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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170704306
LLEJ01002600
456530
Gammaproteobacteria
GCC
Gly
>WENV170704376
LLEJ01005009
655112
Gammaproteobacteria
TCC
Gly
>WENV170704349
LLEJ01004613
463603
Gammaproteobacteria
TAC
Val
>WENV170704363
LLEJ01004756
463603
Gammaproteobacteria
TAC
Val
>WENV170704217
LLEJ01000061
273024
Gammaproteobacteria
CAT
Met
>WENV170704218
LLEJ01000061
273024
Gammaproteobacteria
CAT
Met
>WENV170704323
LLEJ01002972
454805
Gammaproteobacteria
GCC
Gly
>WENV170704331
LLEJ01003571
180304
Gammaproteobacteria
TAA
Leu
>WENV170704236
LLEJ01000495
451784
Gammaproteobacteria
GAA
Phe
>WENV170704330
LLEJ01003571
454096
Gammaproteobacteria
GCC
Gly
>WENV170704278
LLEJ01001141
30846
Gammaproteobacteria
TGA
Ser
>WENV170704285
LLEJ01001652
30846
Gammaproteobacteria
TGA
Ser
>WENV170704341
LLEJ01004374
282116
Gammaproteobacteria
GAC
Val
>WENV170704257
LLEJ01000677
273095
Gammaproteobacteria
TGG
Pro
>WENV170704307
LLEJ01002622
273095
Gammaproteobacteria
TGG
Pro
>WENV170704255
LLEJ01000658
273090
Gammaproteobacteria
CCA
Trp
>WENV170704246
LLEJ01000546
273090
Gammaproteobacteria
CCA
Trp
>WENV170704293
LLEJ01002006
179985
Gammaproteobacteria
>WENV170704375
LLEJ01005009
179985
Gammaproteobacteria
>WENV170704256
LLEJ01000677
454095
Gammaproteobacteria
GTG
His
>WENV170704221
LLEJ01000129
298447
Gammaproteobacteria
CAT
Met
>WENV170704334
LLEJ01003957
112665
Gammaproteobacteria
TAA
Leu
>WENV170704364
LLEJ01004854
273702
Gammaproteobacteria
GAT
Ile
>WENV170704366
LLEJ01004874
273702
Gammaproteobacteria
GAT
Ile
>WENV170704283
LLEJ01001494
270822
Gammaproteobacteria
CCA
Trp
>WENV170704253
LLEJ01000628
270929
Gammaproteobacteria
GAT
Ile
>WENV170704346
LLEJ01004613
451837
Gammaproteobacteria
TTC
Glu
>WENV170704361
LLEJ01004756
451837
Gammaproteobacteria
TTC
Glu
>WENV170704378
LLEJ01005177
451837
Gammaproteobacteria
TTC
Glu
>WENV170704347
LLEJ01004613
463602
Gammaproteobacteria
TTT
Lys
>WENV170704362
LLEJ01004756
463602
Gammaproteobacteria
TTT
Lys
>WENV170704231
LLEJ01000289
270823
Gammaproteobacteria
TGG
Pro
>WENV170704287
LLEJ01001700
270823
Gammaproteobacteria
TGG
Pro
>WENV170704333
LLEJ01003939
180300
Gammaproteobacteria
GTA
Tyr
>WENV170704336
LLEJ01004110
180300
Gammaproteobacteria
GTA
Tyr
>WENV170704369
LLEJ01004927
454091
Gammaproteobacteria
GGC
Ala
>WENV170704318
LLEJ01002820
451920
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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