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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170761867
LUMW01000025
46779
Actinomycetota
GAG
Leu
>WENV170762794
LUMW01040539
282830
Actinomycetota
CGC
Ala
>WENV170762177
LUMW01001757
181070
Actinomycetota
CAT
Met
>WENV170762712
LUMW01030277
282829
Actinomycetota
GCC
Gly
>WENV170762639
LUMW01020384
289180
Actinomycetota
CCG
Arg
>WENV170761843
LUMW01000001
284834
Actinomycetota
GGC
Ala
>WENV170761942
LUMW01000154
74688
Actinomycetota
CAG
Leu
>WENV170762019
LUMW01000472
281633
Actinomycetota
CCA
Trp
>WENV170762634
LUMW01020242
281633
Actinomycetota
CCA
Trp
>WENV170761892
LUMW01000069
150409
Actinomycetota
TTG
Gln
>WENV170762642
LUMW01020856
281097
Actinomycetota
TTT
Lys
>WENV170762096
LUMW01000906
286077
Actinomycetota
CGT
Thr
>WENV170761936
LUMW01000137
313796
Actinomycetota
ACG
Arg
>WENV170761864
LUMW01000021
317597
Actinomycetota
CTT
Lys
>WENV170762100
LUMW01000928
150289
Actinomycetota
TTG
Gln
>WENV170762023
LUMW01000493
56738
Actinomycetota
GGA
Ser
>WENV170761977
LUMW01000274
330617
Actinomycetota
TTC
Glu
>WENV170762008
LUMW01000403
195620
Actinomycetota
TGG
Pro
>WENV170762027
LUMW01000506
316335
Actinomycetota
GGT
Thr
>WENV170762765
LUMW01036417
480923
Actinomycetota
GCA
Cys
>WENV170762002
LUMW01000378
423412
Actinomycetota
GAC
Val
>WENV170761944
LUMW01000155
178317
Actinomycetota
CAT
Met
>WENV170762771
LUMW01036717
307253
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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