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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
135 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183716328
PDWI01301767
339149
Alphaproteobacteria
GTT
Asn
>WENV183704739
PDWI01000568
365250
Alphaproteobacteria
GCC
Gly
>WENV183706533
PDWI01004596
365250
Alphaproteobacteria
GCC
Gly
>WENV183707387
PDWI01008198
148200
Alphaproteobacteria
TGG
Pro
>WENV183710636
PDWI01050545
148200
Alphaproteobacteria
TGG
Pro
>WENV183713501
PDWI01141112
148200
Alphaproteobacteria
TGG
Pro
>WENV183705200
PDWI01001213
237739
Alphaproteobacteria
CGT
Thr
>WENV183714657
PDWI01196385
237739
Alphaproteobacteria
CGT
Thr
>WENV183706228
PDWI01003526
144891
Alphaproteobacteria
CAT
Met
>WENV183710848
PDWI01054591
267922
Alphaproteobacteria
CCA
Trp
>WENV183711042
PDWI01059781
267922
Alphaproteobacteria
CCA
Trp
>WENV183715258
PDWI01229938
343545
Alphaproteobacteria
CAC
Val
>WENV183712283
PDWI01094621
343545
Alphaproteobacteria
CAC
Val
>WENV183710879
PDWI01055349
343545
Alphaproteobacteria
CAC
Val
>WENV183709627
PDWI01031189
343545
Alphaproteobacteria
CAC
Val
>WENV183704328
PDWI01000155
241021
Alphaproteobacteria
GGC
Ala
>WENV183712156
PDWI01090915
113700
Alphaproteobacteria
>WENV183704740
PDWI01000568
113700
Alphaproteobacteria
>WENV183716294
PDWI01299692
23468
Alphaproteobacteria
GCT
Ser
>WENV183708911
PDWI01021348
23468
Alphaproteobacteria
GCT
Ser
>WENV183708809
PDWI01020105
23468
Alphaproteobacteria
GCT
Ser
>WENV183708481
PDWI01016612
23468
Alphaproteobacteria
GCT
Ser
>WENV183707704
PDWI01010034
23468
Alphaproteobacteria
GCT
Ser
>WENV183706074
PDWI01003042
23468
Alphaproteobacteria
GCT
Ser
>WENV183704804
PDWI01000650
23468
Alphaproteobacteria
GCT
Ser
>WENV183711813
PDWI01081197
256175
Alphaproteobacteria
TGT
Thr
>WENV183710476
PDWI01047382
256175
Alphaproteobacteria
TGT
Thr
>WENV183708099
PDWI01012898
256175
Alphaproteobacteria
TGT
Thr
>WENV183715830
PDWI01265841
81091
Alphaproteobacteria
GTA
Tyr
>WENV183710262
PDWI01042942
282595
Alphaproteobacteria
CCA
Trp
>WENV183710123
PDWI01039882
282595
Alphaproteobacteria
CCA
Trp
>WENV183707124
PDWI01006848
282595
Alphaproteobacteria
CCA
Trp
>WENV183714665
PDWI01196951
239119
Alphaproteobacteria
CGT
Thr
>WENV183708000
PDWI01012185
239119
Alphaproteobacteria
CGT
Thr
>WENV183704135
PDWI01000047
239119
Alphaproteobacteria
CGT
Thr
>WENV183713629
PDWI01146017
338282
Alphaproteobacteria
GTT
Asn
>WENV183712961
PDWI01120113
338282
Alphaproteobacteria
GTT
Asn
>WENV183709101
PDWI01023822
338282
Alphaproteobacteria
GTT
Asn
>WENV183707156
PDWI01007053
338282
Alphaproteobacteria
GTT
Asn
>WENV183707016
PDWI01006368
338282
Alphaproteobacteria
GTT
Asn
>WENV183705259
PDWI01001282
338282
Alphaproteobacteria
GTT
Asn
>WENV183704145
PDWI01000052
338282
Alphaproteobacteria
GTT
Asn
>WENV183708767
PDWI01019607
147083
Alphaproteobacteria
GGG
Pro
>WENV183704547
PDWI01000351
147083
Alphaproteobacteria
GGG
Pro
>WENV183704240
PDWI01000110
340220
Alphaproteobacteria
TTC
Glu
>WENV183711776
PDWI01080038
340288
Alphaproteobacteria
GCC
Gly
>WENV183709473
PDWI01028709
340288
Alphaproteobacteria
GCC
Gly
>WENV183714614
PDWI01194553
339457
Alphaproteobacteria
>WENV183706584
PDWI01004758
25760
Alphaproteobacteria
CGA
Ser
>WENV183715439
PDWI01241086
237740
Alphaproteobacteria
TTT
Lys
>WENV183714048
PDWI01165232
237740
Alphaproteobacteria
TTT
Lys
>WENV183709684
PDWI01032065
237740
Alphaproteobacteria
TTT
Lys
>WENV183705808
PDWI01002320
237740
Alphaproteobacteria
TTT
Lys
>WENV183712759
PDWI01112951
146854
Alphaproteobacteria
CCT
Arg
>WENV183704883
PDWI01000731
147334
Alphaproteobacteria
CAT
Met
>WENV183704144
PDWI01000052
147334
Alphaproteobacteria
CAT
Met
>WENV183704462
PDWI01000272
147876
Alphaproteobacteria
TCT
Arg
>WENV183714073
PDWI01166631
281594
Alphaproteobacteria
TGT
Thr
>WENV183707059
PDWI01006547
281594
Alphaproteobacteria
TGT
Thr
>WENV183705793
PDWI01002278
281594
Alphaproteobacteria
TGT
Thr
>WENV183705596
PDWI01001898
281594
Alphaproteobacteria
TGT
Thr
>WENV183704136
PDWI01000047
281594
Alphaproteobacteria
TGT
Thr
>WENV183704445
PDWI01000244
338757
Alphaproteobacteria
GAC
Val
>WENV183711184
PDWI01062739
413626
Alphaproteobacteria
TCC
Gly
>WENV183708833
PDWI01020299
413626
Alphaproteobacteria
TCC
Gly
>WENV183707667
PDWI01009833
413626
Alphaproteobacteria
TCC
Gly
>WENV183715506
PDWI01244267
28682
Alphaproteobacteria
GGA
Ser
>WENV183713298
PDWI01133223
28682
Alphaproteobacteria
GGA
Ser
>WENV183709859
PDWI01035516
28682
Alphaproteobacteria
GGA
Ser
>WENV183711031
PDWI01059483
161002
Alphaproteobacteria
GTG
His
>WENV183707481
PDWI01008652
161002
Alphaproteobacteria
GTG
His
>WENV183705108
PDWI01001045
161002
Alphaproteobacteria
GTG
His
>WENV183715267
PDWI01230390
148083
Alphaproteobacteria
ACG
Arg
>WENV183713497
PDWI01141036
148083
Alphaproteobacteria
ACG
Arg
>WENV183711053
PDWI01060162
148083
Alphaproteobacteria
ACG
Arg
>WENV183716172
PDWI01291808
289655
Alphaproteobacteria
GGC
Ala
>WENV183715721
PDWI01258751
289655
Alphaproteobacteria
GGC
Ala
>WENV183711451
PDWI01069970
289655
Alphaproteobacteria
GGC
Ala
>WENV183707768
PDWI01010517
289655
Alphaproteobacteria
GGC
Ala
>WENV183708738
PDWI01019244
59164
Alphaproteobacteria
GAG
Leu
>WENV183705792
PDWI01002271
59164
Alphaproteobacteria
GAG
Leu
>WENV183712581
PDWI01105594
23648
Alphaproteobacteria
CGA
Ser
>WENV183706229
PDWI01003526
23648
Alphaproteobacteria
CGA
Ser
>WENV183715301
PDWI01231752
254387
Alphaproteobacteria
TTT
Lys
>WENV183714934
PDWI01211826
254387
Alphaproteobacteria
TTT
Lys
>WENV183713931
PDWI01159721
254387
Alphaproteobacteria
TTT
Lys
>WENV183710833
PDWI01054203
254387
Alphaproteobacteria
TTT
Lys
>WENV183707549
PDWI01008972
254387
Alphaproteobacteria
TTT
Lys
>WENV183705255
PDWI01001273
254387
Alphaproteobacteria
TTT
Lys
>WENV183709151
PDWI01024629
348781
Alphaproteobacteria
GAA
Phe
>WENV183712481
PDWI01101489
163860
Alphaproteobacteria
GGG
Pro
>WENV183711683
PDWI01076586
163860
Alphaproteobacteria
GGG
Pro
>WENV183710135
PDWI01040141
163860
Alphaproteobacteria
GGG
Pro
>WENV183704447
PDWI01000246
163860
Alphaproteobacteria
GGG
Pro
>WENV183713977
PDWI01162063
338760
Alphaproteobacteria
GAA
Phe
>WENV183713294
PDWI01132950
338760
Alphaproteobacteria
GAA
Phe
>WENV183712957
PDWI01120013
338760
Alphaproteobacteria
GAA
Phe
>WENV183708101
PDWI01012946
338760
Alphaproteobacteria
GAA
Phe
>WENV183705352
PDWI01001424
338760
Alphaproteobacteria
GAA
Phe
>WENV183705276
PDWI01001317
338760
Alphaproteobacteria
GAA
Phe
>WENV183704887
PDWI01000731
82948
Alphaproteobacteria
CAA
Leu
>WENV183708959
PDWI01021858
237196
Alphaproteobacteria
CGT
Thr
>WENV183708175
PDWI01013559
237196
Alphaproteobacteria
CGT
Thr
>WENV183714009
PDWI01163615
339465
Alphaproteobacteria
GGT
Thr
>WENV183704242
PDWI01000110
147087
Alphaproteobacteria
GTG
His
>WENV183712725
PDWI01111612
339464
Alphaproteobacteria
GCC
Gly
>WENV183714711
PDWI01199350
339606
Alphaproteobacteria
>WENV183712627
PDWI01107603
339606
Alphaproteobacteria
>WENV183709644
PDWI01031481
339606
Alphaproteobacteria
>WENV183705109
PDWI01001045
339606
Alphaproteobacteria
>WENV183704241
PDWI01000110
339609
Alphaproteobacteria
GGT
Thr
>WENV183716323
PDWI01301100
412424
Alphaproteobacteria
TCC
Gly
>WENV183706027
PDWI01002939
412424
Alphaproteobacteria
TCC
Gly
>WENV183704910
PDWI01000759
412424
Alphaproteobacteria
TCC
Gly
>WENV183712388
PDWI01098285
259072
Alphaproteobacteria
CGC
Ala
>WENV183715895
PDWI01271648
154579
Alphaproteobacteria
GTG
His
>WENV183715066
PDWI01219918
154579
Alphaproteobacteria
GTG
His
>WENV183705199
PDWI01001213
127020
Alphaproteobacteria
TCT
Arg
>WENV183715259
PDWI01229938
236256
Alphaproteobacteria
TAC
Val
>WENV183713198
PDWI01128790
236256
Alphaproteobacteria
TAC
Val
>WENV183706386
PDWI01004030
236256
Alphaproteobacteria
TAC
Val
>WENV183707082
PDWI01006601
193837
Alphaproteobacteria
CAT
Met
>WENV183716292
PDWI01299528
147088
Alphaproteobacteria
CCT
Arg
>WENV183715115
PDWI01221825
147088
Alphaproteobacteria
CCT
Arg
>WENV183712914
PDWI01118731
147088
Alphaproteobacteria
CCT
Arg
>WENV183712904
PDWI01118248
147088
Alphaproteobacteria
CCT
Arg
>WENV183712342
PDWI01096723
147088
Alphaproteobacteria
CCT
Arg
>WENV183710996
PDWI01058256
147088
Alphaproteobacteria
CCT
Arg
>WENV183708740
PDWI01019288
147088
Alphaproteobacteria
CCT
Arg
>WENV183704731
PDWI01000557
147088
Alphaproteobacteria
CCT
Arg
>WENV183714551
PDWI01190276
113767
Alphaproteobacteria
>WENV183710804
PDWI01053772
113767
Alphaproteobacteria
>WENV183706534
PDWI01004596
113767
Alphaproteobacteria
>WENV183713048
PDWI01122588
426627
Alphaproteobacteria
TCC
Gly
>WENV183708342
PDWI01014956
426627
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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