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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170668926
LAHQ01128623
119893
Euryarchaeota
CGA
Ser
>WENV170668889
LAHQ01093033
129630
Euryarchaeota
CAT
Met
>WENV170668588
LAHQ01002477
45267
Euryarchaeota
GCT
Ser
>WENV170668820
LAHQ01057109
45267
Euryarchaeota
GCT
Ser
>WENV170668625
LAHQ01006089
147568
Euryarchaeota
GCC
Gly
>WENV170668680
LAHQ01013888
147573
Euryarchaeota
TGC
Ala
>WENV170668622
LAHQ01005627
238541
Euryarchaeota
GTT
Asn
>WENV170668692
LAHQ01015509
339971
Euryarchaeota
GCC
Gly
>WENV170668770
LAHQ01032677
348437
Euryarchaeota
GCG
Arg
>WENV170668834
LAHQ01061972
339835
Euryarchaeota
GCA
Cys
>WENV170668615
LAHQ01005063
339964
Euryarchaeota
GAA
Phe
>WENV170668915
LAHQ01119733
163825
Euryarchaeota
TGT
Thr
>WENV170668848
LAHQ01066061
412356
Euryarchaeota
>WENV170668856
LAHQ01068300
411995
Euryarchaeota
TCC
Gly
>WENV170668731
LAHQ01023100
127184
Euryarchaeota
CTC
Glu
>WENV170668554
LAHQ01000916
129634
Euryarchaeota
TCT
Arg
>WENV170668649
LAHQ01008332
339840
Euryarchaeota
>WENV170668853
LAHQ01067305
127134
Euryarchaeota
TGG
Pro
>WENV170668916
LAHQ01119733
127134
Euryarchaeota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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