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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
200 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV000068
AB260935
123265
Gammaproteobacteria
GAG
Leu
>ENV001458
AY933346
285837
Gammaproteobacteria
TAC
Val
>ENV002448
AY934107
297858
Gammaproteobacteria
TGC
Ala
>ENV002449
AY934108
297858
Gammaproteobacteria
TGC
Ala
>ENV003232
DQ009154
297858
Gammaproteobacteria
TGC
Ala
>ENV003233
DQ009155
297858
Gammaproteobacteria
TGC
Ala
>ENV003234
DQ009156
297858
Gammaproteobacteria
TGC
Ala
>ENV001090
AY484730
178164
Gammaproteobacteria
GAT
Ile
>ENV001284
AY590664
178164
Gammaproteobacteria
GAT
Ile
>ENV001286
AY590665
178164
Gammaproteobacteria
GAT
Ile
>ENV001288
AY590666
178164
Gammaproteobacteria
GAT
Ile
>ENV001290
AY590667
178164
Gammaproteobacteria
GAT
Ile
>ENV001292
AY590668
178164
Gammaproteobacteria
GAT
Ile
>ENV001294
AY590680
178164
Gammaproteobacteria
GAT
Ile
>ENV001296
AY590681
178164
Gammaproteobacteria
GAT
Ile
>ENV001298
AY590682
178164
Gammaproteobacteria
GAT
Ile
>ENV001300
AY590683
178164
Gammaproteobacteria
GAT
Ile
>ENV001302
AY590684
178164
Gammaproteobacteria
GAT
Ile
>ENV001304
AY590685
178164
Gammaproteobacteria
GAT
Ile
>ENV001305
AY627374
178164
Gammaproteobacteria
GAT
Ile
>ENV001449
AY932859
178164
Gammaproteobacteria
GAT
Ile
>ENV001450
AY932860
178164
Gammaproteobacteria
GAT
Ile
>ENV002506
AY934147
178164
Gammaproteobacteria
GAT
Ile
>ENV002508
AY934148
178164
Gammaproteobacteria
GAT
Ile
>ENV002510
AY934149
178164
Gammaproteobacteria
GAT
Ile
>ENV002519
AY934154
178164
Gammaproteobacteria
GAT
Ile
>ENV002586
AY934190
178164
Gammaproteobacteria
GAT
Ile
>ENV002608
AY934201
178164
Gammaproteobacteria
GAT
Ile
>ENV002610
AY934202
178164
Gammaproteobacteria
GAT
Ile
>ENV002612
AY934203
178164
Gammaproteobacteria
GAT
Ile
>ENV002614
AY934204
178164
Gammaproteobacteria
GAT
Ile
>ENV002616
AY934205
178164
Gammaproteobacteria
GAT
Ile
>ENV002618
AY934206
178164
Gammaproteobacteria
GAT
Ile
>ENV002620
AY934207
178164
Gammaproteobacteria
GAT
Ile
>ENV002622
AY934208
178164
Gammaproteobacteria
GAT
Ile
>ENV002624
AY934209
178164
Gammaproteobacteria
GAT
Ile
>ENV002626
AY934210
178164
Gammaproteobacteria
GAT
Ile
>ENV002628
AY934211
178164
Gammaproteobacteria
GAT
Ile
>ENV002631
AY934213
178164
Gammaproteobacteria
GAT
Ile
>ENV002633
AY934214
178164
Gammaproteobacteria
GAT
Ile
>ENV002635
AY934215
178164
Gammaproteobacteria
GAT
Ile
>ENV002637
AY934216
178164
Gammaproteobacteria
GAT
Ile
>ENV002639
AY934217
178164
Gammaproteobacteria
GAT
Ile
>ENV002641
AY934218
178164
Gammaproteobacteria
GAT
Ile
>ENV002643
AY934219
178164
Gammaproteobacteria
GAT
Ile
>ENV002645
AY934220
178164
Gammaproteobacteria
GAT
Ile
>ENV002647
AY934221
178164
Gammaproteobacteria
GAT
Ile
>ENV002649
AY934222
178164
Gammaproteobacteria
GAT
Ile
>ENV002651
AY934223
178164
Gammaproteobacteria
GAT
Ile
>ENV002653
AY934224
178164
Gammaproteobacteria
GAT
Ile
>ENV002655
AY934225
178164
Gammaproteobacteria
GAT
Ile
>ENV002657
AY934226
178164
Gammaproteobacteria
GAT
Ile
>ENV002659
AY934227
178164
Gammaproteobacteria
GAT
Ile
>ENV002661
AY934228
178164
Gammaproteobacteria
GAT
Ile
>ENV002663
AY934229
178164
Gammaproteobacteria
GAT
Ile
>ENV002665
AY934230
178164
Gammaproteobacteria
GAT
Ile
>ENV002667
AY934231
178164
Gammaproteobacteria
GAT
Ile
>ENV002669
AY934232
178164
Gammaproteobacteria
GAT
Ile
>ENV002671
AY934233
178164
Gammaproteobacteria
GAT
Ile
>ENV002673
AY934234
178164
Gammaproteobacteria
GAT
Ile
>ENV002675
AY934235
178164
Gammaproteobacteria
GAT
Ile
>ENV002677
AY934236
178164
Gammaproteobacteria
GAT
Ile
>ENV002679
AY934237
178164
Gammaproteobacteria
GAT
Ile
>ENV002681
AY934238
178164
Gammaproteobacteria
GAT
Ile
>ENV002683
AY934239
178164
Gammaproteobacteria
GAT
Ile
>ENV002697
AY934246
178164
Gammaproteobacteria
GAT
Ile
>ENV002699
AY934247
178164
Gammaproteobacteria
GAT
Ile
>ENV002707
AY934251
178164
Gammaproteobacteria
GAT
Ile
>ENV002710
AY934253
178164
Gammaproteobacteria
GAT
Ile
>ENV002712
AY934254
178164
Gammaproteobacteria
GAT
Ile
>ENV002714
AY934255
178164
Gammaproteobacteria
GAT
Ile
>ENV002716
AY934256
178164
Gammaproteobacteria
GAT
Ile
>ENV002720
AY934258
178164
Gammaproteobacteria
GAT
Ile
>ENV002727
AY934262
178164
Gammaproteobacteria
GAT
Ile
>ENV002731
AY934264
178164
Gammaproteobacteria
GAT
Ile
>ENV002741
AY934269
178164
Gammaproteobacteria
GAT
Ile
>ENV002745
AY934271
178164
Gammaproteobacteria
GAT
Ile
>ENV002749
AY934273
178164
Gammaproteobacteria
GAT
Ile
>ENV002765
AY934281
178164
Gammaproteobacteria
GAT
Ile
>ENV002766
AY934282
178164
Gammaproteobacteria
GAT
Ile
>ENV002768
AY934283
178164
Gammaproteobacteria
GAT
Ile
>ENV002769
AY934284
178164
Gammaproteobacteria
GAT
Ile
>ENV002771
AY934285
178164
Gammaproteobacteria
GAT
Ile
>ENV002773
AY934286
178164
Gammaproteobacteria
GAT
Ile
>ENV002780
AY934292
178164
Gammaproteobacteria
GAT
Ile
>ENV002800
AY934303
178164
Gammaproteobacteria
GAT
Ile
>ENV002802
AY934304
178164
Gammaproteobacteria
GAT
Ile
>ENV002836
AY934323
178164
Gammaproteobacteria
GAT
Ile
>ENV002860
AY934336
178164
Gammaproteobacteria
GAT
Ile
>ENV002909
AY934366
178164
Gammaproteobacteria
GAT
Ile
>ENV002915
AY934369
178164
Gammaproteobacteria
GAT
Ile
>ENV002917
AY934370
178164
Gammaproteobacteria
GAT
Ile
>ENV002931
AY934377
178164
Gammaproteobacteria
GAT
Ile
>ENV002937
AY934380
178164
Gammaproteobacteria
GAT
Ile
>ENV002939
AY934381
178164
Gammaproteobacteria
GAT
Ile
>ENV002951
AY934388
178164
Gammaproteobacteria
GAT
Ile
>ENV002985
AY934408
178164
Gammaproteobacteria
GAT
Ile
>ENV003215
DQ009131
178164
Gammaproteobacteria
GAT
Ile
>ENV003765
DQ009451
178164
Gammaproteobacteria
GAT
Ile
>ENV003797
DQ009470
178164
Gammaproteobacteria
GAT
Ile
>ENV002451
AY934110
357066
Gammaproteobacteria
TGC
Ala
>ENV002452
AY934111
357066
Gammaproteobacteria
TGC
Ala
>ENV002453
AY934112
357066
Gammaproteobacteria
TGC
Ala
>ENV002454
AY934113
357066
Gammaproteobacteria
TGC
Ala
>ENV002456
AY934115
357066
Gammaproteobacteria
TGC
Ala
>ENV002457
AY934116
357066
Gammaproteobacteria
TGC
Ala
>ENV002458
AY934117
357066
Gammaproteobacteria
TGC
Ala
>ENV002459
AY934118
357066
Gammaproteobacteria
TGC
Ala
>ENV002460
AY934119
357066
Gammaproteobacteria
TGC
Ala
>ENV002461
AY934120
357066
Gammaproteobacteria
TGC
Ala
>ENV002462
AY934121
357066
Gammaproteobacteria
TGC
Ala
>ENV002463
AY934123
357066
Gammaproteobacteria
TGC
Ala
>ENV002478
AY934132
357066
Gammaproteobacteria
TGC
Ala
>ENV002581
AY934187
357066
Gammaproteobacteria
TGC
Ala
>ENV002521
AY934155
190704
Gammaproteobacteria
GAT
Ile
>ENV000399
AF422526
282515
Gammaproteobacteria
TGC
Ala
>ENV002493
AY934139
281436
Gammaproteobacteria
TGC
Ala
>ENV002522
AY934155
281436
Gammaproteobacteria
TGC
Ala
>ENV003007
AY934419
204522
Gammaproteobacteria
GAT
Ile
>ENV003017
AY934425
204522
Gammaproteobacteria
GAT
Ile
>ENV001447
AY932826
204522
Gammaproteobacteria
GAT
Ile
>ENV002962
AY934394
204522
Gammaproteobacteria
GAT
Ile
>ENV002969
AY934399
204522
Gammaproteobacteria
GAT
Ile
>ENV002977
AY934403
204522
Gammaproteobacteria
GAT
Ile
>ENV002997
AY934414
204522
Gammaproteobacteria
GAT
Ile
>ENV002999
AY934415
204522
Gammaproteobacteria
GAT
Ile
>ENV003001
AY934416
204522
Gammaproteobacteria
GAT
Ile
>ENV002839
AY934325
183701
Gammaproteobacteria
GAT
Ile
>ENV002919
AY934371
237764
Gammaproteobacteria
GAT
Ile
>ENV000953
AY212800
29663
Gammaproteobacteria
TGA
Ser
>ENV000722
AJ879933
281418
Gammaproteobacteria
TGC
Ala
>ENV000955
AY235676
281418
Gammaproteobacteria
TGC
Ala
>ENV000957
AY235677
281418
Gammaproteobacteria
TGC
Ala
>ENV000959
AY235678
281418
Gammaproteobacteria
TGC
Ala
>ENV000961
AY235679
281418
Gammaproteobacteria
TGC
Ala
>ENV000963
AY235680
281418
Gammaproteobacteria
TGC
Ala
>ENV002492
AY934138
281418
Gammaproteobacteria
TGC
Ala
>ENV002837
AY934323
281418
Gammaproteobacteria
TGC
Ala
>ENV003795
DQ009467
281418
Gammaproteobacteria
TGC
Ala
>ENV000889
AY033301
176301
Gammaproteobacteria
GAT
Ile
>ENV000954
AY235676
176301
Gammaproteobacteria
GAT
Ile
>ENV000956
AY235677
176301
Gammaproteobacteria
GAT
Ile
>ENV000958
AY235678
176301
Gammaproteobacteria
GAT
Ile
>ENV000960
AY235679
176301
Gammaproteobacteria
GAT
Ile
>ENV000962
AY235680
176301
Gammaproteobacteria
GAT
Ile
>ENV001041
AY458646
176301
Gammaproteobacteria
GAT
Ile
>ENV002494
AY934140
176301
Gammaproteobacteria
GAT
Ile
>ENV002499
AY934143
176301
Gammaproteobacteria
GAT
Ile
>ENV002503
AY934145
176301
Gammaproteobacteria
GAT
Ile
>ENV002516
AY934152
176301
Gammaproteobacteria
GAT
Ile
>ENV002523
AY934156
176301
Gammaproteobacteria
GAT
Ile
>ENV002526
AY934158
176301
Gammaproteobacteria
GAT
Ile
>ENV002528
AY934159
176301
Gammaproteobacteria
GAT
Ile
>ENV002530
AY934160
176301
Gammaproteobacteria
GAT
Ile
>ENV002532
AY934161
176301
Gammaproteobacteria
GAT
Ile
>ENV002542
AY934166
176301
Gammaproteobacteria
GAT
Ile
>ENV002544
AY934167
176301
Gammaproteobacteria
GAT
Ile
>ENV002548
AY934170
176301
Gammaproteobacteria
GAT
Ile
>ENV002552
AY934172
176301
Gammaproteobacteria
GAT
Ile
>ENV002555
AY934174
176301
Gammaproteobacteria
GAT
Ile
>ENV002561
AY934177
176301
Gammaproteobacteria
GAT
Ile
>ENV002565
AY934179
176301
Gammaproteobacteria
GAT
Ile
>ENV002567
AY934180
176301
Gammaproteobacteria
GAT
Ile
>ENV002865
AY934339
176301
Gammaproteobacteria
GAT
Ile
>ENV002879
AY934347
176301
Gammaproteobacteria
GAT
Ile
>ENV002889
AY934352
176301
Gammaproteobacteria
GAT
Ile
>ENV002911
AY934367
176301
Gammaproteobacteria
GAT
Ile
>ENV002913
AY934368
176301
Gammaproteobacteria
GAT
Ile
>ENV002929
AY934376
176301
Gammaproteobacteria
GAT
Ile
>ENV002967
AY934398
176301
Gammaproteobacteria
GAT
Ile
>ENV002980
AY934405
176301
Gammaproteobacteria
GAT
Ile
>ENV002987
AY934409
176301
Gammaproteobacteria
GAT
Ile
>ENV003003
AY934417
176301
Gammaproteobacteria
GAT
Ile
>ENV003009
AY934420
176301
Gammaproteobacteria
GAT
Ile
>ENV003014
AY934423
176301
Gammaproteobacteria
GAT
Ile
>ENV003205
DQ009126
176301
Gammaproteobacteria
GAT
Ile
>ENV003207
DQ009127
176301
Gammaproteobacteria
GAT
Ile
>ENV003209
DQ009128
176301
Gammaproteobacteria
GAT
Ile
>ENV003211
DQ009129
176301
Gammaproteobacteria
GAT
Ile
>ENV003213
DQ009130
176301
Gammaproteobacteria
GAT
Ile
>ENV003224
DQ009136
176301
Gammaproteobacteria
GAT
Ile
>ENV003230
DQ009140
176301
Gammaproteobacteria
GAT
Ile
>ENV003643
DQ009372
176301
Gammaproteobacteria
GAT
Ile
>ENV003645
DQ009373
176301
Gammaproteobacteria
GAT
Ile
>ENV003717
DQ009424
176301
Gammaproteobacteria
GAT
Ile
>ENV003791
DQ009465
176301
Gammaproteobacteria
GAT
Ile
>ENV003794
DQ009467
176301
Gammaproteobacteria
GAT
Ile
>ENV002968
AY934398
317792
Gammaproteobacteria
TGC
Ala
>ENV004283
DQ834350
301005
Gammaproteobacteria
TGC
Ala
>ENV004286
DQ834353
301005
Gammaproteobacteria
TGC
Ala
>ENV002894
AY934355
205795
Gammaproteobacteria
GAT
Ile
>ENV002964
AY934396
205795
Gammaproteobacteria
GAT
Ile
>ENV002979
AY934404
205795
Gammaproteobacteria
GAT
Ile
>ENV002945
AY934384
178468
Gammaproteobacteria
GAT
Ile
>ENV002965
AY934397
178468
Gammaproteobacteria
GAT
Ile
>ENV002973
AY934401
178468
Gammaproteobacteria
GAT
Ile
>ENV002975
AY934402
178468
Gammaproteobacteria
GAT
Ile
>ENV003011
AY934421
178468
Gammaproteobacteria
GAT
Ile
>ENV003012
AY934422
178468
Gammaproteobacteria
GAT
Ile
>ENV002835
AY934322
176256
Gammaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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