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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
138 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170613167
FUWD012784367
339149
Alphaproteobacteria
GTT
Asn
>WENV170623351
FUWD013147261
339149
Alphaproteobacteria
GTT
Asn
>WENV170631615
FUWD013358831
339149
Alphaproteobacteria
GTT
Asn
>WENV170601928
FUWD010201427
365250
Alphaproteobacteria
GCC
Gly
>WENV170608328
FUWD010918381
149985
Alphaproteobacteria
ACG
Arg
>WENV170609621
FUWD011451951
152696
Alphaproteobacteria
TCT
Arg
>WENV170603963
FUWD010348420
59361
Alphaproteobacteria
GAG
Leu
>WENV170605610
FUWD010516306
147089
Alphaproteobacteria
ACG
Arg
>WENV170597982
FUWD010021851
267922
Alphaproteobacteria
CCA
Trp
>WENV170626085
FUWD013213423
267922
Alphaproteobacteria
CCA
Trp
>WENV170613161
FUWD012783624
241021
Alphaproteobacteria
GGC
Ala
>WENV170613162
FUWD012783624
241021
Alphaproteobacteria
GGC
Ala
>WENV170613163
FUWD012783624
241021
Alphaproteobacteria
GGC
Ala
>WENV170613081
FUWD012779497
29345
Alphaproteobacteria
CGA
Ser
>WENV170601760
FUWD010192052
113700
Alphaproteobacteria
>WENV170605305
FUWD010469327
113700
Alphaproteobacteria
>WENV170605860
FUWD010559004
113700
Alphaproteobacteria
>WENV170610785
FUWD012053071
113700
Alphaproteobacteria
>WENV170618733
FUWD012983713
113700
Alphaproteobacteria
>WENV170623155
FUWD013138730
113700
Alphaproteobacteria
>WENV170631413
FUWD013351005
113700
Alphaproteobacteria
>WENV170609132
FUWD011286408
361070
Alphaproteobacteria
GCC
Gly
>WENV170605623
FUWD010517439
23468
Alphaproteobacteria
GCT
Ser
>WENV170607592
FUWD010838566
23468
Alphaproteobacteria
GCT
Ser
>WENV170598423
FUWD010034993
185438
Alphaproteobacteria
GAT
Ile
>WENV170598425
FUWD010035072
185438
Alphaproteobacteria
GAT
Ile
>WENV170616503
FUWD012889390
185438
Alphaproteobacteria
GAT
Ile
>WENV170616513
FUWD012889577
185438
Alphaproteobacteria
GAT
Ile
>WENV170616515
FUWD012889578
185438
Alphaproteobacteria
GAT
Ile
>WENV170610209
FUWD011758449
176908
Alphaproteobacteria
GTC
Asp
>WENV170602364
FUWD010231150
338283
Alphaproteobacteria
CAC
Val
>WENV170608245
FUWD010907814
282595
Alphaproteobacteria
CCA
Trp
>WENV170605471
FUWD010490736
148353
Alphaproteobacteria
CAT
Met
>WENV170608867
FUWD011136005
23671
Alphaproteobacteria
CGA
Ser
>WENV170610603
FUWD011965083
23671
Alphaproteobacteria
CGA
Ser
>WENV170603488
FUWD010312463
338282
Alphaproteobacteria
GTT
Asn
>WENV170603971
FUWD010348938
338282
Alphaproteobacteria
GTT
Asn
>WENV170605370
FUWD010478439
338282
Alphaproteobacteria
GTT
Asn
>WENV170607502
FUWD010827889
338282
Alphaproteobacteria
GTT
Asn
>WENV170608255
FUWD010909000
338282
Alphaproteobacteria
GTT
Asn
>WENV170620133
FUWD013026416
338282
Alphaproteobacteria
GTT
Asn
>WENV170628269
FUWD013244259
338282
Alphaproteobacteria
GTT
Asn
>WENV170605328
FUWD010473424
339723
Alphaproteobacteria
>WENV170609194
FUWD011315265
236134
Alphaproteobacteria
TAC
Val
>WENV170604393
FUWD010392856
339846
Alphaproteobacteria
GAC
Val
>WENV170604214
FUWD010374337
23560
Alphaproteobacteria
CGA
Ser
>WENV170613166
FUWD012784367
412154
Alphaproteobacteria
GCA
Cys
>WENV170607404
FUWD010816618
339722
Alphaproteobacteria
TTG
Gln
>WENV170622391
FUWD013101341
251610
Alphaproteobacteria
TGC
Ala
>WENV170630615
FUWD013315758
251610
Alphaproteobacteria
TGC
Ala
>WENV170609042
FUWD011220241
237740
Alphaproteobacteria
TTT
Lys
>WENV170602674
FUWD010252370
147334
Alphaproteobacteria
CAT
Met
>WENV170610809
FUWD012067751
249928
Alphaproteobacteria
TAC
Val
>WENV170604088
FUWD010361375
281594
Alphaproteobacteria
TGT
Thr
>WENV170605263
FUWD010462711
281594
Alphaproteobacteria
TGT
Thr
>WENV170608747
FUWD011067935
281594
Alphaproteobacteria
TGT
Thr
>WENV170608953
FUWD011184454
281594
Alphaproteobacteria
TGT
Thr
>WENV170610261
FUWD011799694
281594
Alphaproteobacteria
TGT
Thr
>WENV170610778
FUWD012051212
281594
Alphaproteobacteria
TGT
Thr
>WENV170621866
FUWD013077010
281594
Alphaproteobacteria
TGT
Thr
>WENV170630061
FUWD013292395
281594
Alphaproteobacteria
TGT
Thr
>WENV170621159
FUWD013050632
413626
Alphaproteobacteria
TCC
Gly
>WENV170629326
FUWD013267257
413626
Alphaproteobacteria
TCC
Gly
>WENV170605686
FUWD010523808
338289
Alphaproteobacteria
GAC
Val
>WENV170605038
FUWD010442623
175748
Alphaproteobacteria
CAT
Met
>WENV170631562
FUWD013357194
59118
Alphaproteobacteria
CAG
Leu
>WENV170623300
FUWD013145222
59118
Alphaproteobacteria
CAG
Leu
>WENV170614972
FUWD012845415
350547
Alphaproteobacteria
GCC
Gly
>WENV170610571
FUWD011951238
28682
Alphaproteobacteria
GGA
Ser
>WENV170625680
FUWD013203174
28682
Alphaproteobacteria
GGA
Ser
>WENV170633902
FUWD013405209
28682
Alphaproteobacteria
GGA
Ser
>WENV170620885
FUWD013042239
192195
Alphaproteobacteria
GTC
Asp
>WENV170623131
FUWD013137385
192195
Alphaproteobacteria
GTC
Asp
>WENV170629038
FUWD013259282
192195
Alphaproteobacteria
GTC
Asp
>WENV170631372
FUWD013350141
192195
Alphaproteobacteria
GTC
Asp
>WENV170616636
FUWD012895206
252148
Alphaproteobacteria
TGT
Thr
>WENV170619252
FUWD013006796
252148
Alphaproteobacteria
TGT
Thr
>WENV170619253
FUWD013006797
252148
Alphaproteobacteria
TGT
Thr
>WENV170624501
FUWD013182348
252148
Alphaproteobacteria
TGT
Thr
>WENV170632786
FUWD013387130
252148
Alphaproteobacteria
TGT
Thr
>WENV170603780
FUWD010334260
23672
Alphaproteobacteria
GCT
Ser
>WENV170603838
FUWD010338471
23672
Alphaproteobacteria
GCT
Ser
>WENV170607367
FUWD010810829
23672
Alphaproteobacteria
GCT
Ser
>WENV170606714
FUWD010716671
235427
Alphaproteobacteria
CCA
Trp
>WENV170603928
FUWD010346111
161002
Alphaproteobacteria
GTG
His
>WENV170619287
FUWD013008221
161002
Alphaproteobacteria
GTG
His
>WENV170605294
FUWD010467601
368915
Alphaproteobacteria
GGT
Thr
>WENV170608858
FUWD011133290
339305
Alphaproteobacteria
GGT
Thr
>WENV170626128
FUWD013214347
260015
Alphaproteobacteria
CTC
Glu
>WENV170608267
FUWD010910591
23648
Alphaproteobacteria
CGA
Ser
>WENV170623494
FUWD013153407
148854
Alphaproteobacteria
GTC
Asp
>WENV170631759
FUWD013364254
148854
Alphaproteobacteria
GTC
Asp
>WENV170603442
FUWD010309256
359842
Alphaproteobacteria
GAC
Val
>WENV170604419
FUWD010395721
359842
Alphaproteobacteria
GAC
Val
>WENV170607412
FUWD010817663
359842
Alphaproteobacteria
GAC
Val
>WENV170610958
FUWD012148291
359842
Alphaproteobacteria
GAC
Val
>WENV170621016
FUWD013046257
359842
Alphaproteobacteria
GAC
Val
>WENV170629176
FUWD013263086
359842
Alphaproteobacteria
GAC
Val
>WENV170600030
FUWD010103372
280207
Alphaproteobacteria
TGC
Ala
>WENV170617935
FUWD012943973
280207
Alphaproteobacteria
TGC
Ala
>WENV170618120
FUWD012952530
280207
Alphaproteobacteria
TGC
Ala
>WENV170608337
FUWD010919584
354623
Alphaproteobacteria
GAC
Val
>WENV170602525
FUWD010242676
241518
Alphaproteobacteria
CCA
Trp
>WENV170605505
FUWD010496339
82948
Alphaproteobacteria
CAA
Leu
>WENV170608557
FUWD011005878
82948
Alphaproteobacteria
CAA
Leu
>WENV170603481
FUWD010311924
344517
Alphaproteobacteria
GTT
Asn
>WENV170610076
FUWD011666367
147283
Alphaproteobacteria
GTG
His
>WENV170608664
FUWD011046599
370641
Alphaproteobacteria
GCC
Gly
>WENV170611458
FUWD012322294
370641
Alphaproteobacteria
GCC
Gly
>WENV170606078
FUWD010602711
187569
Alphaproteobacteria
CCG
Arg
>WENV170615805
FUWD012869183
258529
Alphaproteobacteria
TGC
Ala
>WENV170626056
FUWD013212974
160158
Alphaproteobacteria
GAT
Ile
>WENV170610535
FUWD011936667
412281
Alphaproteobacteria
CTG
Gln
>WENV170623340
FUWD013146271
339464
Alphaproteobacteria
GCC
Gly
>WENV170631603
FUWD013358135
339464
Alphaproteobacteria
GCC
Gly
>WENV170602526
FUWD010242690
369678
Alphaproteobacteria
GGT
Thr
>WENV170606813
FUWD010737912
369678
Alphaproteobacteria
GGT
Thr
>WENV170610568
FUWD011949265
369678
Alphaproteobacteria
GGT
Thr
>WENV170620411
FUWD013031172
152248
Alphaproteobacteria
TGG
Pro
>WENV170628553
FUWD013248704
152248
Alphaproteobacteria
TGG
Pro
>WENV170612792
FUWD012690079
30071
Alphaproteobacteria
CGA
Ser
>WENV170602602
FUWD010247190
339606
Alphaproteobacteria
>WENV170602256
FUWD010223537
412424
Alphaproteobacteria
TCC
Gly
>WENV170603181
FUWD010294175
412424
Alphaproteobacteria
TCC
Gly
>WENV170603740
FUWD010332399
412424
Alphaproteobacteria
TCC
Gly
>WENV170605814
FUWD010546397
412424
Alphaproteobacteria
TCC
Gly
>WENV170605875
FUWD010560072
412424
Alphaproteobacteria
TCC
Gly
>WENV170607354
FUWD010808696
412424
Alphaproteobacteria
TCC
Gly
>WENV170608687
FUWD011051432
412424
Alphaproteobacteria
TCC
Gly
>WENV170619213
FUWD013005084
412424
Alphaproteobacteria
TCC
Gly
>WENV170619214
FUWD013005085
412424
Alphaproteobacteria
TCC
Gly
>WENV170619359
FUWD013011391
150356
Alphaproteobacteria
GTC
Asp
>WENV170605974
FUWD010577940
184904
Alphaproteobacteria
ACG
Arg
>WENV170608287
FUWD010913572
259072
Alphaproteobacteria
CGC
Ala
>WENV170610745
FUWD012034301
236256
Alphaproteobacteria
TAC
Val
>WENV170602390
FUWD010233016
343498
Alphaproteobacteria
GGT
Thr
>WENV170620913
FUWD013043031
147088
Alphaproteobacteria
CCT
Arg
>WENV170629070
FUWD013260021
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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