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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
454 Sequencing (SRP001808)
Anticodon = TGA
HIT:
74 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.8756 (3 seq.)
>WENV170612083
FUWD012498981
[FUWD] metagenome; unknown
193
101
-
Ser
TGA
[ENA]
¢þ
>SRA1031336
SRR035087.414606
454 Sequencing (SRP001808)
193
101
-
Ser
TGA
[SRA]
>SRA1043006
SRR035092.19696
454 Sequencing (SRP001813)
208
300
+
Ser
TGA
[SRA]
Identical group No.13443 (1 seq.)
>SRA1032292
SRR035087.596876
454 Sequencing (SRP001808)
107
15
-
Ser
TGA
[SRA]
Identical group No.21414 (1 seq.)
>SRA1029207
SRR035087.92014
454 Sequencing (SRP001808)
435
344
-
Ser
TGA
[SRA]
Identical group No.21416 (6 seq.)
>WENV170607899
FUWD010869408
[FUWD] metagenome; unknown
374
465
+
Ser
TGA
[ENA]
¢þ
>SRA1029297
SRR035087.104545
454 Sequencing (SRP001808)
11
102
+
Ser
TGA
[SRA]
>SRA1029386
SRR035087.119820
454 Sequencing (SRP001808)
295
204
-
Ser
TGA
[SRA]
>SRA1044477
SRR035092.286144
454 Sequencing (SRP001813)
308
399
+
Ser
TGA
[SRA]
>SRA1048160
SRR035094.120113
454 Sequencing (SRP001815)
122
212
+
Ser
TGA
[SRA]
>SRA1048831
SRR035094.259234
454 Sequencing (SRP001815)
130
39
-
Ser
TGA
[SRA]
Identical group No.21422 (1 seq.)
>SRA1030872
SRR035087.341810
454 Sequencing (SRP001808)
309
401
+
Ser
TGA
[SRA]
Identical group No.21425 (1 seq.)
>SRA1031272
SRR035087.404304
454 Sequencing (SRP001808)
270
361
+
Ser
TGA
[SRA]
Identical group No.21433 (1 seq.)
>SRA1032018
SRR035087.533880
454 Sequencing (SRP001808)
73
164
+
Ser
TGA
[SRA]
Identical group No.21435 (2 seq.)
>SRA1032145
SRR035087.562635
454 Sequencing (SRP001808)
88
179
+
Ser
TGA
[SRA]
>SRA1033088
SRR035088.170648
454 Sequencing (SRP001809)
166
257
+
Ser
TGA
[SRA]
Identical group No.21436 (1 seq.)
>SRA1032185
SRR035087.571247
454 Sequencing (SRP001808)
162
71
-
Ser
TGA
[SRA]
Identical group No.21439 (1 seq.)
>SRA1032415
SRR035087.625795
454 Sequencing (SRP001808)
3
94
+
Ser
TGA
[SRA]
Identical group No.32926 (1 seq.)
>SRA1029311
SRR035087.107647
454 Sequencing (SRP001808)
111
21
-
Ser
TGA
[SRA]
Identical group No.32929 (1 seq.)
>SRA1029825
SRR035087.187912
454 Sequencing (SRP001808)
235
324
+
Ser
TGA
[SRA]
Identical group No.32930 (1 seq.)
>SRA1029871
SRR035087.195214
454 Sequencing (SRP001808)
361
271
-
Ser
TGA
[SRA]
Identical group No.32937 (2 seq.)
>WENV170001067
AGBJ01002230
[AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East
213
123
-
Ser
TGA
[ENA]
¢þ
>SRA1031996
SRR035087.528357
454 Sequencing (SRP001808)
282
192
-
Ser
TGA
[SRA]
Identical group No.45890 (6 seq.)
>WENV170622796
FUWD013121141
[FUWD] metagenome; unknown
1188
1101
-
Ser
TGA
[ENA]
¢þ
>WENV170631009
FUWD013334893
[FUWD] metagenome; unknown
1188
1101
-
Ser
TGA
[ENA]
¢þ
>SRA1017165
SRR035082.92167
454 Sequencing (SRP001803)
59
146
+
Ser
TGA
[SRA]
>SRA1029777
SRR035087.180138
454 Sequencing (SRP001808)
170
257
+
Ser
TGA
[SRA]
>SRA1036603
SRR035089.560196
454 Sequencing (SRP001810)
105
192
+
Ser
TGA
[SRA]
>SRA1044423
SRR035092.277058
454 Sequencing (SRP001813)
220
133
-
Ser
TGA
[SRA]
Identical group No.49583 (1 seq.)
>SRA1028786
SRR035087.6726
454 Sequencing (SRP001808)
214
125
-
Ser
TGA
[SRA]
Identical group No.49584 (1 seq.)
>SRA1028953
SRR035087.44803
454 Sequencing (SRP001808)
364
275
-
Ser
TGA
[SRA]
Identical group No.49588 (1 seq.)
>SRA1029341
SRR035087.111561
454 Sequencing (SRP001808)
104
193
+
Ser
TGA
[SRA]
Identical group No.49590 (1 seq.)
>SRA1029425
SRR035087.125422
454 Sequencing (SRP001808)
332
243
-
Ser
TGA
[SRA]
Identical group No.49603 (5 seq.)
>WENV170627114
FUWD013231456
[FUWD] metagenome; unknown
415
326
-
Ser
TGA
[ENA]
¢þ
>WENV170628994
FUWD013258121
[FUWD] metagenome; unknown
4284
4195
-
Ser
TGA
[ENA]
¢þ
>SRA1030691
SRR035087.314962
454 Sequencing (SRP001808)
193
104
-
Ser
TGA
[SRA]
>SRA1043028
SRR035092.24035
454 Sequencing (SRP001813)
454
365
-
Ser
TGA
[SRA]
>SRA1044297
SRR035092.254816
454 Sequencing (SRP001813)
111
200
+
Ser
TGA
[SRA]
Identical group No.49605 (1 seq.)
>SRA1030832
SRR035087.336298
454 Sequencing (SRP001808)
193
282
+
Ser
TGA
[SRA]
Identical group No.49609 (2 seq.)
>WENV170607974
FUWD010876667
[FUWD] metagenome; unknown
531
442
-
Ser
TGA
[ENA]
¢þ
>SRA1031299
SRR035087.407982
454 Sequencing (SRP001808)
127
216
+
Ser
TGA
[SRA]
Identical group No.49612 (1 seq.)
>SRA1031338
SRR035087.414820
454 Sequencing (SRP001808)
150
63
-
Ser
TGA
[SRA]
Identical group No.49613 (1 seq.)
>SRA1031466
SRR035087.433848
454 Sequencing (SRP001808)
50
137
+
Ser
TGA
[SRA]
Identical group No.49617 (1 seq.)
>SRA1031758
SRR035087.482720
454 Sequencing (SRP001808)
137
48
-
Ser
TGA
[SRA]
Identical group No.49620 (1 seq.)
>SRA1031877
SRR035087.502972
454 Sequencing (SRP001808)
208
295
+
Ser
TGA
[SRA]
Identical group No.49647 (1 seq.)
>SRA1031278
SRR035087.405965
454 Sequencing (SRP001808)
333
246
-
Ser
TGA
[SRA]
Identical group No.74731 (1 seq.)
>SRA1029795
SRR035087.182401
454 Sequencing (SRP001808)
203
291
+
Ser
TGA
[SRA]
Identical group No.74736 (6 seq.)
>WENV170623674
FUWD013164571
[FUWD] metagenome; unknown
670
757
+
Ser
TGA
[ENA]
¢þ
>WENV170631955
FUWD013373182
[FUWD] metagenome; unknown
670
757
+
Ser
TGA
[ENA]
¢þ
>SRA1016941
SRR035082.57050
454 Sequencing (SRP001803)
330
243
-
Ser
TGA
[SRA]
>SRA1017510
SRR035082.152071
454 Sequencing (SRP001803)
162
75
-
Ser
TGA
[SRA]
>SRA1018174
SRR035082.251467
454 Sequencing (SRP001803)
351
438
+
Ser
TGA
[SRA]
>SRA1030484
SRR035087.285563
454 Sequencing (SRP001808)
326
239
-
Ser
TGA
[SRA]
Identical group No.74753 (1 seq.)
>SRA1031984
SRR035087.525653
454 Sequencing (SRP001808)
235
150
-
Ser
TGA
[SRA]
Identical group No.74768 (2 seq.)
>WENV170613279
FUWD012793226
[FUWD] metagenome; unknown
661
573
-
Ser
TGA
[ENA]
¢þ
>SRA1031456
SRR035087.432936
454 Sequencing (SRP001808)
350
262
-
Ser
TGA
[SRA]
Identical group No.87042 (8 seq.)
>W131193753
ASOZ01000011
Atribacterota
Atribacteria bacterium JGI 0000014-F07 OP9 bacterium JGI 0000014-F07 [ASOZ]
4373
4286
-
Ser
TGA
[ENA]
¡û
>WENV170602334
FUWD010227344
[FUWD] metagenome; unknown
662
749
+
Ser
TGA
[ENA]
¢þ
>SRA1026641
SRR035085.246914
454 Sequencing (SRP001806)
177
90
-
Ser
TGA
[SRA]
>SRA1029421
SRR035087.124831
454 Sequencing (SRP001808)
99
12
-
Ser
TGA
[SRA]
>SRA1048242
SRR035094.133372
454 Sequencing (SRP001815)
91
178
+
Ser
TGA
[SRA]
>SRA1048422
SRR035094.169752
454 Sequencing (SRP001815)
91
178
+
Ser
TGA
[SRA]
>W1510076774
CDPL01000020
Atribacterota
Atribacteria bacterium JGI 0000014-F07 [CDPL]
5546
5633
+
Ser
TGA
[ENA]
¡û
>W1510076786
CDPL01000121
Atribacterota
Atribacteria bacterium JGI 0000014-F07 [CDPL]
1769
1682
-
Ser
TGA
[ENA]
¡û
Identical group No.87053 (60 seq.)
>WENV182540375
OJAJ01000007
[OJAJ] seawater metagenome; Sea water
11509
11596
+
Ser
TGA
[ENA]
¢þ
>WENV182540944
OJAQ01000675
[OJAQ] seawater metagenome; Sea water
382
469
+
Ser
TGA
[ENA]
¢þ
>WENV182542802
OJAZ01002756
[OJAZ] seawater metagenome; Sea water
2336
2249
-
Ser
TGA
[ENA]
¢þ
>WENV182544242
OJBF01000062
[OJBF] seawater metagenome; Sea water
1022
935
-
Ser
TGA
[ENA]
¢þ
>WENV182544980
OJBL01001489
[OJBL] seawater metagenome; Sea water
1031
1118
+
Ser
TGA
[ENA]
¢þ
>WENV182550111
OJBZ01003572
[OJBZ] seawater metagenome; Sea water
1131
1044
-
Ser
TGA
[ENA]
¢þ
>WENV182553329
OJCR01001648
[OJCR] seawater metagenome; Sea water
1719
1632
-
Ser
TGA
[ENA]
¢þ
>WENV182554146
OJCT01003712
[OJCT] seawater metagenome; Sea water
1498
1411
-
Ser
TGA
[ENA]
¢þ
>WENV182557060
OJDI01000615
[OJDI] seawater metagenome; Sea water
9585
9672
+
Ser
TGA
[ENA]
¢þ
>WENV182558435
OJDM01002519
[OJDM] seawater metagenome; Sea water
1340
1253
-
Ser
TGA
[ENA]
¢þ
>WENV182561569
OJDX01000003
[OJDX] seawater metagenome; Sea water
4361
4274
-
Ser
TGA
[ENA]
¢þ
>WENV182561904
OJDY01000003
[OJDY] seawater metagenome; Sea water
4529
4442
-
Ser
TGA
[ENA]
¢þ
>WENV182562709
OJEA01000341
[OJEA] seawater metagenome; Sea water
725
812
+
Ser
TGA
[ENA]
¢þ
>WENV182563038
OJEB01000007
[OJEB] seawater metagenome; Sea water
54303
54390
+
Ser
TGA
[ENA]
¢þ
>WENV182564021
OJEE01000003
[OJEE] seawater metagenome; Sea water
128470
128557
+
Ser
TGA
[ENA]
¢þ
>WENV182568996
OJEY01000006
[OJEY] seawater metagenome; Sea water
3859
3772
-
Ser
TGA
[ENA]
¢þ
>WENV182569780
OJFB01000505
[OJFB] seawater metagenome; Sea water
6226
6313
+
Ser
TGA
[ENA]
¢þ
>WENV182571149
OJFG01000714
[OJFG] seawater metagenome; Sea water
2978
3065
+
Ser
TGA
[ENA]
¢þ
>WENV182574564
OJFS01000026
[OJFS] seawater metagenome; Sea water
91756
91843
+
Ser
TGA
[ENA]
¢þ
>WENV182575824
OJFW01004630
[OJFW] seawater metagenome; Sea water
147
60
-
Ser
TGA
[ENA]
¢þ
>WENV182576595
OJFY01000389
[OJFY] seawater metagenome; Sea water
4026
4113
+
Ser
TGA
[ENA]
¢þ
>WENV182577958
OJGM01000106
[OJGM] seawater metagenome; Sea water
4486
4399
-
Ser
TGA
[ENA]
¢þ
>WENV182580739
OJGW01010241
[OJGW] seawater metagenome; Sea water
952
865
-
Ser
TGA
[ENA]
¢þ
>WENV182582077
OJHA01000003
[OJHA] seawater metagenome; Sea water
8112
8025
-
Ser
TGA
[ENA]
¢þ
>WENV182582392
OJHB01000027
[OJHB] seawater metagenome; Sea water
26443
26530
+
Ser
TGA
[ENA]
¢þ
>WENV182583258
OJHD01001589
[OJHD] seawater metagenome; Sea water
1810
1723
-
Ser
TGA
[ENA]
¢þ
>WENV182584810
OJHG01012807
[OJHG] seawater metagenome; Sea water
1308
1221
-
Ser
TGA
[ENA]
¢þ
>WENV182586700
OJHK01003251
[OJHK] seawater metagenome; Sea water
3079
3166
+
Ser
TGA
[ENA]
¢þ
>WENV182587522
OJHN01000001
[OJHN] seawater metagenome; Sea water
3859
3772
-
Ser
TGA
[ENA]
¢þ
>WENV182592413
OJIR01000446
[OJIR] seawater metagenome; Sea water
3883
3796
-
Ser
TGA
[ENA]
¢þ
>WENV183053658
OLGP01000455
[OLGP] seawater metagenome; Sea water
559
646
+
Ser
TGA
[ENA]
¢þ
>WENV183054509
OLGU01000006
[OLGU] seawater metagenome; Sea water
91733
91820
+
Ser
TGA
[ENA]
¢þ
>WENV183059008
OLHS01000957
[OLHS] seawater metagenome; Sea water
1884
1971
+
Ser
TGA
[ENA]
¢þ
>WENV183059254
OLHU01000123
[OLHU] seawater metagenome; Sea water
9661
9748
+
Ser
TGA
[ENA]
¢þ
>WENV183060163
OLHX01000004
[OLHX] seawater metagenome; Sea water
1568
1481
-
Ser
TGA
[ENA]
¢þ
>WENV183061025
OLHY01028524
[OLHY] seawater metagenome; Sea water
268
181
-
Ser
TGA
[ENA]
¢þ
>WENV170572382
FLOH01000798
[FLOH] marine metagenome; water
3217
3130
-
Ser
TGA
[ENA]
¢þ
>WENV170626703
FUWD013228992
[FUWD] metagenome; unknown
16661
16748
+
Ser
TGA
[ENA]
¢þ
>WENV170627190
FUWD013231977
[FUWD] metagenome; unknown
4051
4138
+
Ser
TGA
[ENA]
¢þ
>WENV170627193
FUWD013231978
[FUWD] metagenome; unknown
2901
2988
+
Ser
TGA
[ENA]
¢þ
>WENV170627218
FUWD013232108
[FUWD] metagenome; unknown
1487
1400
-
Ser
TGA
[ENA]
¢þ
>WENV170628124
FUWD013242293
[FUWD] metagenome; unknown
47957
48044
+
Ser
TGA
[ENA]
¢þ
>WENV170632555
FUWD013384438
[FUWD] metagenome; unknown
4051
4138
+
Ser
TGA
[ENA]
¢þ
>WENV170632558
FUWD013384439
[FUWD] metagenome; unknown
2901
2988
+
Ser
TGA
[ENA]
¢þ
>WENV170632928
FUWD013388836
[FUWD] metagenome; unknown
1487
1400
-
Ser
TGA
[ENA]
¢þ
>WENV170953745
MEHZ011662070
[MEHZ] marine metagenome; marine surface water
3946
4033
+
Ser
TGA
[ENA]
¢þ
>SRA1018907
SRR035082.368176
454 Sequencing (SRP001803)
101
14
-
Ser
TGA
[SRA]
>SRA1019256
SRR035082.424415
454 Sequencing (SRP001803)
149
62
-
Ser
TGA
[SRA]
>SRA1031910
SRR035087.510466
454 Sequencing (SRP001808)
109
196
+
Ser
TGA
[SRA]
>SRA1034334
SRR035089.60253
454 Sequencing (SRP001810)
67
154
+
Ser
TGA
[SRA]
>SRA1034674
SRR035089.148602
454 Sequencing (SRP001810)
459
372
-
Ser
TGA
[SRA]
>SRA1035146
SRR035089.245811
454 Sequencing (SRP001810)
461
374
-
Ser
TGA
[SRA]
>SRA1046820
SRR035093.393119
454 Sequencing (SRP001814)
259
346
+
Ser
TGA
[SRA]
>SRA1051714
SRR035098.63162
454 Sequencing (SRP001819)
158
245
+
Ser
TGA
[SRA]
>SRA1052143
SRR035098.148867
454 Sequencing (SRP001819)
83
170
+
Ser
TGA
[SRA]
>SRA1052505
SRR035098.216429
454 Sequencing (SRP001819)
149
236
+
Ser
TGA
[SRA]
>SRA1053014
SRR035098.318399
454 Sequencing (SRP001819)
299
212
-
Ser
TGA
[SRA]
>SRA1053148
SRR035098.347987
454 Sequencing (SRP001819)
92
5
-
Ser
TGA
[SRA]
>SRA1053578
SRR035098.442911
454 Sequencing (SRP001819)
199
112
-
Ser
TGA
[SRA]
>SRA1053796
SRR035098.497813
454 Sequencing (SRP001819)
92
5
-
Ser
TGA
[SRA]
Identical group No.87094 (14 seq.)
>C171072569
CP018091
Cyanobacteriota
Synechococcus sp. SynAce01 [CP018091]
695337
695423
+
Ser
TGA
-
¡û
>WENV170614935
FUWD012844721
[FUWD] metagenome; unknown
5246
5332
+
Ser
TGA
[ENA]
¢þ
>SRA1028253
SRR035086.285748
454 Sequencing (SRP001807)
28
114
+
Ser
TGA
[SRA]
>SRA1028730
SRR035086.412244
454 Sequencing (SRP001807)
135
49
-
Ser
TGA
[SRA]
>SRA1032279
SRR035087.594065
454 Sequencing (SRP001808)
96
10
-
Ser
TGA
[SRA]
>SRA1032544
SRR035088.42863
454 Sequencing (SRP001809)
120
34
-
Ser
TGA
[SRA]
>SRA1036195
SRR035089.467204
454 Sequencing (SRP001810)
228
142
-
Ser
TGA
[SRA]
>SRA1048210
SRR035094.129218
454 Sequencing (SRP001815)
175
89
-
Ser
TGA
[SRA]
>SRA1048256
SRR035094.135541
454 Sequencing (SRP001815)
53
139
+
Ser
TGA
[SRA]
>SRA1051800
SRR035098.78842
454 Sequencing (SRP001819)
115
29
-
Ser
TGA
[SRA]
>SRA1052111
SRR035098.143326
454 Sequencing (SRP001819)
333
247
-
Ser
TGA
[SRA]
>SRA1052894
SRR035098.295545
454 Sequencing (SRP001819)
218
132
-
Ser
TGA
[SRA]
>SRA1053224
SRR035098.364226
454 Sequencing (SRP001819)
100
14
-
Ser
TGA
[SRA]
>SRA1053700
SRR035098.470009
454 Sequencing (SRP001819)
50
136
+
Ser
TGA
[SRA]
Identical group No.90532 (1 seq.)
>SRA1029016
SRR035087.58845
454 Sequencing (SRP001808)
98
185
+
Ser
TGA
[SRA]
Identical group No.90535 (17 seq.)
>W131162449
AQYX01000130
Atribacterota
Atribacteria bacterium SCGC AAA252-M02 OP9 bacterium SCGC AAA252-M02 [AQYX]
621
708
+
Ser
TGA
[ENA]
¡û
>W131193789
ASPB01000020
Atribacterota
Atribacteria bacterium SCGC AB-164-D21 OP9 bacterium SCGC AB-164-D21 [ASPB]
17888
17801
-
Ser
TGA
[ENA]
¡û
>W141139553
AWNT01000053
Atribacterota
Atribacteria bacterium JGI OTU-1 [AWNT]
621
708
+
Ser
TGA
[ENA]
¡û
>WENV183513893
OMKS01008945
[OMKS] sediment metagenome; hot spring sediment
5892
5979
+
Ser
TGA
[ENA]
¢þ
>WENV170017181
BART01000292
[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
777
864
+
Ser
TGA
[ENA]
¢þ
>WENV170017837
BARU01031147
[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
118
31
-
Ser
TGA
[ENA]
¢þ
>WENV170625716
FUWD013204004
[FUWD] metagenome; unknown
1851
1764
-
Ser
TGA
[ENA]
¢þ
>WENV170633938
FUWD013405970
[FUWD] metagenome; unknown
1851
1764
-
Ser
TGA
[ENA]
¢þ
>WENV170677060
LDZT01001361
[LDZT] terrestrial metagenome; oil reservoir sample SB1
864
951
+
Ser
TGA
[ENA]
¢þ
>WENV170677593
LDZT01007218
[LDZT] terrestrial metagenome; oil reservoir sample SB1
1019
1106
+
Ser
TGA
[ENA]
¢þ
>WENV170678051
LDZT01010699
[LDZT] terrestrial metagenome; oil reservoir sample SB1
42207
42294
+
Ser
TGA
[ENA]
¢þ
>WENV170679160
LDZU01008743
[LDZU] terrestrial metagenome; oil reservoir sample SB2
65138
65051
-
Ser
TGA
[ENA]
¢þ
>WENV170698518
LGVF01352793
[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
2098
2185
+
Ser
TGA
[ENA]
¢þ
>WENV170699275
LGVF01519049
[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
275
362
+
Ser
TGA
[ENA]
¢þ
>W1910702399
MEYH01000064
Atribacterota
Candidatus Atribacteria bacterium RBG_19FT_COMBO_35_14 [MEYH]
638
551
-
Ser
TGA
[ENA]
¡û
>SRA1029121
SRR035087.77881
454 Sequencing (SRP001808)
258
171
-
Ser
TGA
[SRA]
>SRA1050469
SRR035095.269553
454 Sequencing (SRP001816)
491
404
-
Ser
TGA
[SRA]
Identical group No.90537 (3 seq.)
>WENV170611972
FUWD012471656
[FUWD] metagenome; unknown
164
251
+
Ser
TGA
[ENA]
¢þ
>SRA1029246
SRR035087.96791
454 Sequencing (SRP001808)
164
251
+
Ser
TGA
[SRA]
>SRA1030718
SRR035087.319152
454 Sequencing (SRP001808)
167
80
-
Ser
TGA
[SRA]
Identical group No.90547 (1 seq.)
>SRA1029679
SRR035087.162601
454 Sequencing (SRP001808)
348
263
-
Ser
TGA
[SRA]
Identical group No.90555 (1 seq.)
>SRA1029888
SRR035087.197253
454 Sequencing (SRP001808)
111
198
+
Ser
TGA
[SRA]
Identical group No.90560 (1 seq.)
>SRA1030133
SRR035087.231996
454 Sequencing (SRP001808)
87
174
+
Ser
TGA
[SRA]
Identical group No.90561 (1 seq.)
>SRA1030257
SRR035087.250782
454 Sequencing (SRP001808)
108
23
-
Ser
TGA
[SRA]
Identical group No.90562 (1 seq.)
>SRA1030394
SRR035087.273809
454 Sequencing (SRP001808)
166
79
-
Ser
TGA
[SRA]
Identical group No.90565 (1 seq.)
>SRA1030463
SRR035087.282017
454 Sequencing (SRP001808)
275
361
+
Ser
TGA
[SRA]
Identical group No.90568 (1 seq.)
>SRA1030586
SRR035087.300774
454 Sequencing (SRP001808)
141
54
-
Ser
TGA
[SRA]
Identical group No.90570 (3 seq.)
>WENV170608226
FUWD010904410
[FUWD] metagenome; unknown
17
104
+
Ser
TGA
[ENA]
¢þ
>SRA1030649
SRR035087.309308
454 Sequencing (SRP001808)
151
236
+
Ser
TGA
[SRA]
>SRA1031502
SRR035087.440036
454 Sequencing (SRP001808)
155
240
+
Ser
TGA
[SRA]
Identical group No.90578 (1 seq.)
>SRA1030893
SRR035087.343741
454 Sequencing (SRP001808)
159
246
+
Ser
TGA
[SRA]
Identical group No.90583 (1 seq.)
>SRA1031260
SRR035087.401815
454 Sequencing (SRP001808)
162
249
+
Ser
TGA
[SRA]
Identical group No.90591 (1 seq.)
>SRA1031704
SRR035087.474267
454 Sequencing (SRP001808)
356
443
+
Ser
TGA
[SRA]
Identical group No.90593 (1 seq.)
>SRA1031763
SRR035087.483987
454 Sequencing (SRP001808)
91
4
-
Ser
TGA
[SRA]
Identical group No.90607 (1 seq.)
>SRA1032323
SRR035087.605080
454 Sequencing (SRP001808)
216
129
-
Ser
TGA
[SRA]
Identical group No.90608 (3 seq.)
>W1711796926
MWQY01000012
Spirochaetota
Marispirochaeta aestuarii sp. JC444 [MWQY]
26752
26666
-
Ser
TGA
[ENA]
¡û
>SRA1032369
SRR035087.614476
454 Sequencing (SRP001808)
267
183
-
Ser
TGA
[SRA]
>W1710652167
JWTM01000541
Spirochaetota
Candidatus Marispirochaeta associata [JWTM]
35945
35859
-
Ser
TGA
[ENA]
¡û
Identical group No.118291 (1 seq.)
>SRA1029035
SRR035087.62463
454 Sequencing (SRP001808)
113
26
-
Ser
TGA
[SRA]
Identical group No.118311 (1 seq.)
>SRA1029788
SRR035087.181194
454 Sequencing (SRP001808)
103
17
-
Ser
TGA
[SRA]
Identical group No.118313 (1 seq.)
>SRA1029858
SRR035087.192905
454 Sequencing (SRP001808)
472
386
-
Ser
TGA
[SRA]
Identical group No.118325 (1 seq.)
>SRA1030075
SRR035087.224421
454 Sequencing (SRP001808)
337
251
-
Ser
TGA
[SRA]
Identical group No.118341 (2 seq.)
>WENV170719179
LSQX01104744
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
11241
11325
+
Ser
TGA
[ENA]
¢þ
>SRA1030921
SRR035087.348791
454 Sequencing (SRP001808)
205
288
+
Ser
TGA
[SRA]
Identical group No.118345 (1 seq.)
>SRA1031004
SRR035087.359115
454 Sequencing (SRP001808)
141
56
-
Ser
TGA
[SRA]
Identical group No.118351 (1 seq.)
>SRA1031157
SRR035087.381759
454 Sequencing (SRP001808)
219
303
+
Ser
TGA
[SRA]
Identical group No.118352 (1 seq.)
>SRA1031162
SRR035087.382682
454 Sequencing (SRP001808)
3
89
+
Ser
TGA
[SRA]
Identical group No.118359 (3 seq.)
>WENV170623024
FUWD013133400
[FUWD] metagenome; unknown
445
529
+
Ser
TGA
[ENA]
¢þ
>WENV170631259
FUWD013346480
[FUWD] metagenome; unknown
445
529
+
Ser
TGA
[ENA]
¢þ
>SRA1031404
SRR035087.424445
454 Sequencing (SRP001808)
446
362
-
Ser
TGA
[SRA]
Identical group No.118364 (1 seq.)
>SRA1031539
SRR035087.446556
454 Sequencing (SRP001808)
416
331
-
Ser
TGA
[SRA]
Identical group No.118382 (1 seq.)
>SRA1032014
SRR035087.532018
454 Sequencing (SRP001808)
247
161
-
Ser
TGA
[SRA]
Identical group No.153843 (24 seq.)
>W131157563
AQSK01000206
Unclassified
Cloacimonetes bacterium SCGC AAA252-E13 KSB1 bacterium SCGC AAA252-E13 [AQSK]
33832
33917
+
Ser
TGA
[ENA]
¡û
>W131157628
AQSM01000150
Unclassified
Cloacimonetes bacterium SCGC AAA252-N14 KSB1 bacterium SCGC AAA252-N14 [AQSM]
467
382
-
Ser
TGA
[ENA]
¡û
>W131192171
ASKQ01000029
Unclassified
Cloacimonetes bacterium SCGC AAA252-O17 KSB1 bacterium SCGC AAA252-O17 [ASKQ]
385
300
-
Ser
TGA
[ENA]
¡û
>W131192939
ASNH01000025
Unclassified
Cloacimonetes bacterium SCGC AAA255-C20 KSB1 bacterium SCGC AAA255-C20 [ASNH]
6854
6939
+
Ser
TGA
[ENA]
¡û
>W131192984
ASNI01000022
Unclassified
Cloacimonetes bacterium SCGC AAA252-N17 KSB1 bacterium SCGC AAA252-N17 [ASNI]
8776
8691
-
Ser
TGA
[ENA]
¡û
>W131193058
ASNM01000043
Unclassified
Cloacimonetes bacterium SCGC AAA252-G08 KSB1 bacterium SCGC AAA252-G08 [ASNM]
13224
13309
+
Ser
TGA
[ENA]
¡û
>W131193140
ASNQ01000022
Unclassified
Cloacimonetes bacterium SCGC AAA252-K16 KSB1 bacterium SCGC AAA252-K16 [ASNQ]
9424
9339
-
Ser
TGA
[ENA]
¡û
>W131193197
ASNT01000035
Unclassified
Cloacimonetes bacterium SCGC AAA252-P10 KSB1 bacterium SCGC AAA252-P10 [ASNT]
16869
16954
+
Ser
TGA
[ENA]
¡û
>W141139673
AWNX01000008
Unclassified
Cloacimonetes bacterium JGI OTU-1 [AWNX]
4729
4644
-
Ser
TGA
[ENA]
¡û
>WENV170600993
FUWD010151907
[FUWD] metagenome; unknown
814
729
-
Ser
TGA
[ENA]
¢þ
>WENV170625242
FUWD013193950
[FUWD] metagenome; unknown
5080
4995
-
Ser
TGA
[ENA]
¢þ
>WENV170625246
FUWD013193951
[FUWD] metagenome; unknown
143
58
-
Ser
TGA
[ENA]
¢þ
>WENV170633487
FUWD013396907
[FUWD] metagenome; unknown
5080
4995
-
Ser
TGA
[ENA]
¢þ
>WENV170633491
FUWD013396908
[FUWD] metagenome; unknown
143
58
-
Ser
TGA
[ENA]
¢þ
>SRA1025629
SRR035085.53463
454 Sequencing (SRP001806)
36
121
+
Ser
TGA
[SRA]
>SRA1026167
SRR035085.157123
454 Sequencing (SRP001806)
201
286
+
Ser
TGA
[SRA]
>SRA1030331
SRR035087.264545
454 Sequencing (SRP001808)
340
255
-
Ser
TGA
[SRA]
>SRA1031462
SRR035087.433744
454 Sequencing (SRP001808)
296
211
-
Ser
TGA
[SRA]
>SRA1032098
SRR035087.552143
454 Sequencing (SRP001808)
188
273
+
Ser
TGA
[SRA]
>SRA1032864
SRR035088.118836
454 Sequencing (SRP001809)
483
398
-
Ser
TGA
[SRA]
>SRA1033581
SRR035088.293464
454 Sequencing (SRP001809)
172
257
+
Ser
TGA
[SRA]
>SRA1033713
SRR035088.334285
454 Sequencing (SRP001809)
44
129
+
Ser
TGA
[SRA]
>SRA1033776
SRR035088.351273
454 Sequencing (SRP001809)
278
363
+
Ser
TGA
[SRA]
>SRA1050209
SRR035095.212599
454 Sequencing (SRP001816)
101
16
-
Ser
TGA
[SRA]
Identical group No.153853 (77 seq.)
>C005323
CP000108
Chlorobiota
Chlorobium chlorochromatii [CP000108]
570415
570333
-
Ser
TGA
[Ensembl]
¡û
>C018270
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
1190073
1189991
-
Ser
TGA
[Ensembl]
¡û
>WENV170613664
FUWD012815692
[FUWD] metagenome; unknown
1122
1205
+
Ser
TGA
[ENA]
¢þ
>W09103366
AAJD01000012
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
2592
2509
-
Ser
TGA
[ENA]
¡û
>SRA1018543
SRR035082.307913
454 Sequencing (SRP001803)
111
28
-
Ser
TGA
[SRA]
>SRA1020077
SRR035083.54387
454 Sequencing (SRP001804)
93
10
-
Ser
TGA
[SRA]
>SRA1020315
SRR035083.95829
454 Sequencing (SRP001804)
42
125
+
Ser
TGA
[SRA]
>SRA1020333
SRR035083.98303
454 Sequencing (SRP001804)
208
125
-
Ser
TGA
[SRA]
>SRA1020420
SRR035083.112053
454 Sequencing (SRP001804)
91
8
-
Ser
TGA
[SRA]
>SRA1020511
SRR035083.127693
454 Sequencing (SRP001804)
206
123
-
Ser
TGA
[SRA]
>SRA1020618
SRR035083.141439
454 Sequencing (SRP001804)
42
125
+
Ser
TGA
[SRA]
>SRA1020676
SRR035083.151027
454 Sequencing (SRP001804)
113
196
+
Ser
TGA
[SRA]
>SRA1020731
SRR035083.156910
454 Sequencing (SRP001804)
260
343
+
Ser
TGA
[SRA]
>SRA1021004
SRR035083.196152
454 Sequencing (SRP001804)
246
329
+
Ser
TGA
[SRA]
>SRA1021133
SRR035083.213223
454 Sequencing (SRP001804)
170
253
+
Ser
TGA
[SRA]
>SRA1021195
SRR035083.222248
454 Sequencing (SRP001804)
43
126
+
Ser
TGA
[SRA]
>SRA1021243
SRR035083.227941
454 Sequencing (SRP001804)
239
156
-
Ser
TGA
[SRA]
>SRA1021245
SRR035083.228190
454 Sequencing (SRP001804)
92
175
+
Ser
TGA
[SRA]
>SRA1021287
SRR035083.237016
454 Sequencing (SRP001804)
239
156
-
Ser
TGA
[SRA]
>SRA1021498
SRR035083.266198
454 Sequencing (SRP001804)
206
123
-
Ser
TGA
[SRA]
>SRA1021580
SRR035083.275748
454 Sequencing (SRP001804)
371
454
+
Ser
TGA
[SRA]
>SRA1021664
SRR035083.290010
454 Sequencing (SRP001804)
136
53
-
Ser
TGA
[SRA]
>SRA1021811
SRR035083.312690
454 Sequencing (SRP001804)
14
97
+
Ser
TGA
[SRA]
>SRA1021853
SRR035083.317812
454 Sequencing (SRP001804)
124
41
-
Ser
TGA
[SRA]
>SRA1021885
SRR035083.324145
454 Sequencing (SRP001804)
104
187
+
Ser
TGA
[SRA]
>SRA1021935
SRR035083.329251
454 Sequencing (SRP001804)
135
218
+
Ser
TGA
[SRA]
>SRA1021953
SRR035083.331676
454 Sequencing (SRP001804)
239
156
-
Ser
TGA
[SRA]
>SRA1022037
SRR035083.342775
454 Sequencing (SRP001804)
115
32
-
Ser
TGA
[SRA]
>SRA1022083
SRR035083.349811
454 Sequencing (SRP001804)
14
97
+
Ser
TGA
[SRA]
>SRA1022184
SRR035083.365110
454 Sequencing (SRP001804)
14
97
+
Ser
TGA
[SRA]
>SRA1022230
SRR035083.371262
454 Sequencing (SRP001804)
41
124
+
Ser
TGA
[SRA]
>SRA1022247
SRR035083.374137
454 Sequencing (SRP001804)
155
72
-
Ser
TGA
[SRA]
>SRA1022321
SRR035083.389183
454 Sequencing (SRP001804)
14
97
+
Ser
TGA
[SRA]
>SRA1022504
SRR035083.415272
454 Sequencing (SRP001804)
14
97
+
Ser
TGA
[SRA]
>SRA1022507
SRR035083.415663
454 Sequencing (SRP001804)
124
41
-
Ser
TGA
[SRA]
>SRA1022531
SRR035083.421688
454 Sequencing (SRP001804)
36
119
+
Ser
TGA
[SRA]
>SRA1022563
SRR035083.424735
454 Sequencing (SRP001804)
79
162
+
Ser
TGA
[SRA]
>SRA1022589
SRR035083.429299
454 Sequencing (SRP001804)
128
45
-
Ser
TGA
[SRA]
>SRA1022791
SRR035083.461356
454 Sequencing (SRP001804)
14
97
+
Ser
TGA
[SRA]
>SRA1022867
SRR035083.476091
454 Sequencing (SRP001804)
173
256
+
Ser
TGA
[SRA]
>SRA1022892
SRR035083.480011
454 Sequencing (SRP001804)
36
119
+
Ser
TGA
[SRA]
>SRA1022944
SRR035083.492741
454 Sequencing (SRP001804)
72
155
+
Ser
TGA
[SRA]
>SRA1022973
SRR035083.498861
454 Sequencing (SRP001804)
127
44
-
Ser
TGA
[SRA]
>SRA1026023
SRR035085.128543
454 Sequencing (SRP001806)
163
80
-
Ser
TGA
[SRA]
>SRA1028909
SRR035087.36046
454 Sequencing (SRP001808)
93
10
-
Ser
TGA
[SRA]
>SRA1029881
SRR035087.195688
454 Sequencing (SRP001808)
94
11
-
Ser
TGA
[SRA]
>SRA1031977
SRR035087.524255
454 Sequencing (SRP001808)
356
273
-
Ser
TGA
[SRA]
>SRA1033692
SRR035088.326312
454 Sequencing (SRP001809)
119
202
+
Ser
TGA
[SRA]
>SRA1033916
SRR035088.405934
454 Sequencing (SRP001809)
197
280
+
Ser
TGA
[SRA]
>SRA1035845
SRR035089.387519
454 Sequencing (SRP001810)
395
478
+
Ser
TGA
[SRA]
>SRA1036833
SRR035090.20100
454 Sequencing (SRP001811)
72
155
+
Ser
TGA
[SRA]
>SRA1036871
SRR035090.29678
454 Sequencing (SRP001811)
414
497
+
Ser
TGA
[SRA]
>SRA1037178
SRR035090.88136
454 Sequencing (SRP001811)
61
144
+
Ser
TGA
[SRA]
>SRA1037469
SRR035090.138329
454 Sequencing (SRP001811)
75
158
+
Ser
TGA
[SRA]
>SRA1037492
SRR035090.142333
454 Sequencing (SRP001811)
422
505
+
Ser
TGA
[SRA]
>SRA1037640
SRR035090.166947
454 Sequencing (SRP001811)
69
152
+
Ser
TGA
[SRA]
>SRA1037652
SRR035090.169756
454 Sequencing (SRP001811)
69
152
+
Ser
TGA
[SRA]
>SRA1037815
SRR035090.200872
454 Sequencing (SRP001811)
244
161
-
Ser
TGA
[SRA]
>SRA1038053
SRR035090.239510
454 Sequencing (SRP001811)
71
154
+
Ser
TGA
[SRA]
>SRA1038060
SRR035090.240978
454 Sequencing (SRP001811)
125
42
-
Ser
TGA
[SRA]
>SRA1038213
SRR035090.266097
454 Sequencing (SRP001811)
156
73
-
Ser
TGA
[SRA]
>SRA1038258
SRR035090.275257
454 Sequencing (SRP001811)
147
64
-
Ser
TGA
[SRA]
>SRA1038477
SRR035090.313059
454 Sequencing (SRP001811)
312
395
+
Ser
TGA
[SRA]
>SRA1038596
SRR035090.333358
454 Sequencing (SRP001811)
69
152
+
Ser
TGA
[SRA]
>SRA1038802
SRR035090.369478
454 Sequencing (SRP001811)
291
374
+
Ser
TGA
[SRA]
>SRA1038808
SRR035090.370924
454 Sequencing (SRP001811)
170
253
+
Ser
TGA
[SRA]
>SRA1038858
SRR035090.381487
454 Sequencing (SRP001811)
170
253
+
Ser
TGA
[SRA]
>SRA1038898
SRR035090.390712
454 Sequencing (SRP001811)
55
138
+
Ser
TGA
[SRA]
>SRA1039449
SRR035090.494821
454 Sequencing (SRP001811)
40
123
+
Ser
TGA
[SRA]
>SRA1039456
SRR035090.496129
454 Sequencing (SRP001811)
61
144
+
Ser
TGA
[SRA]
>SRA1039519
SRR035090.507904
454 Sequencing (SRP001811)
10
93
+
Ser
TGA
[SRA]
>SRA1039786
SRR035090.568998
454 Sequencing (SRP001811)
350
433
+
Ser
TGA
[SRA]
>SRA1045644
SRR035093.140663
454 Sequencing (SRP001814)
150
67
-
Ser
TGA
[SRA]
>SRA1050563
SRR035095.293448
454 Sequencing (SRP001816)
193
276
+
Ser
TGA
[SRA]
>SRA1054167
SRR035099.74429
454 Sequencing (SRP001820)
423
340
-
Ser
TGA
[SRA]
>SRA1054198
SRR035099.81380
454 Sequencing (SRP001820)
423
340
-
Ser
TGA
[SRA]
>SRA1054236
SRR035099.90380
454 Sequencing (SRP001820)
152
69
-
Ser
TGA
[SRA]
Identical group No.153915 (15 seq.)
>WENV183512218
OMKS01000147
[OMKS] sediment metagenome; hot spring sediment
41868
41953
+
Ser
TGA
[ENA]
¢þ
>WENV183513112
OMKS01002776
[OMKS] sediment metagenome; hot spring sediment
4514
4429
-
Ser
TGA
[ENA]
¢þ
>WENV170619645
FUWD013018439
[FUWD] metagenome; unknown
1375
1460
+
Ser
TGA
[ENA]
¢þ
>WENV170619689
FUWD013019112
[FUWD] metagenome; unknown
161
246
+
Ser
TGA
[ENA]
¢þ
>WENV170624190
FUWD013177246
[FUWD] metagenome; unknown
280
195
-
Ser
TGA
[ENA]
¢þ
>WENV170627752
FUWD013236893
[FUWD] metagenome; unknown
1375
1460
+
Ser
TGA
[ENA]
¢þ
>WENV170632473
FUWD013383052
[FUWD] metagenome; unknown
280
195
-
Ser
TGA
[ENA]
¢þ
>SRA1031632
SRR035087.462537
454 Sequencing (SRP001808)
6
91
+
Ser
TGA
[SRA]
>SRA1032138
SRR035087.560450
454 Sequencing (SRP001808)
366
281
-
Ser
TGA
[SRA]
>SRA1036265
SRR035089.483055
454 Sequencing (SRP001810)
352
267
-
Ser
TGA
[SRA]
>SRA1036755
SRR035089.607301
454 Sequencing (SRP001810)
18
103
+
Ser
TGA
[SRA]
>SRA1047809
SRR035094.45770
454 Sequencing (SRP001815)
250
165
-
Ser
TGA
[SRA]
>SRA1048686
SRR035094.227746
454 Sequencing (SRP001815)
201
286
+
Ser
TGA
[SRA]
>SRA1050060
SRR035095.185315
454 Sequencing (SRP001816)
433
348
-
Ser
TGA
[SRA]
>SRA1050345
SRR035095.241610
454 Sequencing (SRP001816)
130
215
+
Ser
TGA
[SRA]
Identical group No.157491 (1 seq.)
>SRA1029619
SRR035087.152120
454 Sequencing (SRP001808)
93
178
+
Ser
TGA
[SRA]
Identical group No.157500 (1 seq.)
>SRA1030363
SRR035087.268202
454 Sequencing (SRP001808)
268
353
+
Ser
TGA
[SRA]
Identical group No.157518 (2 seq.)
>WENV170611617
FUWD012358307
[FUWD] metagenome; unknown
100
15
-
Ser
TGA
[ENA]
¢þ
>SRA1031166
SRR035087.383274
454 Sequencing (SRP001808)
96
181
+
Ser
TGA
[SRA]
Identical group No.219662 (1 seq.)
>SRA1030154
SRR035087.234704
454 Sequencing (SRP001808)
12
94
+
Ser
TGA
[SRA]
Identical group No.219664 (1 seq.)
>SRA1032163
SRR035087.566320
454 Sequencing (SRP001808)
399
317
-
Ser
TGA
[SRA]
Identical group No.228585 (4 seq.)
>WENV170607672
FUWD010846992
[FUWD] metagenome; unknown
203
284
+
Ser
TGA
[ENA]
¢þ
>SRA1017586
SRR035082.164037
454 Sequencing (SRP001803)
255
336
+
Ser
TGA
[SRA]
>SRA1029602
SRR035087.150370
454 Sequencing (SRP001808)
188
107
-
Ser
TGA
[SRA]
>SRA1035586
SRR035089.335254
454 Sequencing (SRP001810)
20
101
+
Ser
TGA
[SRA]
Identical group No.229252 (1 seq.)
>SRA1029528
SRR035087.141963
454 Sequencing (SRP001808)
57
138
+
Ser
TGA
[SRA]
Identical group No.229258 (5 seq.)
>WENV170608107
FUWD010894070
[FUWD] metagenome; unknown
18
99
+
Ser
TGA
[ENA]
¢þ
>SRA1031815
SRR035087.494012
454 Sequencing (SRP001808)
227
148
-
Ser
TGA
[SRA]
>SRA1040797
SRR035091.151272
454 Sequencing (SRP001812)
19
98
+
Ser
TGA
[SRA]
>SRA1049439
SRR035095.78099
454 Sequencing (SRP001816)
328
247
-
Ser
TGA
[SRA]
>SRA1049591
SRR035095.100149
454 Sequencing (SRP001816)
331
250
-
Ser
TGA
[SRA]
Identical group No.788103 (1 seq.)
>SRA1030239
SRR035087.247625
454 Sequencing (SRP001808)
187
112
-
Ser
TGA
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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