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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
151 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180455142
OBXO01000439
270475
Bacillota
GAA
Phe
>WENV180455301
OBXO01001087
24650
Bacillota
TAA
Leu
>WENV180455654
OBXO01019368
361659
Bacillota
GCC
Gly
>WENV180454715
OBXO01000003
37213
Bacillota
TGA
Ser
>WENV180455302
OBXO01001113
37213
Bacillota
TGA
Ser
>WENV180455489
OBXO01005707
37213
Bacillota
TGA
Ser
>WENV180454739
OBXO01000013
267649
Bacillota
TAC
Val
>WENV180455304
OBXO01001139
267649
Bacillota
TAC
Val
>WENV180455570
OBXO01010839
267649
Bacillota
TAC
Val
>WENV180455701
OBXO01026831
267649
Bacillota
TAC
Val
>WENV180454986
OBXO01000216
339890
Bacillota
TTG
Gln
>WENV180455441
OBXO01003843
10560
Bacillota
GGA
Ser
>WENV180454957
OBXO01000190
338152
Bacillota
TTC
Glu
>WENV180455539
OBXO01008484
338152
Bacillota
TTC
Glu
>WENV180455321
OBXO01001327
356488
Bacillota
TGT
Thr
>WENV180455472
OBXO01005050
356488
Bacillota
TGT
Thr
>WENV180455227
OBXO01000600
235154
Bacillota
GTT
Asn
>WENV180455366
OBXO01002153
241441
Bacillota
GCC
Gly
>WENV180455248
OBXO01000736
17707
Bacillota
GCT
Ser
>WENV180455488
OBXO01005670
246023
Bacillota
TGC
Ala
>WENV180455542
OBXO01008631
256326
Bacillota
TTT
Lys
>WENV180455504
OBXO01006192
147639
Bacillota
ACG
Arg
>WENV180455651
OBXO01019368
354367
Bacillota
TTG
Gln
>WENV180455665
OBXO01020557
162003
Bacillota
GTC
Asp
>WENV180455456
OBXO01004473
97943
Bacillota
GTA
Tyr
>WENV180455459
OBXO01004473
97943
Bacillota
GTA
Tyr
>WENV180455510
OBXO01006655
114359
Bacillota
TAG
Leu
>WENV180455653
OBXO01019368
114359
Bacillota
TAG
Leu
>WENV180455794
OBXO01048644
235137
Bacillota
TGC
Ala
>WENV180455630
OBXO01015755
235294
Bacillota
TGC
Ala
>WENV180455798
OBXO01048761
338208
Bacillota
>WENV180454700
OBXO01000001
340802
Bacillota
TTG
Gln
>WENV180454809
OBXO01000052
340802
Bacillota
TTG
Gln
>WENV180455380
OBXO01002225
16235
Bacillota
>WENV180455259
OBXO01000794
338143
Bacillota
CTC
Glu
>WENV180455533
OBXO01007565
338143
Bacillota
CTC
Glu
>WENV180455748
OBXO01033712
338143
Bacillota
CTC
Glu
>WENV180455532
OBXO01007464
341763
Bacillota
CTC
Glu
>WENV180455511
OBXO01006675
175676
Bacillota
GAT
Ile
>WENV180455026
OBXO01000270
37083
Bacillota
TGA
Ser
>WENV180455297
OBXO01001070
37083
Bacillota
TGA
Ser
>WENV180454961
OBXO01000202
144668
Bacillota
GTC
Asp
>WENV180455194
OBXO01000534
144668
Bacillota
GTC
Asp
>WENV180455299
OBXO01001087
144668
Bacillota
GTC
Asp
>WENV180455466
OBXO01004711
243206
Bacillota
GTG
His
>WENV180455707
OBXO01027265
145606
Bacillota
GTC
Asp
>WENV180455501
OBXO01006192
96498
Bacillota
TAG
Leu
>WENV180455690
OBXO01024966
247057
Bacillota
TGC
Ala
>WENV180455461
OBXO01004536
152125
Bacillota
GTT
Asn
>WENV180454941
OBXO01000160
359258
Bacillota
TTG
Gln
>WENV180455163
OBXO01000459
359258
Bacillota
TTG
Gln
>WENV180455471
OBXO01004940
277230
Bacillota
TGT
Thr
>WENV180455624
OBXO01015395
277230
Bacillota
TGT
Thr
>WENV180455796
OBXO01048725
277230
Bacillota
TGT
Thr
>WENV180454985
OBXO01000216
156937
Bacillota
GTG
His
>WENV180455323
OBXO01001337
156937
Bacillota
GTG
His
>WENV180455710
OBXO01027361
338550
Bacillota
>WENV180455627
OBXO01015395
238853
Bacillota
TAC
Val
>WENV180455770
OBXO01038066
149041
Bacillota
GTC
Asp
>WENV180455611
OBXO01015300
144766
Bacillota
CAT
Met
>WENV180455106
OBXO01000386
37269
Bacillota
TGA
Ser
>WENV180454979
OBXO01000211
155089
Bacillota
CAT
Met
>WENV180455758
OBXO01034926
258936
Bacillota
GGT
Thr
>WENV180454907
OBXO01000125
169968
Bacillota
CAT
Met
>WENV180455233
OBXO01000618
413152
Bacillota
TCC
Gly
>WENV180454799
OBXO01000044
162445
Bacillota
CAT
Met
>WENV180454801
OBXO01000044
162445
Bacillota
CAT
Met
>WENV180455028
OBXO01000282
152492
Bacillota
GGG
Pro
>WENV180455377
OBXO01002201
411585
Bacillota
GCA
Cys
>WENV180455699
OBXO01026494
411585
Bacillota
GCA
Cys
>WENV180454808
OBXO01000052
144610
Bacillota
GTG
His
>WENV180455640
OBXO01017533
268227
Bacillota
CCA
Trp
>WENV180455457
OBXO01004473
263765
Bacillota
TAC
Val
>WENV180455706
OBXO01027265
263765
Bacillota
TAC
Val
>WENV180455656
OBXO01019995
342895
Bacillota
CAT
Met
>WENV180455490
OBXO01005707
10680
Bacillota
GGA
Ser
>WENV180455493
OBXO01005796
18852
Bacillota
GCT
Ser
>WENV180455565
OBXO01010703
18852
Bacillota
GCT
Ser
>WENV180454688
OBXO01000001
239832
Bacillota
TGT
Thr
>WENV180454702
OBXO01000002
239832
Bacillota
TGT
Thr
>WENV180455649
OBXO01019368
150597
Bacillota
TCT
Arg
>WENV180455759
OBXO01035064
250349
Bacillota
GAA
Phe
>WENV180455465
OBXO01004711
413491
Bacillota
CCA
Trp
>WENV180455612
OBXO01015300
144962
Bacillota
CAT
Met
>WENV180455293
OBXO01001070
65679
Bacillota
TAA
Leu
>WENV180454980
OBXO01000213
38124
Bacillota
AAG
Leu
>WENV180455189
OBXO01000528
38124
Bacillota
AAG
Leu
>WENV180454847
OBXO01000077
59296
Bacillota
AAG
Leu
>WENV180455737
OBXO01031709
59296
Bacillota
AAG
Leu
>WENV180455375
OBXO01002201
144767
Bacillota
GTG
His
>WENV180455697
OBXO01026494
144767
Bacillota
GTG
His
>WENV180454967
OBXO01000202
235127
Bacillota
TTT
Lys
>WENV180455055
OBXO01000328
235127
Bacillota
TTT
Lys
>WENV180455071
OBXO01000352
235127
Bacillota
TTT
Lys
>WENV180455201
OBXO01000534
235127
Bacillota
TTT
Lys
>WENV180455777
OBXO01044821
235197
Bacillota
GTC
Asp
>WENV180454698
OBXO01000001
147674
Bacillota
TCT
Arg
>WENV180455052
OBXO01000328
147674
Bacillota
TCT
Arg
>WENV180455198
OBXO01000534
147674
Bacillota
TCT
Arg
>WENV180455782
OBXO01047819
145382
Bacillota
GTC
Asp
>WENV180455468
OBXO01004711
59274
Bacillota
CAA
Leu
>WENV180455379
OBXO01002201
235288
Bacillota
TAC
Val
>WENV180455648
OBXO01019368
411739
Bacillota
TCC
Gly
>WENV180455728
OBXO01030681
411739
Bacillota
TCC
Gly
>WENV180455743
OBXO01032358
235638
Bacillota
GAA
Phe
>WENV180455613
OBXO01015300
163753
Bacillota
TGG
Pro
>WENV180455696
OBXO01026494
163753
Bacillota
TGG
Pro
>WENV180455652
OBXO01019368
237963
Bacillota
TTT
Lys
>WENV180455650
OBXO01019368
279635
Bacillota
GTG
His
>WENV180455074
OBXO01000355
148446
Bacillota
TCT
Arg
>WENV180455294
OBXO01001070
148446
Bacillota
TCT
Arg
>WENV180455390
OBXO01002633
148446
Bacillota
TCT
Arg
>WENV180455687
OBXO01024814
243613
Bacillota
GTG
His
>WENV180454984
OBXO01000216
144672
Bacillota
TCT
Arg
>WENV180455561
OBXO01010061
144672
Bacillota
TCT
Arg
>WENV180455790
OBXO01047966
102996
Bacillota
GTA
Tyr
>WENV180455378
OBXO01002201
144833
Bacillota
ACG
Arg
>WENV180455604
OBXO01014500
269595
Bacillota
GCC
Gly
>WENV180455077
OBXO01000355
269595
Bacillota
GCC
Gly
>WENV180455122
OBXO01000415
269595
Bacillota
GCC
Gly
>WENV180455395
OBXO01002680
269595
Bacillota
GCC
Gly
>WENV180455409
OBXO01002888
269595
Bacillota
GCC
Gly
>WENV180455075
OBXO01000355
360559
Bacillota
TTG
Gln
>WENV180455392
OBXO01002633
360559
Bacillota
TTG
Gln
>WENV180455481
OBXO01005608
360559
Bacillota
TTG
Gln
>WENV180455705
OBXO01027265
353527
Bacillota
TTC
Glu
>WENV180455727
OBXO01030681
353527
Bacillota
TTC
Glu
>WENV180455368
OBXO01002201
144762
Bacillota
TCT
Arg
>WENV180455739
OBXO01032225
144762
Bacillota
TCT
Arg
>WENV180455295
OBXO01001070
148449
Bacillota
GTC
Asp
>WENV180455626
OBXO01015395
148449
Bacillota
GTC
Asp
>WENV180454807
OBXO01000052
157635
Bacillota
TCT
Arg
>WENV180455585
OBXO01012113
248507
Bacillota
CAT
Met
>WENV180454871
OBXO01000103
272488
Bacillota
GAA
Phe
>WENV180454908
OBXO01000125
272488
Bacillota
GAA
Phe
>WENV180454966
OBXO01000202
272488
Bacillota
GAA
Phe
>WENV180455061
OBXO01000333
272488
Bacillota
GAA
Phe
>WENV180455070
OBXO01000352
272488
Bacillota
GAA
Phe
>WENV180455090
OBXO01000362
272488
Bacillota
GAA
Phe
>WENV180455693
OBXO01026097
119513
Bacillota
CAA
Leu
>WENV180454872
OBXO01000103
238945
Bacillota
GCC
Gly
>WENV180455411
OBXO01002916
238945
Bacillota
GCC
Gly
>WENV180455413
OBXO01002916
238945
Bacillota
GCC
Gly
>WENV180455278
OBXO01000908
147496
Bacillota
TCT
Arg
>WENV180455338
OBXO01001527
338533
Bacillota
CCT
Arg
>WENV180455753
OBXO01034241
158721
Bacillota
GAT
Ile
>WENV180455688
OBXO01024814
343027
Bacillota
TTG
Gln
>WENV180455447
OBXO01004131
338131
Bacillota
GCC
Gly
>WENV180455478
OBXO01005456
338131
Bacillota
GCC
Gly
>WENV180455479
OBXO01005554
338131
Bacillota
GCC
Gly
>WENV180455622
OBXO01015347
338207
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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