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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183745348
PJUL01032382
340193
Bacteroidota
TTC
Glu
>WENV183745171
PJUL01004074
145315
Bacteroidota
CAT
Met
>WENV183745216
PJUL01006634
147864
Bacteroidota
TGG
Pro
>WENV183745303
PJUL01020561
51937
Bacteroidota
TAA
Leu
>WENV183744553
PJUL01000010
256428
Bacteroidota
GAA
Phe
>WENV183745135
PJUL01002931
126978
Bacteroidota
GAT
Ile
>WENV183745301
PJUL01020561
235817
Bacteroidota
GAA
Phe
>WENV183745158
PJUL01003497
340303
Bacteroidota
CCT
Arg
>WENV183745194
PJUL01005178
148416
Bacteroidota
GTT
Asn
>WENV183745286
PJUL01015668
267805
Bacteroidota
TCC
Gly
>WENV183745305
PJUL01020907
237429
Bacteroidota
TTT
Lys
>WENV183745090
PJUL01002185
151405
Bacteroidota
TGC
Ala
>WENV183744770
PJUL01000204
285949
Bacteroidota
GCC
Gly
>WENV183745366
PJUL01038126
127215
Bacteroidota
TAC
Val
>WENV183745364
PJUL01038126
127215
Bacteroidota
TAC
Val
>WENV183745285
PJUL01015668
81622
Bacteroidota
GTA
Tyr
>WENV183745369
PJUL01038216
238600
Bacteroidota
CAT
Met
>WENV183745349
PJUL01032382
238600
Bacteroidota
CAT
Met
>WENV183745287
PJUL01015668
342824
Bacteroidota
GGT
Thr
>WENV183745365
PJUL01038126
126680
Bacteroidota
TAC
Val
>WENV183744808
PJUL01000275
166688
Bacteroidota
GTC
Asp
>WENV183744807
PJUL01000275
166688
Bacteroidota
GTC
Asp
>WENV183745322
PJUL01024475
412518
Bacteroidota
GCA
Cys
>WENV183744723
PJUL01000110
350659
Bacteroidota
TTC
Glu
>WENV183745352
PJUL01034250
23420
Bacteroidota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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