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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182628940
OJKR01000075
283336
Actinomycetota
GGT
Thr
>WENV182629220
OJKR01037437
284906
Actinomycetota
CTC
Glu
>WENV182629084
OJKR01003525
423546
Actinomycetota
CTG
Gln
>WENV182628952
OJKR01000100
297693
Actinomycetota
TAC
Val
>WENV182629003
OJKR01000995
335449
Actinomycetota
TTT
Lys
>WENV182629087
OJKR01003730
280978
Actinomycetota
CGT
Thr
>WENV182628948
OJKR01000096
178802
Actinomycetota
TAA
Leu
>WENV182628939
OJKR01000075
118279
Actinomycetota
GTA
Tyr
>WENV182629022
OJKR01001310
218314
Actinomycetota
TCT
Arg
>WENV182629142
OJKR01010099
180097
Actinomycetota
CAA
Leu
>WENV182629100
OJKR01004612
46667
Actinomycetota
GGA
Ser
>WENV182628968
OJKR01000161
484727
Actinomycetota
CCC
Gly
>WENV182628995
OJKR01000839
484727
Actinomycetota
CCC
Gly
>WENV182628887
OJKR01000001
178581
Actinomycetota
TAC
Val
>WENV182629121
OJKR01006659
284907
Actinomycetota
TAC
Val
>WENV182629138
OJKR01009055
134439
Actinomycetota
GTA
Tyr
>WENV182628962
OJKR01000125
283405
Actinomycetota
CGT
Thr
>WENV182629208
OJKR01029757
400421
Actinomycetota
GAC
Val
>WENV182629238
OJKR01050864
284287
Actinomycetota
GAA
Phe
>WENV182629083
OJKR01003525
284896
Actinomycetota
CTC
Glu
>WENV182628898
OJKR01000006
100162
Actinomycetota
TGA
Ser
>WENV182629098
OJKR01004511
281035
Actinomycetota
GTT
Asn
>WENV182628922
OJKR01000035
317773
Actinomycetota
CTT
Lys
>WENV182629004
OJKR01000995
284900
Actinomycetota
TTC
Glu
>WENV182628936
OJKR01000069
280977
Actinomycetota
CCT
Arg
>WENV182629082
OJKR01003525
399100
Actinomycetota
CTG
Gln
>WENV182629014
OJKR01001150
401191
Actinomycetota
CAC
Val
>WENV182629050
OJKR01002193
118516
Actinomycetota
GTA
Tyr
>WENV182628883
OJKR01000001
283331
Actinomycetota
CTC
Glu
>WENV182628992
OJKR01000752
283331
Actinomycetota
CTC
Glu
>WENV182629094
OJKR01004173
280740
Actinomycetota
GTG
His
>WENV182628941
OJKR01000075
399203
Actinomycetota
CAT
Met
>WENV182629095
OJKR01004257
336201
Actinomycetota
TGT
Thr
>WENV182628958
OJKR01000111
20352
Actinomycetota
CGA
Ser
>WENV182628964
OJKR01000133
284897
Actinomycetota
GCC
Gly
>WENV182629128
OJKR01007648
209533
Actinomycetota
TAA
Leu
>WENV182628983
OJKR01000516
180096
Actinomycetota
GAT
Ile
>WENV182629029
OJKR01001497
284895
Actinomycetota
TCT
Arg
>WENV182629099
OJKR01004602
316925
Actinomycetota
CGC
Ala
>WENV182628913
OJKR01000017
178580
Actinomycetota
GAA
Phe
>WENV182628920
OJKR01000033
342697
Actinomycetota
TGC
Ala
>WENV182629069
OJKR01002899
176352
Actinomycetota
GGG
Pro
>WENV182628882
OJKR01000001
436761
Actinomycetota
CTG
Gln
>WENV182628953
OJKR01000105
403867
Actinomycetota
CTG
Gln
>WENV182629231
OJKR01047391
180083
Actinomycetota
CCG
Arg
>WENV182629109
OJKR01005174
13422
Actinomycetota
GCT
Ser
>WENV182629074
OJKR01003261
280982
Actinomycetota
CTT
Lys
>WENV182628972
OJKR01000229
46891
Actinomycetota
GAG
Leu
>WENV182628935
OJKR01000063
281248
Actinomycetota
GAA
Phe
>WENV182629196
OJKR01028271
184515
Actinomycetota
CAT
Met
>WENV182629168
OJKR01014287
219479
Actinomycetota
CAT
Met
>WENV182628984
OJKR01000516
312253
Actinomycetota
TGC
Ala
>WENV182628985
OJKR01000516
312253
Actinomycetota
TGC
Ala
>WENV182628923
OJKR01000035
459167
Actinomycetota
TCC
Gly
>WENV182628891
OJKR01000002
46790
Actinomycetota
GAG
Leu
>WENV182628918
OJKR01000027
499385
Actinomycetota
CCC
Gly
>WENV182629114
OJKR01005812
399099
Actinomycetota
>WENV182628912
OJKR01000017
178579
Actinomycetota
GTC
Asp
>WENV182628892
OJKR01000002
283329
Actinomycetota
GTG
His
>WENV182629124
OJKR01006957
180080
Actinomycetota
GGG
Pro
>WENV182628973
OJKR01000254
339485
Actinomycetota
GGC
Ala
>WENV182629104
OJKR01004764
339485
Actinomycetota
GGC
Ala
>WENV182628926
OJKR01000035
296882
Actinomycetota
GTG
His
>WENV182629126
OJKR01007160
46893
Actinomycetota
GAG
Leu
>WENV182628931
OJKR01000059
280983
Actinomycetota
TGT
Thr
>WENV182628980
OJKR01000491
180075
Actinomycetota
GAT
Ile
>WENV182629045
OJKR01001898
283335
Actinomycetota
CTT
Lys
>WENV182629105
OJKR01004794
399188
Actinomycetota
CAT
Met
>WENV182629031
OJKR01001573
406233
Actinomycetota
CAC
Val
>WENV182629125
OJKR01006958
337841
Actinomycetota
CTC
Glu
>WENV182629001
OJKR01000913
481452
Actinomycetota
CCC
Gly
>WENV182629091
OJKR01004006
281038
Actinomycetota
CGC
Ala
>WENV182628979
OJKR01000437
214183
Actinomycetota
CGG
Pro
>WENV182628919
OJKR01000030
100161
Actinomycetota
CAG
Leu
>WENV182628900
OJKR01000006
300986
Actinomycetota
ACG
Arg
>WENV182629214
OJKR01031822
103045
Actinomycetota
GTA
Tyr
>WENV182629053
OJKR01002726
241114
Actinomycetota
CGG
Pro
>WENV182628901
OJKR01000006
56387
Actinomycetota
CGA
Ser
>WENV182629123
OJKR01006679
56387
Actinomycetota
CGA
Ser
>WENV182629035
OJKR01001594
24826
Actinomycetota
CGA
Ser
>WENV182629089
OJKR01003809
120845
Actinomycetota
TAG
Leu
>WENV182629043
OJKR01001821
197533
Actinomycetota
CAT
Met
>WENV182628944
OJKR01000090
280979
Actinomycetota
GGT
Thr
>WENV182628989
OJKR01000654
307245
Actinomycetota
CGT
Thr
>WENV182629207
OJKR01029757
504131
Actinomycetota
GCA
Cys
>WENV182629075
OJKR01003287
176317
Actinomycetota
GAT
Ile
>WENV182629129
OJKR01007709
47775
Actinomycetota
GGA
Ser
>WENV182628914
OJKR01000017
178582
Actinomycetota
TTT
Lys
>WENV182629113
OJKR01005808
211424
Actinomycetota
CAA
Leu
>WENV182629047
OJKR01002089
306243
Actinomycetota
CGT
Thr
>WENV182628955
OJKR01000109
73874
Actinomycetota
CAG
Leu
>WENV182628903
OJKR01000008
283322
Actinomycetota
CGT
Thr
>WENV182628946
OJKR01000090
284899
Actinomycetota
CCA
Trp
>WENV182629097
OJKR01004424
197906
Actinomycetota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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