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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
111 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180822110
ODJT01000017
267632
Actinomycetota
GTT
Asn
>WENV180822395
ODJT01000572
267632
Actinomycetota
GTT
Asn
>WENV180822155
ODJT01000039
235615
Actinomycetota
TGC
Ala
>WENV180822476
ODJT01001331
235615
Actinomycetota
TGC
Ala
>WENV180822371
ODJT01000506
413566
Actinomycetota
CCC
Gly
>WENV180822474
ODJT01001284
413566
Actinomycetota
CCC
Gly
>WENV180822288
ODJT01000208
240126
Actinomycetota
GTG
His
>WENV180822397
ODJT01000581
240126
Actinomycetota
GTG
His
>WENV180822122
ODJT01000021
235606
Actinomycetota
GGT
Thr
>WENV180822381
ODJT01000561
235606
Actinomycetota
GGT
Thr
>WENV180822218
ODJT01000086
246840
Actinomycetota
CAC
Val
>WENV180822282
ODJT01000204
361079
Actinomycetota
CTG
Gln
>WENV180822412
ODJT01000711
340959
Actinomycetota
GTT
Asn
>WENV180822373
ODJT01000527
158373
Actinomycetota
GGG
Pro
>WENV180822541
ODJT01002976
149272
Actinomycetota
TTT
Lys
>WENV180822430
ODJT01000908
418439
Actinomycetota
TCC
Gly
>WENV180822361
ODJT01000454
161605
Actinomycetota
CAT
Met
>WENV180822108
ODJT01000017
145272
Actinomycetota
CAT
Met
>WENV180822354
ODJT01000429
96367
Actinomycetota
GTA
Tyr
>WENV180822162
ODJT01000043
341846
Actinomycetota
TCC
Gly
>WENV180822074
ODJT01000008
235610
Actinomycetota
TGT
Thr
>WENV180822215
ODJT01000086
412871
Actinomycetota
GCA
Cys
>WENV180822073
ODJT01000007
338389
Actinomycetota
CAC
Val
>WENV180822538
ODJT01002750
338389
Actinomycetota
CAC
Val
>WENV180822403
ODJT01000672
235663
Actinomycetota
TTT
Lys
>WENV180822548
ODJT01003514
240122
Actinomycetota
TGT
Thr
>WENV180822154
ODJT01000039
145052
Actinomycetota
GAT
Ile
>WENV180822239
ODJT01000111
241627
Actinomycetota
>WENV180822123
ODJT01000021
338474
Actinomycetota
CAT
Met
>WENV180822187
ODJT01000059
254819
Actinomycetota
CTC
Glu
>WENV180822188
ODJT01000059
254819
Actinomycetota
CTC
Glu
>WENV180822340
ODJT01000401
246789
Actinomycetota
CCT
Arg
>WENV180822189
ODJT01000059
154640
Actinomycetota
CTT
Lys
>WENV180822247
ODJT01000121
16591
Actinomycetota
GAG
Leu
>WENV180822445
ODJT01001059
16591
Actinomycetota
GAG
Leu
>WENV180822535
ODJT01002722
149271
Actinomycetota
CAT
Met
>WENV180822502
ODJT01001716
44930
Actinomycetota
GGA
Ser
>WENV180822243
ODJT01000118
239204
Actinomycetota
CTT
Lys
>WENV180822244
ODJT01000118
239204
Actinomycetota
CTT
Lys
>WENV180822287
ODJT01000204
96366
Actinomycetota
TAG
Leu
>WENV180822518
ODJT01002338
235662
Actinomycetota
TGT
Thr
>WENV180822257
ODJT01000151
37093
Actinomycetota
GAG
Leu
>WENV180822553
ODJT01004143
23975
Actinomycetota
GCT
Ser
>WENV180822124
ODJT01000021
250703
Actinomycetota
CCA
Trp
>WENV180822438
ODJT01000988
148467
Actinomycetota
CAT
Met
>WENV180822439
ODJT01000988
148467
Actinomycetota
CAT
Met
>WENV180822279
ODJT01000194
411740
Actinomycetota
CCC
Gly
>WENV180822491
ODJT01001468
411740
Actinomycetota
CCC
Gly
>WENV180822339
ODJT01000391
235388
Actinomycetota
GTG
His
>WENV180822119
ODJT01000020
148463
Actinomycetota
TAA
Leu
>WENV180822410
ODJT01000687
363051
Actinomycetota
CTG
Gln
>WENV180822222
ODJT01000097
246222
Actinomycetota
CCG
Arg
>WENV180822470
ODJT01001278
246222
Actinomycetota
CCG
Arg
>WENV180822343
ODJT01000407
411682
Actinomycetota
GCA
Cys
>WENV180822607
ODJT01021148
411682
Actinomycetota
GCA
Cys
>WENV180822233
ODJT01000108
260823
Actinomycetota
TGC
Ala
>WENV180822378
ODJT01000551
37359
Actinomycetota
>WENV180822568
ODJT01005821
37359
Actinomycetota
>WENV180822507
ODJT01001830
149270
Actinomycetota
GTC
Asp
>WENV180822293
ODJT01000229
345170
Actinomycetota
TTG
Gln
>WENV180822588
ODJT01011862
45767
Actinomycetota
GGA
Ser
>WENV180822232
ODJT01000108
152190
Actinomycetota
GAT
Ile
>WENV180822285
ODJT01000204
280137
Actinomycetota
CTT
Lys
>WENV180822286
ODJT01000204
280137
Actinomycetota
CTT
Lys
>WENV180822413
ODJT01000711
240123
Actinomycetota
TAC
Val
>WENV180822245
ODJT01000121
345027
Actinomycetota
GTT
Asn
>WENV180822283
ODJT01000204
240121
Actinomycetota
CTC
Glu
>WENV180822284
ODJT01000204
240121
Actinomycetota
CTC
Glu
>WENV180822217
ODJT01000086
162402
Actinomycetota
GGG
Pro
>WENV180822433
ODJT01000919
248046
Actinomycetota
CCA
Trp
>WENV180822212
ODJT01000082
287977
Actinomycetota
GTG
His
>WENV180822408
ODJT01000686
287977
Actinomycetota
GTG
His
>WENV180822295
ODJT01000230
149269
Actinomycetota
TGG
Pro
>WENV180822227
ODJT01000103
11157
Actinomycetota
GCT
Ser
>WENV180822156
ODJT01000039
58781
Actinomycetota
CAG
Leu
>WENV180822461
ODJT01001243
340958
Actinomycetota
TTG
Gln
>WENV180822367
ODJT01000479
235613
Actinomycetota
GAA
Phe
>WENV180822240
ODJT01000111
145085
Actinomycetota
CAA
Leu
>WENV180822448
ODJT01001117
293092
Actinomycetota
CTC
Glu
>WENV180822576
ODJT01008537
293092
Actinomycetota
CTC
Glu
>WENV180822599
ODJT01018108
293092
Actinomycetota
CTC
Glu
>WENV180822234
ODJT01000108
59716
Actinomycetota
CAG
Leu
>WENV180822436
ODJT01000962
59716
Actinomycetota
CAG
Leu
>WENV180822213
ODJT01000082
241612
Actinomycetota
CTT
Lys
>WENV180822382
ODJT01000561
340329
Actinomycetota
CAT
Met
>WENV180822635
ODJT01038977
345177
Actinomycetota
CAC
Val
>WENV180822120
ODJT01000021
280065
Actinomycetota
CGT
Thr
>WENV180822109
ODJT01000017
243424
Actinomycetota
TAC
Val
>WENV180822246
ODJT01000121
254820
Actinomycetota
TAC
Val
>WENV180822101
ODJT01000015
235603
Actinomycetota
CCG
Arg
>WENV180822647
ODJT01044963
37358
Actinomycetota
TGA
Ser
>WENV180822250
ODJT01000133
24777
Actinomycetota
GCT
Ser
>WENV180822270
ODJT01000175
240124
Actinomycetota
CGT
Thr
>WENV180822490
ODJT01001442
240124
Actinomycetota
CGT
Thr
>WENV180822456
ODJT01001192
3306
Actinomycetota
TAT
Ile
>WENV180822457
ODJT01001192
96368
Actinomycetota
TAA
Leu
>WENV180822464
ODJT01001272
96368
Actinomycetota
TAA
Leu
>WENV180822494
ODJT01001531
96368
Actinomycetota
TAA
Leu
>WENV180822425
ODJT01000843
235604
Actinomycetota
CCT
Arg
>WENV180822539
ODJT01002870
235604
Actinomycetota
CCT
Arg
>WENV180822157
ODJT01000040
236216
Actinomycetota
GGC
Ala
>WENV180822260
ODJT01000157
236216
Actinomycetota
GGC
Ala
>WENV180822261
ODJT01000157
236216
Actinomycetota
GGC
Ala
>WENV180822423
ODJT01000805
235768
Actinomycetota
CGT
Thr
>WENV180822512
ODJT01001868
154637
Actinomycetota
CAA
Leu
>WENV180822411
ODJT01000687
285954
Actinomycetota
>WENV180822489
ODJT01001436
235614
Actinomycetota
TAC
Val
>WENV180822294
ODJT01000230
412870
Actinomycetota
TCC
Gly
>WENV180822230
ODJT01000103
16836
Actinomycetota
CGA
Ser
>WENV180822238
ODJT01000111
338388
Actinomycetota
CTG
Gln
>WENV180822394
ODJT01000572
155350
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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