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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170655018
JTFN01002082
248021
Alphaproteobacteria
CTT
Lys
>WENV170655065
JTFN01003910
98812
Alphaproteobacteria
CAG
Leu
>WENV170655103
JTFN01005119
104569
Alphaproteobacteria
TAG
Leu
>WENV170655146
JTFN01007941
342732
Alphaproteobacteria
CCC
Gly
>WENV170655223
JTFN01012979
345492
Alphaproteobacteria
TAC
Val
>WENV170655260
JTFN01015529
345452
Alphaproteobacteria
GAC
Val
>WENV170655394
JTFN01028065
248021
Alphaproteobacteria
CTT
Lys
>WENV170655411
JTFN01029858
351007
Alphaproteobacteria
TTC
Glu
>WENV170655500
JTFN01039139
239083
Alphaproteobacteria
TGC
Ala
>WENV170655511
JTFN01040070
351007
Alphaproteobacteria
TTC
Glu
>WENV170655563
JTFN01046361
348781
Alphaproteobacteria
GAA
Phe
>WENV170655582
JTFN01048231
351007
Alphaproteobacteria
TTC
Glu
>WENV170655696
JTFN01059045
96640
Alphaproteobacteria
CAA
Leu
>WENV170655726
JTFN01063827
148279
Alphaproteobacteria
TCT
Arg
>WENV170655765
JTFN01070544
351007
Alphaproteobacteria
TTC
Glu
>WENV170656080
JTFN01126508
154227
Alphaproteobacteria
CAT
Met
>WENV170656092
JTFN01130938
195945
Alphaproteobacteria
GAT
Ile
>WENV170656101
JTFN01134060
348781
Alphaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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