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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170652769
JRYH01023648
454566
Alphaproteobacteria
GAA
Phe
>WENV170652697
JRYH01016230
273805
Alphaproteobacteria
ACG
Arg
>WENV170652674
JRYH01013340
180542
Alphaproteobacteria
TAG
Leu
>WENV170652262
JRYH01000403
277700
Alphaproteobacteria
GTG
His
>WENV170652211
JRYH01000097
456496
Alphaproteobacteria
GAA
Phe
>WENV170652585
JRYH01007411
653532
Alphaproteobacteria
GTT
Asn
>WENV170652422
JRYH01002690
453948
Alphaproteobacteria
GGC
Ala
>WENV170652314
JRYH01000753
294326
Alphaproteobacteria
CCG
Arg
>WENV170652703
JRYH01016733
654986
Alphaproteobacteria
GCC
Gly
>WENV170652234
JRYH01000207
287552
Alphaproteobacteria
GAT
Ile
>WENV170652249
JRYH01000303
659595
Alphaproteobacteria
TTG
Gln
>WENV170652271
JRYH01000461
659595
Alphaproteobacteria
TTG
Gln
>WENV170652754
JRYH01022563
659595
Alphaproteobacteria
TTG
Gln
>WENV170652653
JRYH01011267
663664
Alphaproteobacteria
GAC
Val
>WENV170652405
JRYH01002209
663664
Alphaproteobacteria
GAC
Val
>WENV170652204
JRYH01000079
663664
Alphaproteobacteria
GAC
Val
>WENV170652193
JRYH01000027
663664
Alphaproteobacteria
GAC
Val
>WENV170652483
JRYH01004465
275157
Alphaproteobacteria
TGG
Pro
>WENV170652715
JRYH01018386
270798
Alphaproteobacteria
CGG
Pro
>WENV170652475
JRYH01004051
320024
Alphaproteobacteria
CCT
Arg
>WENV170652810
JRYH01033772
654103
Alphaproteobacteria
GAA
Phe
>WENV170652920
JRYH01105152
780039
Alphaproteobacteria
GCA
Cys
>WENV170652254
JRYH01000325
686623
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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