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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170011343
APMI01058581
271014
Actinomycetota
GGG
Pro
>WENV170011719
APMI01085027
452897
Actinomycetota
TAC
Val
>WENV170010888
APMI01033442
294305
Actinomycetota
GAT
Ile
>WENV170010943
APMI01035714
270809
Actinomycetota
GGG
Pro
>WENV170011437
APMI01065645
270809
Actinomycetota
GGG
Pro
>WENV170009665
APMI01001457
653670
Actinomycetota
CCG
Arg
>WENV170011188
APMI01048590
660987
Actinomycetota
GGT
Thr
>WENV170009554
APMI01000720
458833
Actinomycetota
TGC
Ala
>WENV170012397
APMI01168224
782485
Actinomycetota
TCC
Gly
>WENV170010034
APMI01007124
452678
Actinomycetota
ACG
Arg
>WENV170010090
APMI01008262
452678
Actinomycetota
ACG
Arg
>WENV170010364
APMI01014951
452678
Actinomycetota
ACG
Arg
>WENV170010529
APMI01019598
452678
Actinomycetota
ACG
Arg
>WENV170010954
APMI01036147
467776
Actinomycetota
GGC
Ala
>WENV170010840
APMI01031162
467776
Actinomycetota
GGC
Ala
>WENV170010744
APMI01027261
467776
Actinomycetota
GGC
Ala
>WENV170009932
APMI01005427
467776
Actinomycetota
GGC
Ala
>WENV170011298
APMI01054637
292076
Actinomycetota
GTC
Asp
>WENV170011295
APMI01054636
292076
Actinomycetota
GTC
Asp
>WENV170010429
APMI01016982
292076
Actinomycetota
GTC
Asp
>WENV170011466
APMI01067364
458396
Actinomycetota
CGC
Ala
>WENV170011744
APMI01087326
458396
Actinomycetota
CGC
Ala
>WENV170011024
APMI01040038
656285
Actinomycetota
CCG
Arg
>WENV170011561
APMI01074392
656285
Actinomycetota
CCG
Arg
>WENV170011854
APMI01097156
656285
Actinomycetota
CCG
Arg
>WENV170012380
APMI01165688
656285
Actinomycetota
CCG
Arg
>WENV170012272
APMI01144357
780262
Actinomycetota
CCC
Gly
>WENV170010798
APMI01029343
780464
Actinomycetota
GCA
Cys
>WENV170011244
APMI01052017
780464
Actinomycetota
GCA
Cys
>WENV170010718
APMI01026060
456345
Actinomycetota
CCA
Trp
>WENV170011930
APMI01104042
456345
Actinomycetota
CCA
Trp
>WENV170012064
APMI01116041
454028
Actinomycetota
GGT
Thr
>WENV170010447
APMI01017302
455138
Actinomycetota
TTC
Glu
>WENV170011044
APMI01041024
116928
Actinomycetota
GAG
Leu
>WENV170010915
APMI01034949
116928
Actinomycetota
GAG
Leu
>WENV170010807
APMI01029780
116928
Actinomycetota
GAG
Leu
>WENV170009510
APMI01000504
116928
Actinomycetota
GAG
Leu
>WENV170010448
APMI01017302
273028
Actinomycetota
GTC
Asp
>WENV170010582
APMI01021292
653547
Actinomycetota
CTG
Gln
>WENV170010955
APMI01036165
653547
Actinomycetota
CTG
Gln
>WENV170011444
APMI01066012
653547
Actinomycetota
CTG
Gln
>WENV170011512
APMI01071244
653547
Actinomycetota
CTG
Gln
>WENV170010428
APMI01016982
477664
Actinomycetota
TTC
Glu
>WENV170011294
APMI01054636
477664
Actinomycetota
TTC
Glu
>WENV170011297
APMI01054637
477664
Actinomycetota
TTC
Glu
>WENV170010953
APMI01036102
458398
Actinomycetota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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