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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170673406
LAZR01013506
218595
Alphaproteobacteria
CAA
Leu
>WENV170672616
LAZR01000458
241030
Alphaproteobacteria
TCT
Arg
>WENV170673053
LAZR01005069
241030
Alphaproteobacteria
TCT
Arg
>WENV170672447
LAZR01000169
275828
Alphaproteobacteria
GTC
Asp
>WENV170672409
LAZR01000130
273797
Alphaproteobacteria
GGG
Pro
>WENV170672855
LAZR01002684
273797
Alphaproteobacteria
GGG
Pro
>WENV170674121
LAZR01045511
273797
Alphaproteobacteria
GGG
Pro
>WENV170672399
LAZR01000112
452917
Alphaproteobacteria
TAC
Val
>WENV170672869
LAZR01002828
452917
Alphaproteobacteria
TAC
Val
>WENV170672397
LAZR01000112
780326
Alphaproteobacteria
CCC
Gly
>WENV170672793
LAZR01002192
780326
Alphaproteobacteria
CCC
Gly
>WENV170672716
LAZR01001052
452884
Alphaproteobacteria
CCA
Trp
>WENV170672705
LAZR01001012
452884
Alphaproteobacteria
CCA
Trp
>WENV170672266
LAZR01000047
46070
Alphaproteobacteria
CGA
Ser
>WENV170674387
LAZR01062331
46070
Alphaproteobacteria
CGA
Ser
>WENV170672302
LAZR01000055
653534
Alphaproteobacteria
GCC
Gly
>WENV170673964
LAZR01037423
274127
Alphaproteobacteria
GTG
His
>WENV170672754
LAZR01001518
291540
Alphaproteobacteria
TGG
Pro
>WENV170672411
LAZR01000135
291540
Alphaproteobacteria
TGG
Pro
>WENV170672714
LAZR01001044
656001
Alphaproteobacteria
GCC
Gly
>WENV170672303
LAZR01000055
218119
Alphaproteobacteria
>WENV170672715
LAZR01001044
218119
Alphaproteobacteria
>WENV170672354
LAZR01000075
653538
Alphaproteobacteria
TTC
Glu
>WENV170672612
LAZR01000444
653538
Alphaproteobacteria
TTC
Glu
>WENV170672725
LAZR01001159
653538
Alphaproteobacteria
TTC
Glu
>WENV170673685
LAZR01022942
46035
Alphaproteobacteria
GGA
Ser
>WENV170672419
LAZR01000137
661003
Alphaproteobacteria
GAA
Phe
>WENV170672979
LAZR01003963
661003
Alphaproteobacteria
GAA
Phe
>WENV170673182
LAZR01007868
661003
Alphaproteobacteria
GAA
Phe
>WENV170672542
LAZR01000280
780661
Alphaproteobacteria
GCA
Cys
>WENV170672543
LAZR01000281
655359
Alphaproteobacteria
GAC
Val
>WENV170673097
LAZR01006201
655359
Alphaproteobacteria
GAC
Val
>WENV170673720
LAZR01024905
655359
Alphaproteobacteria
GAC
Val
>WENV170672301
LAZR01000055
154065
Alphaproteobacteria
GAG
Leu
>WENV170672713
LAZR01001044
154065
Alphaproteobacteria
GAG
Leu
>WENV170674343
LAZR01058697
456891
Alphaproteobacteria
CGT
Thr
>WENV170672396
LAZR01000111
451742
Alphaproteobacteria
GGC
Ala
>WENV170672721
LAZR01001116
451742
Alphaproteobacteria
GGC
Ala
>WENV170673902
LAZR01034073
653532
Alphaproteobacteria
GTT
Asn
>WENV170673772
LAZR01027850
653532
Alphaproteobacteria
GTT
Asn
>WENV170672398
LAZR01000112
655394
Alphaproteobacteria
GTT
Asn
>WENV170672639
LAZR01000572
655394
Alphaproteobacteria
GTT
Asn
>WENV170672977
LAZR01003930
274131
Alphaproteobacteria
CAT
Met
>WENV170672625
LAZR01000494
655566
Alphaproteobacteria
GAC
Val
>WENV170672498
LAZR01000232
455362
Alphaproteobacteria
TTT
Lys
>WENV170672757
LAZR01001545
455362
Alphaproteobacteria
TTT
Lys
>WENV170672722
LAZR01001140
779636
Alphaproteobacteria
CTG
Gln
>WENV170672679
LAZR01000823
455821
Alphaproteobacteria
CTT
Lys
>WENV170674287
LAZR01055663
653533
Alphaproteobacteria
CAC
Val
>WENV170672362
LAZR01000079
655358
Alphaproteobacteria
TTG
Gln
>WENV170672205
LAZR01000030
46072
Alphaproteobacteria
GCT
Ser
>WENV170674145
LAZR01046621
456892
Alphaproteobacteria
CGC
Ala
>WENV170673894
LAZR01033237
655166
Alphaproteobacteria
CAC
Val
>WENV170672265
LAZR01000047
46222
Alphaproteobacteria
GGA
Ser
>WENV170673120
LAZR01006771
46222
Alphaproteobacteria
GGA
Ser
>WENV170673924
LAZR01034935
46222
Alphaproteobacteria
GGA
Ser
>WENV170672446
LAZR01000169
282325
Alphaproteobacteria
GTC
Asp
>WENV170672500
LAZR01000232
154064
Alphaproteobacteria
CAG
Leu
>WENV170673055
LAZR01005156
154064
Alphaproteobacteria
CAG
Leu
>WENV170672410
LAZR01000132
274133
Alphaproteobacteria
ACG
Arg
>WENV170672458
LAZR01000189
218137
Alphaproteobacteria
TAG
Leu
>WENV170672522
LAZR01000238
218137
Alphaproteobacteria
TAG
Leu
>WENV170673853
LAZR01032169
112802
Alphaproteobacteria
GAG
Leu
>WENV170672784
LAZR01001990
274225
Alphaproteobacteria
CAT
Met
>WENV170674449
LAZR01066470
654103
Alphaproteobacteria
GAA
Phe
>WENV170674178
LAZR01048822
46069
Alphaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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