tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001806)

Anticodon = TTC

HIT: 26 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.240793 (1 seq.)
>SRA1025636 SRR035085.54455 454 Sequencing (SRP001806) 189 112 - Glu TTC [SRA]
Identical group No.240820 (1 seq.)
>SRA1026268 SRR035085.175913 454 Sequencing (SRP001806) 76 152 + Glu TTC [SRA]
Identical group No.240825 (3 seq.)
>WENV183806104 PVBE011085057 [PVBE] marine metagenome; water 911 835 - Glu TTC [ENA]
>WENV170017333 BART01016896 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 171 95 - Glu TTC [ENA]
>SRA1026424 SRR035085.205046 454 Sequencing (SRP001806) 213 139 - Glu TTC [SRA]
Identical group No.240826 (2 seq.)
>WENV170001050 AGBJ01001551 [AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East 317 394 + Glu TTC [ENA]
>SRA1026440 SRR035085.207271 454 Sequencing (SRP001806) 76 153 + Glu TTC [SRA]
Identical group No.240841 (1 seq.)
>SRA1026724 SRR035085.272431 454 Sequencing (SRP001806) 23 100 + Glu TTC [SRA]
Identical group No.272353 (2 seq.)
>WENV170612776 FUWD012686392 [FUWD] metagenome; unknown 201 277 + Glu TTC [ENA]
>SRA1026090 SRR035085.140992 454 Sequencing (SRP001806) 107 31 - Glu TTC [SRA]
Identical group No.272405 (3 seq.)
>WENV170612631 FUWD012648253 [FUWD] metagenome; unknown 194 267 + Glu TTC [ENA]
>SRA1026427 SRR035085.205749 454 Sequencing (SRP001806) 181 108 - Glu TTC [SRA]
>SRA1043928 SRR035092.196137 454 Sequencing (SRP001813) 194 267 + Glu TTC [SRA]
Identical group No.272406 (2 seq.)
>SRA1026429 SRR035085.205850 454 Sequencing (SRP001806) 80 154 + Glu TTC [SRA]
>SRA1026809 SRR035085.297183 454 Sequencing (SRP001806) 82 156 + Glu TTC [SRA]
Identical group No.453208 (3 seq.)
>W131193328 ASOB01000011 candidate division OP1 candidate division OP1 bacterium SCGC AAA255-C06 [ASOB] 2710 2785 + Glu TTC [ENA]
>SRA1025472 SRR035085.18584 454 Sequencing (SRP001806) 151 226 + Glu TTC [SRA]
>SRA1026093 SRR035085.141319 454 Sequencing (SRP001806) 153 228 + Glu TTC [SRA]
Identical group No.453247 (7 seq.)
>WENV170607835 FUWD010859527 [FUWD] metagenome; unknown 410 337 - Glu TTC [ENA]
>WENV170779064 LZCG01000250 [LZCG] oil field metagenome; sample BH-FW-1 from oil reservoir 2318 2393 + Glu TTC [ENA]
>SRA1025641 SRR035085.55200 454 Sequencing (SRP001806) 254 181 - Glu TTC [SRA]
>SRA1025706 SRR035085.69903 454 Sequencing (SRP001806) 25 98 + Glu TTC [SRA]
>SRA1026040 SRR035085.131818 454 Sequencing (SRP001806) 25 98 + Glu TTC [SRA]
>SRA1026046 SRR035085.132141 454 Sequencing (SRP001806) 25 98 + Glu TTC [SRA]
>SRA1026233 SRR035085.168451 454 Sequencing (SRP001806) 112 185 + Glu TTC [SRA]
Identical group No.453281 (13 seq.)
>WENV170615976 FUWD012873352 [FUWD] metagenome; unknown 91 16 - Glu TTC [ENA]
>WENV170624180 FUWD013177114 [FUWD] metagenome; unknown 2379 2304 - Glu TTC [ENA]
>WENV170632464 FUWD013382943 [FUWD] metagenome; unknown 2379 2304 - Glu TTC [ENA]
>SRA1025772 SRR035085.80386 454 Sequencing (SRP001806) 149 224 + Glu TTC [SRA]
>SRA1026349 SRR035085.190911 454 Sequencing (SRP001806) 234 309 + Glu TTC [SRA]
>SRA1029137 SRR035087.79394 454 Sequencing (SRP001808) 390 315 - Glu TTC [SRA]
>SRA1029167 SRR035087.86178 454 Sequencing (SRP001808) 82 7 - Glu TTC [SRA]
>SRA1031889 SRR035087.506055 454 Sequencing (SRP001808) 91 16 - Glu TTC [SRA]
>SRA1035520 SRR035089.323038 454 Sequencing (SRP001810) 58 133 + Glu TTC [SRA]
>SRA1047886 SRR035094.61648 454 Sequencing (SRP001815) 112 187 + Glu TTC [SRA]
>SRA1048040 SRR035094.96881 454 Sequencing (SRP001815) 112 187 + Glu TTC [SRA]
>SRA1048280 SRR035094.138893 454 Sequencing (SRP001815) 33 108 + Glu TTC [SRA]
>SRA1048349 SRR035094.153267 454 Sequencing (SRP001815) 125 200 + Glu TTC [SRA]
Identical group No.453288 (3 seq.)
>WENV170611490 FUWD012330782 [FUWD] metagenome; unknown 181 256 + Glu TTC [ENA]
>SRA1016961 SRR035082.60927 454 Sequencing (SRP001803) 181 256 + Glu TTC [SRA]
>SRA1025814 SRR035085.88129 454 Sequencing (SRP001806) 119 44 - Glu TTC [SRA]
Identical group No.453326 (7 seq.)
>WENV183512267 OMKS01000194 [OMKS] sediment metagenome; hot spring sediment 52326 52399 + Glu TTC [ENA]
>WENV170603326 FUWD010302346 [FUWD] metagenome; unknown 152 228 + Glu TTC [ENA]
>SRA1026016 SRR035085.127276 454 Sequencing (SRP001806) 118 194 + Glu TTC [SRA]
>SRA1028818 SRR035087.14707 454 Sequencing (SRP001808) 130 206 + Glu TTC [SRA]
>SRA1029673 SRR035087.161783 454 Sequencing (SRP001808) 342 266 - Glu TTC [SRA]
>SRA1034530 SRR035089.116502 454 Sequencing (SRP001810) 152 228 + Glu TTC [SRA]
>W1610004860 AHKP01000003 Euryarchaeota Methanoplanus limicola DSM 2279 [AHKP] 78862 78936 + Glu TTC [ENA]
Identical group No.453397 (1 seq.)
>SRA1026448 SRR035085.208683 454 Sequencing (SRP001806) 10 83 + Glu TTC [SRA]
Identical group No.654229 (1 seq.)
>SRA1025444 SRR035085.7979 454 Sequencing (SRP001806) 88 14 - Glu TTC [SRA]
Identical group No.654233 (4 seq.)
>WENV170626667 FUWD013228169 [FUWD] metagenome; unknown 830 758 - Glu TTC [ENA]
>SRA1025478 SRR035085.19042 454 Sequencing (SRP001806) 181 109 - Glu TTC [SRA]
>SRA1025498 SRR035085.25480 454 Sequencing (SRP001806) 181 109 - Glu TTC [SRA]
>SRA1029403 SRR035087.122127 454 Sequencing (SRP001808) 106 34 - Glu TTC [SRA]
Identical group No.654235 (21 seq.)
>W131157549 AQSK01000184 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-E13 [AQSK] 7619 7693 + Glu TTC [ENA]
>W131157626 AQSM01000141 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-N14 [AQSM] 16670 16744 + Glu TTC [ENA]
>W131192127 ASKN01000056 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-F02 [ASKN] 261 335 + Glu TTC [ENA]
>W131192139 ASKO01000016 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-M08 [ASKO] 31559 31485 - Glu TTC [ENA]
>W131192183 ASKQ01000075 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-O17 [ASKQ] 7298 7372 + Glu TTC [ENA]
>W131192925 ASNG01000021 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-O02 [ASNG] 9366 9292 - Glu TTC [ENA]
>W131192982 ASNI01000021 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-N17 [ASNI] 32807 32733 - Glu TTC [ENA]
>W131193005 ASNJ01000027 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-N11 [ASNJ] 11102 11176 + Glu TTC [ENA]
>W131193034 ASNK01000049 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-E20 [ASNK] 1921 1995 + Glu TTC [ENA]
>W131193089 ASNN01000065 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-I11 [ASNN] 7149 7223 + Glu TTC [ENA]
>W131193120 ASNO01000038 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-I16 [ASNO] 12242 12316 + Glu TTC [ENA]
>W131193170 ASNS01000020 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-P02 [ASNS] 12241 12315 + Glu TTC [ENA]
>W131193191 ASNT01000027 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-P10 [ASNT] 16726 16800 + Glu TTC [ENA]
>W141139690 AWNX01000036 Cloacimonetes Cloacimonetes bacterium JGI OTU-1 [AWNX] 23714 23640 - Glu TTC [ENA]
>WENV170624984 FUWD013189453 [FUWD] metagenome; unknown 2909 2835 - Glu TTC [ENA]
>WENV170633244 FUWD013393053 [FUWD] metagenome; unknown 2909 2835 - Glu TTC [ENA]
>SRA1025480 SRR035085.19583 454 Sequencing (SRP001806) 101 175 + Glu TTC [SRA]
>SRA1025751 SRR035085.76480 454 Sequencing (SRP001806) 102 176 + Glu TTC [SRA]
>SRA1029901 SRR035087.198904 454 Sequencing (SRP001808) 122 48 - Glu TTC [SRA]
>SRA1030769 SRR035087.329414 454 Sequencing (SRP001808) 540 466 - Glu TTC [SRA]
>SRA1034831 SRR035089.181719 454 Sequencing (SRP001810) 74 148 + Glu TTC [SRA]
Identical group No.654272 (7 seq.)
>WENV180296479 OBJA01000640 [OBJA] soil metagenome; sediment, water from around vicinity 28585 28511 - Glu TTC [ENA]
>WENV183194140 OLPS01027027 [OLPS] human gut metagenome; faeces 582 508 - Glu TTC [ENA]
>WENV183722270 PDWJ01115883 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 578 504 - Glu TTC [ENA]
>WENV170645287 JMSV01000021 [JMSV] bioreactor metagenome; Culture-2 Bioreactor Bmz derived from microbial biomass from the upper 2 cm of a marine 32005 32079 + Glu TTC [ENA]
>WENV170645447 JMSV01005166 [JMSV] bioreactor metagenome; Culture-2 Bioreactor Bmz derived from microbial biomass from the upper 2 cm of a marine 434 508 + Glu TTC [ENA]
>SRA1025757 SRR035085.77927 454 Sequencing (SRP001806) 284 210 - Glu TTC [SRA]
>SRA1031532 SRR035087.445479 454 Sequencing (SRP001808) 303 229 - Glu TTC [SRA]
Identical group No.654280 (3 seq.)
>WENV170571129 FLOH01000075 [FLOH] marine metagenome; water 192880 192808 - Glu TTC [ENA]
>WENV170602719 FUWD010257517 [FUWD] metagenome; unknown 380 308 - Glu TTC [ENA]
>SRA1025808 SRR035085.87302 454 Sequencing (SRP001806) 471 399 - Glu TTC [SRA]
Identical group No.654292 (3 seq.)
>WENV170612006 FUWD012480960 [FUWD] metagenome; unknown 180 254 + Glu TTC [ENA]
>SRA1025888 SRR035085.103413 454 Sequencing (SRP001806) 302 228 - Glu TTC [SRA]
>SRA1042923 SRR035091.467797 454 Sequencing (SRP001812) 140 66 - Glu TTC [SRA]
Identical group No.654324 (1 seq.)
>SRA1026156 SRR035085.154962 454 Sequencing (SRP001806) 326 252 - Glu TTC [SRA]
Identical group No.654325 (4 seq.)
>WENV170623440 FUWD013151533 [FUWD] metagenome; unknown 1012 1086 + Glu TTC [ENA]
>WENV170631707 FUWD013362492 [FUWD] metagenome; unknown 1012 1086 + Glu TTC [ENA]
>SRA1026163 SRR035085.156278 454 Sequencing (SRP001806) 88 14 - Glu TTC [SRA]
>SRA1043223 SRR035092.75882 454 Sequencing (SRP001813) 54 128 + Glu TTC [SRA]
Identical group No.654346 (2 seq.)
>SRA1026328 SRR035085.186443 454 Sequencing (SRP001806) 121 49 - Glu TTC [SRA]
>SRA1044529 SRR035092.294524 454 Sequencing (SRP001813) 299 371 + Glu TTC [SRA]
Identical group No.654374 (2 seq.)
>SRA1026502 SRR035085.217642 454 Sequencing (SRP001806) 309 381 + Glu TTC [SRA]
>SRA1044810 SRR035092.349588 454 Sequencing (SRP001813) 431 359 - Glu TTC [SRA]
Identical group No.654389 (5 seq.)
>WENV170608179 FUWD010899430 [FUWD] metagenome; unknown 79 151 + Glu TTC [ENA]
>SRA1026605 SRR035085.238828 454 Sequencing (SRP001806) 169 241 + Glu TTC [SRA]
>SRA1038890 SRR035090.389045 454 Sequencing (SRP001811) 267 195 - Glu TTC [SRA]
>SRA1049916 SRR035095.159669 454 Sequencing (SRP001816) 214 286 + Glu TTC [SRA]
>SRA1050710 SRR035095.334490 454 Sequencing (SRP001816) 214 286 + Glu TTC [SRA]
Identical group No.779799 (1 seq.)
>SRA1025801 SRR035085.86047 454 Sequencing (SRP001806) 273 346 + Glu TTC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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