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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV079959
AATO01000014
248752
Betaproteobacteria
GCC
Gly
>WENV079975
AATO01000096
248752
Betaproteobacteria
GCC
Gly
>WENV079991
AATO01000214
248752
Betaproteobacteria
GCC
Gly
>WENV080009
AATO01000562
248752
Betaproteobacteria
GCC
Gly
>WENV080109
AATO01005751
248752
Betaproteobacteria
GCC
Gly
>WENV080194
AATO01011671
248752
Betaproteobacteria
GCC
Gly
>WENV079963
AATO01000024
152520
Betaproteobacteria
ACG
Arg
>WENV080087
AATO01004284
152520
Betaproteobacteria
ACG
Arg
>WENV079947
AATO01000001
60339
Betaproteobacteria
CAG
Leu
>WENV080182
AATO01011127
60339
Betaproteobacteria
CAG
Leu
>WENV080219
AATO01013424
147079
Betaproteobacteria
TTG
Gln
>WENV079957
AATO01000009
304963
Betaproteobacteria
TTC
Glu
>WENV079966
AATO01000038
304963
Betaproteobacteria
TTC
Glu
>WENV080012
AATO01000615
304963
Betaproteobacteria
TTC
Glu
>WENV080017
AATO01000790
304963
Betaproteobacteria
TTC
Glu
>WENV080021
AATO01000892
304963
Betaproteobacteria
TTC
Glu
>WENV080136
AATO01008292
304963
Betaproteobacteria
TTC
Glu
>WENV080206
AATO01012468
304963
Betaproteobacteria
TTC
Glu
>WENV080230
AATO01014972
251462
Betaproteobacteria
GCC
Gly
>WENV079978
AATO01000105
243641
Betaproteobacteria
TAC
Val
>WENV080057
AATO01002545
243641
Betaproteobacteria
TAC
Val
>WENV080155
AATO01009355
243641
Betaproteobacteria
TAC
Val
>WENV080214
AATO01013219
372150
Betaproteobacteria
CAC
Val
>WENV080165
AATO01010583
426829
Betaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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