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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181262299
OFFY01002937
148379
Bacillota
CGG
Pro
>WENV181262677
OFFY01015749
237957
Bacillota
GTT
Asn
>WENV181262763
OFFY01027740
202812
Bacillota
CAT
Met
>WENV181262336
OFFY01003246
240192
Bacillota
CTG
Gln
>WENV181262797
OFFY01031422
235287
Bacillota
TTT
Lys
>WENV181262377
OFFY01003829
339890
Bacillota
TTG
Gln
>WENV181262453
OFFY01005393
338152
Bacillota
TTC
Glu
>WENV181261759
OFFY01000241
16567
Bacillota
CGA
Ser
>WENV181262019
OFFY01000936
429443
Bacillota
GCA
Cys
>WENV181262638
OFFY01013460
235150
Bacillota
TGC
Ala
>WENV181261773
OFFY01000284
235294
Bacillota
TGC
Ala
>WENV181262067
OFFY01001173
293599
Bacillota
CTT
Lys
>WENV181262861
OFFY01050125
281701
Bacillota
TGC
Ala
>WENV181262193
OFFY01001849
59655
Bacillota
CAG
Leu
>WENV181261875
OFFY01000515
302152
Bacillota
CTT
Lys
>WENV181261876
OFFY01000515
302152
Bacillota
CTT
Lys
>WENV181261998
OFFY01000838
302152
Bacillota
CTT
Lys
>WENV181262541
OFFY01008096
302152
Bacillota
CTT
Lys
>WENV181262180
OFFY01001741
88657
Bacillota
GTA
Tyr
>WENV181262816
OFFY01034409
16359
Bacillota
CGA
Ser
>WENV181262794
OFFY01031422
116350
Bacillota
TAG
Leu
>WENV181262485
OFFY01006185
258685
Bacillota
CGT
Thr
>WENV181262897
OFFY01064393
149026
Bacillota
TCT
Arg
>WENV181262680
OFFY01015749
247786
Bacillota
CGT
Thr
>WENV181262323
OFFY01003133
243227
Bacillota
GTT
Asn
>WENV181261831
OFFY01000437
41154
Bacillota
TAA
Leu
>WENV181262841
OFFY01040614
247057
Bacillota
TGC
Ala
>WENV181262679
OFFY01015749
385980
Bacillota
TTC
Glu
>WENV181261987
OFFY01000824
238151
Bacillota
>WENV181261658
OFFY01000054
156937
Bacillota
GTG
His
>WENV181262796
OFFY01031422
235290
Bacillota
TTG
Gln
>WENV181262554
OFFY01008543
247747
Bacillota
GGT
Thr
>WENV181262324
OFFY01003165
96360
Bacillota
GTA
Tyr
>WENV181262496
OFFY01006580
16266
Bacillota
GCT
Ser
>WENV181262490
OFFY01006470
256115
Bacillota
CGT
Thr
>WENV181262800
OFFY01031422
144766
Bacillota
CAT
Met
>WENV181262792
OFFY01031422
380750
Bacillota
TGT
Thr
>WENV181261821
OFFY01000404
37269
Bacillota
TGA
Ser
>WENV181262075
OFFY01001218
37269
Bacillota
TGA
Ser
>WENV181262571
OFFY01009737
340131
Bacillota
GTT
Asn
>WENV181262893
OFFY01064392
413152
Bacillota
TCC
Gly
>WENV181261706
OFFY01000140
149024
Bacillota
GGT
Thr
>WENV181261929
OFFY01000688
242750
Bacillota
TAC
Val
>WENV181261692
OFFY01000112
162445
Bacillota
CAT
Met
>WENV181262058
OFFY01001150
162445
Bacillota
CAT
Met
>WENV181262808
OFFY01033015
201704
Bacillota
GAT
Ile
>WENV181261830
OFFY01000437
100326
Bacillota
GTA
Tyr
>WENV181262640
OFFY01013530
301373
Bacillota
CTC
Glu
>WENV181261571
OFFY01000004
147684
Bacillota
ACG
Arg
>WENV181262203
OFFY01001930
147684
Bacillota
ACG
Arg
>WENV181261874
OFFY01000514
239812
Bacillota
CCT
Arg
>WENV181262231
OFFY01002197
18852
Bacillota
GCT
Ser
>WENV181262238
OFFY01002286
185292
Bacillota
ACG
Arg
>WENV181262791
OFFY01031422
235289
Bacillota
GTT
Asn
>WENV181262629
OFFY01012885
339391
Bacillota
TTC
Glu
>WENV181262145
OFFY01001624
85288
Bacillota
GTA
Tyr
>WENV181262375
OFFY01003829
147674
Bacillota
TCT
Arg
>WENV181262089
OFFY01001301
147276
Bacillota
CCT
Arg
>WENV181261988
OFFY01000824
412076
Bacillota
TCC
Gly
>WENV181261986
OFFY01000824
279755
Bacillota
GTC
Asp
>WENV181262795
OFFY01031422
144762
Bacillota
TCT
Arg
>WENV181262943
OFFY01085774
287296
Bacillota
TTT
Lys
>WENV181262678
OFFY01015749
3271
Bacillota
GGA
Ser
>WENV181262668
OFFY01015313
299139
Bacillota
TGC
Ala
>WENV181262048
OFFY01001052
272488
Bacillota
GAA
Phe
>WENV181262146
OFFY01001624
412118
Bacillota
>WENV181262150
OFFY01001624
45160
Bacillota
CAA
Leu
>WENV181262522
OFFY01007373
119513
Bacillota
CAA
Leu
>WENV181262628
OFFY01012885
7065
Bacillota
GCT
Ser
>WENV181262764
OFFY01027740
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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