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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170699981
LIDZ01000076
237462
Gammaproteobacteria
GTG
His
>WENV170700069
LIDZ01001094
45162
Gammaproteobacteria
GGA
Ser
>WENV170700071
LIDZ01001099
6877
Gammaproteobacteria
GCT
Ser
>WENV170700072
LIDZ01001099
161961
Gammaproteobacteria
ACG
Arg
>WENV170700084
LIDZ01001300
59595
Gammaproteobacteria
GAG
Leu
>WENV170700087
LIDZ01001432
59595
Gammaproteobacteria
GAG
Leu
>WENV170700095
LIDZ01001807
237462
Gammaproteobacteria
GTG
His
>WENV170700099
LIDZ01001855
417139
Gammaproteobacteria
GCA
Cys
>WENV170700100
LIDZ01001855
59391
Gammaproteobacteria
>WENV170700102
LIDZ01002273
95575
Gammaproteobacteria
>WENV170700106
LIDZ01002639
145364
Gammaproteobacteria
GGG
Pro
>WENV170700115
LIDZ01002944
148165
Gammaproteobacteria
GAC
Val
>WENV170700116
LIDZ01002944
161963
Gammaproteobacteria
GAC
Val
>WENV170700117
LIDZ01002944
148165
Gammaproteobacteria
GAC
Val
>WENV170700133
LIDZ01003022
148835
Gammaproteobacteria
CAT
Met
>WENV170700150
LIDZ01004099
236131
Gammaproteobacteria
GAA
Phe
>WENV170700160
LIDZ01004299
3451
Gammaproteobacteria
>WENV170700162
LIDZ01004614
236131
Gammaproteobacteria
GAA
Phe
>WENV170700164
LIDZ01005310
148165
Gammaproteobacteria
GAC
Val
>WENV170700165
LIDZ01005310
161963
Gammaproteobacteria
GAC
Val
>WENV170700167
LIDZ01005507
45459
Gammaproteobacteria
GGA
Ser
>WENV170700168
LIDZ01005649
145335
Gammaproteobacteria
GGG
Pro
>WENV170700170
LIDZ01005670
58733
Gammaproteobacteria
>WENV170700176
LIDZ01005758
95575
Gammaproteobacteria
>WENV170700180
LIDZ01006541
239650
Gammaproteobacteria
TGT
Thr
>WENV170700184
LIDZ01006827
144730
Gammaproteobacteria
CAT
Met
>WENV170700186
LIDZ01006827
144730
Gammaproteobacteria
CAT
Met
>WENV170700219
LIDZ01008441
161961
Gammaproteobacteria
ACG
Arg
>WENV170700220
LIDZ01008441
161961
Gammaproteobacteria
ACG
Arg
>WENV170700221
LIDZ01008441
161961
Gammaproteobacteria
ACG
Arg
>WENV170700250
LIDZ01009451
152743
Gammaproteobacteria
GAC
Val
>WENV170700251
LIDZ01009451
148044
Gammaproteobacteria
GAC
Val
>WENV170700252
LIDZ01009451
152743
Gammaproteobacteria
GAC
Val
>WENV170700284
LIDZ01010394
147373
Gammaproteobacteria
CAT
Met
>WENV170700286
LIDZ01010448
239650
Gammaproteobacteria
TGT
Thr
>WENV170700295
LIDZ01011296
254364
Gammaproteobacteria
TTC
Glu
>WENV170700296
LIDZ01011453
236131
Gammaproteobacteria
GAA
Phe
>WENV170700303
LIDZ01011521
411729
Gammaproteobacteria
>WENV170700304
LIDZ01011521
80618
Gammaproteobacteria
TAA
Leu
>WENV170700309
LIDZ01011724
235837
Gammaproteobacteria
GTT
Asn
>WENV170700325
LIDZ01012591
95633
Gammaproteobacteria
GTA
Tyr
>WENV170700373
LIDZ01012780
96037
Gammaproteobacteria
GTA
Tyr
>WENV170700381
LIDZ01013079
254364
Gammaproteobacteria
TTC
Glu
>WENV170700383
LIDZ01013079
254364
Gammaproteobacteria
TTC
Glu
>WENV170700389
LIDZ01013168
96284
Gammaproteobacteria
CAA
Leu
>WENV170700402
LIDZ01013414
7543
Gammaproteobacteria
GCT
Ser
>WENV170700417
LIDZ01013651
145364
Gammaproteobacteria
GGG
Pro
>WENV170700428
LIDZ01013815
145335
Gammaproteobacteria
GGG
Pro
>WENV170700430
LIDZ01013826
254364
Gammaproteobacteria
TTC
Glu
>WENV170700432
LIDZ01013826
254364
Gammaproteobacteria
TTC
Glu
>WENV170700433
LIDZ01013855
254364
Gammaproteobacteria
TTC
Glu
>WENV170700435
LIDZ01013855
254364
Gammaproteobacteria
TTC
Glu
>WENV170700437
LIDZ01013855
254364
Gammaproteobacteria
TTC
Glu
>WENV170700449
LIDZ01013989
145562
Gammaproteobacteria
CAT
Met
>WENV170700452
LIDZ01014089
239650
Gammaproteobacteria
TGT
Thr
>WENV170700453
LIDZ01014101
254364
Gammaproteobacteria
TTC
Glu
>WENV170700491
LIDZ01014589
254364
Gammaproteobacteria
TTC
Glu
>WENV170700493
LIDZ01014589
254364
Gammaproteobacteria
TTC
Glu
>WENV170700501
LIDZ01014678
239650
Gammaproteobacteria
TGT
Thr
>WENV170700520
LIDZ01014977
237159
Gammaproteobacteria
GTG
His
>WENV170700526
LIDZ01014994
145000
Gammaproteobacteria
GTC
Asp
>WENV170700540
LIDZ01015155
235837
Gammaproteobacteria
GTT
Asn
>WENV170700555
LIDZ01015380
254364
Gammaproteobacteria
TTC
Glu
>WENV170700557
LIDZ01015380
254364
Gammaproteobacteria
TTC
Glu
>WENV170700558
LIDZ01015380
235837
Gammaproteobacteria
GTT
Asn
>WENV170700576
LIDZ01015607
340812
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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