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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170551714
CXWJ01018886
190929
Actinomycetota
GTC
Asp
>WENV170552342
CXWJ01057058
46779
Actinomycetota
GAG
Leu
>WENV170551672
CXWJ01017105
293204
Actinomycetota
GGC
Ala
>WENV170551237
CXWJ01001851
195667
Actinomycetota
GAT
Ile
>WENV170552198
CXWJ01045040
184518
Actinomycetota
CAT
Met
>WENV170551576
CXWJ01013259
430854
Actinomycetota
CTG
Gln
>WENV170552171
CXWJ01042489
181070
Actinomycetota
CAT
Met
>WENV170551951
CXWJ01031417
298209
Actinomycetota
CGT
Thr
>WENV170551912
CXWJ01029480
349114
Actinomycetota
GTT
Asn
>WENV170551302
CXWJ01003574
281498
Actinomycetota
ACG
Arg
>WENV170551885
CXWJ01027911
286398
Actinomycetota
GTT
Asn
>WENV170551658
CXWJ01016337
444550
Actinomycetota
GAC
Val
>WENV170552248
CXWJ01049326
290588
Actinomycetota
CTT
Lys
>WENV170551821
CXWJ01024449
366609
Actinomycetota
TTT
Lys
>WENV170552435
CXWJ01067443
57288
Actinomycetota
TGA
Ser
>WENV170552047
CXWJ01035993
57288
Actinomycetota
TGA
Ser
>WENV170552304
CXWJ01053961
308433
Actinomycetota
CCA
Trp
>WENV170551690
CXWJ01017735
74688
Actinomycetota
CAG
Leu
>WENV170552378
CXWJ01059549
281633
Actinomycetota
CCA
Trp
>WENV170552181
CXWJ01043350
150409
Actinomycetota
TTG
Gln
>WENV170552211
CXWJ01046732
150409
Actinomycetota
TTG
Gln
>WENV170552341
CXWJ01056975
150409
Actinomycetota
TTG
Gln
>WENV170552006
CXWJ01033943
20383
Actinomycetota
CGA
Ser
>WENV170552323
CXWJ01055503
20383
Actinomycetota
CGA
Ser
>WENV170552023
CXWJ01035107
209317
Actinomycetota
CAC
Val
>WENV170552185
CXWJ01043810
58234
Actinomycetota
GGA
Ser
>WENV170552130
CXWJ01040966
399483
Actinomycetota
CTG
Gln
>WENV170552289
CXWJ01053091
298645
Actinomycetota
GTG
His
>WENV170552410
CXWJ01063432
46891
Actinomycetota
GAG
Leu
>WENV170551548
CXWJ01011934
57859
Actinomycetota
GGA
Ser
>WENV170552078
CXWJ01037420
178519
Actinomycetota
GGG
Pro
>WENV170552199
CXWJ01045418
236563
Actinomycetota
CGG
Pro
>WENV170552327
CXWJ01055684
313796
Actinomycetota
ACG
Arg
>WENV170552022
CXWJ01035030
317597
Actinomycetota
CTT
Lys
>WENV170552099
CXWJ01038660
481421
Actinomycetota
TCC
Gly
>WENV170552357
CXWJ01058123
219754
Actinomycetota
CAT
Met
>WENV170552123
CXWJ01040323
284259
Actinomycetota
CGC
Ala
>WENV170551971
CXWJ01032981
48117
Actinomycetota
GAG
Leu
>WENV170552258
CXWJ01050601
469191
Actinomycetota
CTG
Gln
>WENV170551590
CXWJ01013875
178317
Actinomycetota
CAT
Met
>WENV170551960
CXWJ01032517
178317
Actinomycetota
CAT
Met
>WENV170552408
CXWJ01062995
301037
Actinomycetota
CGC
Ala
>WENV170552014
CXWJ01034335
285809
Actinomycetota
ACG
Arg
>WENV170551484
CXWJ01009112
504131
Actinomycetota
GCA
Cys
>WENV170552294
CXWJ01053591
283059
Actinomycetota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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