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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170715273
LNQE01001213
147814
Euryarchaeota
TTT
Lys
>WENV170715280
LNQE01001264
45267
Euryarchaeota
GCT
Ser
>WENV170715339
LNQE01001586
45267
Euryarchaeota
GCT
Ser
>WENV170715269
LNQE01001161
127582
Euryarchaeota
CAT
Met
>WENV170715263
LNQE01001090
238541
Euryarchaeota
GTT
Asn
>WENV170715365
LNQE01001808
238541
Euryarchaeota
GTT
Asn
>WENV170715271
LNQE01001209
339971
Euryarchaeota
GCC
Gly
>WENV170715287
LNQE01001298
411995
Euryarchaeota
TCC
Gly
>WENV170715284
LNQE01001275
360399
Euryarchaeota
CGC
Ala
>WENV170715351
LNQE01001642
360399
Euryarchaeota
CGC
Ala
>WENV170715294
LNQE01001339
45268
Euryarchaeota
CGA
Ser
>WENV170715276
LNQE01001228
339967
Euryarchaeota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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