 13708 + Ser GCT [ENA]
>W1810521793 QCII01000002 Cyanobacteria Prochlorococcus sp. AG-402-K21 (QCII) 121930 122020 + Ser GCT [ENA]
>W1810522852 QCJU01000001 Cyanobacteria Prochlorococcus sp. AG-409-E23 (QCJU) 128241 128151 - Ser GCT [ENA]
>W1810523393 QCKN01000016 Cyanobacteria Prochlorococcus sp. AG-409-P03 (QCKN) 403 313 - Ser GCT [ENA]
>W1810524344 QCLY01000042 Cyanobacteria Prochlorococcus sp. AG-418-G23 (QCLY) 487 397 - Ser GCT [ENA]
>W1810524554 QCMH01000001 Cyanobacteria Prochlorococcus sp. AG-418-M21 (QCMH) 138740 138830 + Ser GCT [ENA]
>W1810525272 QCNI01000024 Cyanobacteria Prochlorococcus sp. AG-424-P16 (QCNI) 3620 3530 - Ser GCT [ENA]
>W1810526070 QCOS01000041 Cyanobacteria Prochlorococcus sp. AG-432-K16 (QCOS) 2667 2577 - Ser GCT [ENA]
>W1810526607 QCPQ01000007 Cyanobacteria Prochlorococcus sp. AG-436-O20 (QCPQ) 4145 4235 + Ser GCT [ENA]
>W1810526743 QCPW01000001 Cyanobacteria Prochlorococcus sp. AG-442-M23 (QCPW) 119908 119818 - Ser GCT [ENA]
>W1810528050 QCSI01000014 Cyanobacteria Synechococcus sp. AG-670-A04 (QCSI) 6878 6788 - Ser GCT [ENA]
>W1810529936 QCVJ01000003 Cyanobacteria Prochlorococcus sp. AG-683-O20 (QCVJ) 6293 6383 + Ser GCT [ENA]
>W1810530127 QCVU01000011 Cyanobacteria Prochlorococcus sp. AG-686-M10 (QCVU) 17963 18053 + Ser GCT [ENA]
>SRA1006813 SRR020488.217634 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 99 189 + Ser GCT [SRA]
>SRA1006874 SRR020488.244688 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 98 8 - Ser GCT [SRA]
>SRA1006894 SRR020488.255779 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 125 35 - Ser GCT [SRA]
>SRA1007076 SRR020488.324889 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 218 128 - Ser GCT [SRA]
>SRA1007192 SRR020488.371168 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 104 194 + Ser GCT [SRA]
>SRA1007326 SRR020488.411144 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 266 176 - Ser GCT [SRA]
>W1810673509 QJUE01000006 Cyanobacteria Prochlorococcus marinus XMU1408 (QJUE) 5396 5306 - Ser GCT [ENA]
>SRA1009634 SRR020491.307158 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 64 154 + Ser GCT [SRA]
>SRA1010067 SRR020491.446733 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 27 117 + Ser GCT [SRA]
>SRA1026088 SRR035085.140793 454 Sequencing (SRP001806) 278 368 + Ser GCT [SRA]
>SRA1035474 SRR035089.311902 454 Sequencing (SRP001810) 241 151 - Ser GCT [SRA]
>W1510651693 CVSZ01000020 Cyanobacteria Prochlorococcus marinus SCGC AAA795-M23 [CVSZ] 18741 18651 - Ser GCT [ENA]
>W1511218830 JNAN01000001 Cyanobacteria Prochlorococcus marinus str. MIT 9311 [JNAN] 123970 124060 + Ser GCT [ENA]
>W1511508498 JXQG01000048 Cyanobacteria Candidatus Synechococcus spongiarum SP3 [JXQG] 10192 10282 + Ser GCT [ENA]
>W1610939198 LURJ01000004 Synergistetes Synechococcus sp. REDSEA-S01_B1 (LURJ) 35203 35293 + Ser GCT [ENA]
>W1610954906 LVHT01000005 Cyanobacteria Synechococcus sp. MIT S9504 (LVHT) 44183 44093 - Ser GCT [ENA]
Identical group No.13272 (1 seq.)
>SRA1026248 SRR035085.171285 454 Sequencing (SRP001806) 286 377 + Ser GCT [SRA]
Identical group No.13273 (3 seq.)
>WENV170016682 BARS01000922 [BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula 719 808 + Ser GCT [ENA]
>SRA1026290 SRR035085.180416 454 Sequencing (SRP001806) 226 317 + Ser GCT [SRA]
>SRA1026538 SRR035085.223294 454 Sequencing (SRP001806) 226 317 + Ser GCT [SRA]
Identical group No.13275 (1 seq.)
>SRA1026691 SRR035085.261808 454 Sequencing (SRP001806) 193 284 + Ser GCT [SRA]
Identical group No.20313 (2 seq.)
>WENV170611829 FUWD012411688 [FUWD] metagenome; unknown 35 125 + Ser GCT [ENA]
>SRA1025599 SRR035085.45887 454 Sequencing (SRP001806) 45 135 + Ser GCT [SRA]
Identical group No.20320 (1 seq.)
>SRA1026534 SRR035085.222531 454 Sequencing (SRP001806) 286 376 + Ser GCT [SRA]
Identical group No.29545 (2 seq.)
>SRA1016962 SRR035082.60966 454 Sequencing (SRP001803) 139 228 + Ser GCT [SRA]
>SRA1026616 SRR035085.242484 454 Sequencing (SRP001806) 421 332 - Ser GCT [SRA]
Identical group No.56230 (6 seq.)
>WENV170605178 FUWD010456443 [FUWD] metagenome; unknown 163 78 - Ser GCT [ENA]
>SRA1026353 SRR035085.191822 454 Sequencing (SRP001806) 311 226 - Ser GCT [SRA]
>SRA1040119 SRR035091.41973 454 Sequencing (SRP001812) 223 138 - Ser GCT [SRA]
>SRA1040202 SRR035091.57489 454 Sequencing (SRP001812) 148 61 - Ser GCT [SRA]
>SRA1042874 SRR035091.459667 454 Sequencing (SRP001812) 266 351 + Ser GCT [SRA]
>SRA1049363 SRR035095.64099 454 Sequencing (SRP001816) 375 460 + Ser GCT [SRA]
Identical group No.56232 (1 seq.)
>SRA1026380 SRR035085.197658 454 Sequencing (SRP001806) 410 323 - Ser GCT [SRA]
Identical group No.73240 (1 seq.)
>SRA1025467 SRR035085.16747 454 Sequencing (SRP001806) 410 323 - Ser GCT [SRA]
Identical group No.73244 (1 seq.)
>SRA1025564 SRR035085.39774 454 Sequencing (SRP001806) 153 67 - Ser GCT [SRA]
Identical group No.100012 (1 seq.)
>SRA1026327 SRR035085.186346 454 Sequencing (SRP001806) 409 323 - Ser GCT [SRA]
Identical group No.118005 (1 seq.)
>SRA1026548 SRR035085.226153 454 Sequencing (SRP001806) 132 213 + Ser GCT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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