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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183728463
PJTQ01000063
340609
Actinomycetota
GCC
Gly
>WENV183729291
PJTQ01018612
349357
Actinomycetota
GGT
Thr
>WENV183728466
PJTQ01000063
347986
Actinomycetota
CAC
Val
>WENV183728480
PJTQ01000072
243493
Actinomycetota
CCT
Arg
>WENV183728516
PJTQ01000101
105043
Actinomycetota
TAG
Leu
>WENV183729546
PJTQ01064524
338763
Actinomycetota
GCC
Gly
>WENV183728359
PJTQ01000028
251199
Actinomycetota
TTT
Lys
>WENV183729600
PJTQ01085906
237508
Actinomycetota
TTT
Lys
>WENV183729340
PJTQ01024453
412084
Actinomycetota
CCC
Gly
>WENV183728491
PJTQ01000083
412084
Actinomycetota
CCC
Gly
>WENV183728523
PJTQ01000108
162442
Actinomycetota
GAT
Ile
>WENV183728440
PJTQ01000055
148837
Actinomycetota
CAT
Met
>WENV183729460
PJTQ01042350
277748
Actinomycetota
TCT
Arg
>WENV183728237
PJTQ01000004
95931
Actinomycetota
GTA
Tyr
>WENV183728315
PJTQ01000014
16376
Actinomycetota
CGA
Ser
>WENV183728510
PJTQ01000097
374962
Actinomycetota
CCT
Arg
>WENV183728371
PJTQ01000030
254605
Actinomycetota
TAA
Leu
>WENV183728236
PJTQ01000004
237513
Actinomycetota
ACG
Arg
>WENV183729472
PJTQ01045511
248046
Actinomycetota
CCA
Trp
>WENV183728235
PJTQ01000004
12308
Actinomycetota
GCT
Ser
>WENV183728509
PJTQ01000097
237588
Actinomycetota
TGT
Thr
>WENV183728950
PJTQ01001396
149979
Actinomycetota
TGT
Thr
>WENV183729425
PJTQ01038241
277759
Actinomycetota
GCC
Gly
>WENV183728238
PJTQ01000004
342999
Actinomycetota
GGT
Thr
>WENV183728271
PJTQ01000008
412879
Actinomycetota
TCC
Gly
>WENV183728229
PJTQ01000003
269853
Actinomycetota
CTC
Glu
>WENV183728228
PJTQ01000003
338297
Actinomycetota
CTG
Gln
>WENV183728403
PJTQ01000042
179547
Actinomycetota
GGG
Pro
>WENV183728468
PJTQ01000063
193267
Actinomycetota
CAA
Leu
>WENV183729055
PJTQ01003478
268346
Actinomycetota
GGC
Ala
>WENV183728583
PJTQ01000153
268346
Actinomycetota
GGC
Ala
>WENV183728395
PJTQ01000040
82645
Actinomycetota
GAG
Leu
>WENV183728439
PJTQ01000055
237499
Actinomycetota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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