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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170655033
JTFN01002319
293332
Gammaproteobacteria
GAA
Phe
>WENV170655035
JTFN01002383
101028
Gammaproteobacteria
GTA
Tyr
>WENV170655041
JTFN01002495
203169
Gammaproteobacteria
GAC
Val
>WENV170655085
JTFN01004263
144952
Gammaproteobacteria
GAT
Ile
>WENV170655099
JTFN01005064
7018
Gammaproteobacteria
GCT
Ser
>WENV170655168
JTFN01009630
107081
Gammaproteobacteria
TAG
Leu
>WENV170655207
JTFN01011456
412230
Gammaproteobacteria
GCA
Cys
>WENV170655210
JTFN01011536
101028
Gammaproteobacteria
GTA
Tyr
>WENV170655221
JTFN01012554
241478
Gammaproteobacteria
TGT
Thr
>WENV170655233
JTFN01013617
147127
Gammaproteobacteria
GTT
Asn
>WENV170655234
JTFN01013617
147127
Gammaproteobacteria
GTT
Asn
>WENV170655239
JTFN01013817
45459
Gammaproteobacteria
GGA
Ser
>WENV170655244
JTFN01014181
189760
Gammaproteobacteria
TGG
Pro
>WENV170655252
JTFN01014614
240082
Gammaproteobacteria
TTT
Lys
>WENV170655253
JTFN01014614
240082
Gammaproteobacteria
TTT
Lys
>WENV170655261
JTFN01015646
147123
Gammaproteobacteria
CAT
Met
>WENV170655262
JTFN01015646
97031
Gammaproteobacteria
TAG
Leu
>WENV170655274
JTFN01016638
103203
Gammaproteobacteria
>WENV170655276
JTFN01016638
237749
Gammaproteobacteria
GGT
Thr
>WENV170655280
JTFN01017000
162437
Gammaproteobacteria
TCT
Arg
>WENV170655306
JTFN01019906
235448
Gammaproteobacteria
CAT
Met
>WENV170655322
JTFN01021195
147777
Gammaproteobacteria
TCT
Arg
>WENV170655353
JTFN01024180
189760
Gammaproteobacteria
TGG
Pro
>WENV170655365
JTFN01025772
235453
Gammaproteobacteria
GAA
Phe
>WENV170655367
JTFN01025772
235451
Gammaproteobacteria
GTT
Asn
>WENV170655369
JTFN01025772
235451
Gammaproteobacteria
GTT
Asn
>WENV170655444
JTFN01032643
237463
Gammaproteobacteria
GTT
Asn
>WENV170655464
JTFN01034748
193275
Gammaproteobacteria
GAT
Ile
>WENV170655503
JTFN01039272
162567
Gammaproteobacteria
CAT
Met
>WENV170655525
JTFN01041503
235449
Gammaproteobacteria
>WENV170655534
JTFN01042464
341109
Gammaproteobacteria
TCC
Gly
>WENV170655535
JTFN01042464
359029
Gammaproteobacteria
GGT
Thr
>WENV170655538
JTFN01042465
341109
Gammaproteobacteria
TCC
Gly
>WENV170655596
JTFN01049707
411729
Gammaproteobacteria
>WENV170655597
JTFN01049867
145548
Gammaproteobacteria
TCT
Arg
>WENV170655605
JTFN01051212
238761
Gammaproteobacteria
TAC
Val
>WENV170655606
JTFN01051212
238761
Gammaproteobacteria
TAC
Val
>WENV170655639
JTFN01053795
235449
Gammaproteobacteria
>WENV170655658
JTFN01055358
313881
Gammaproteobacteria
GGC
Ala
>WENV170655693
JTFN01058889
152460
Gammaproteobacteria
GGG
Pro
>WENV170655699
JTFN01059242
338303
Gammaproteobacteria
>WENV170655702
JTFN01059242
95625
Gammaproteobacteria
TAG
Leu
>WENV170655703
JTFN01059242
342890
Gammaproteobacteria
TTG
Gln
>WENV170655704
JTFN01059242
59175
Gammaproteobacteria
CAG
Leu
>WENV170655744
JTFN01066773
245151
Gammaproteobacteria
GTG
His
>WENV170655746
JTFN01066774
245151
Gammaproteobacteria
GTG
His
>WENV170655756
JTFN01069835
114623
Gammaproteobacteria
GAG
Leu
>WENV170655757
JTFN01069835
195299
Gammaproteobacteria
CAT
Met
>WENV170655775
JTFN01072169
103203
Gammaproteobacteria
>WENV170655795
JTFN01075039
144917
Gammaproteobacteria
>WENV170655801
JTFN01075460
148044
Gammaproteobacteria
GAC
Val
>WENV170655803
JTFN01075964
158396
Gammaproteobacteria
ACG
Arg
>WENV170655804
JTFN01076247
95725
Gammaproteobacteria
CAA
Leu
>WENV170655811
JTFN01078156
44883
Gammaproteobacteria
GGA
Ser
>WENV170655812
JTFN01078194
153036
Gammaproteobacteria
CCT
Arg
>WENV170655832
JTFN01081255
103203
Gammaproteobacteria
>WENV170655833
JTFN01081255
103203
Gammaproteobacteria
>WENV170655834
JTFN01081255
103203
Gammaproteobacteria
>WENV170655838
JTFN01081541
45459
Gammaproteobacteria
GGA
Ser
>WENV170655871
JTFN01089250
235449
Gammaproteobacteria
>WENV170655872
JTFN01089250
235449
Gammaproteobacteria
>WENV170655873
JTFN01089250
235449
Gammaproteobacteria
>WENV170655875
JTFN01089436
193275
Gammaproteobacteria
GAT
Ile
>WENV170655949
JTFN01100561
158396
Gammaproteobacteria
ACG
Arg
>WENV170655951
JTFN01100580
158396
Gammaproteobacteria
ACG
Arg
>WENV170655974
JTFN01105461
341109
Gammaproteobacteria
TCC
Gly
>WENV170655975
JTFN01105461
359029
Gammaproteobacteria
GGT
Thr
>WENV170656019
JTFN01115863
193275
Gammaproteobacteria
GAT
Ile
>WENV170656027
JTFN01117590
158396
Gammaproteobacteria
ACG
Arg
>WENV170656028
JTFN01117701
309581
Gammaproteobacteria
GAA
Phe
>WENV170656050
JTFN01121455
342890
Gammaproteobacteria
TTG
Gln
>WENV170656051
JTFN01121455
107081
Gammaproteobacteria
TAG
Leu
>WENV170656052
JTFN01121455
342890
Gammaproteobacteria
TTG
Gln
>WENV170656053
JTFN01121455
107081
Gammaproteobacteria
TAG
Leu
>WENV170656055
JTFN01121455
342890
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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