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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181401897
OFTX01017388
266516
Alphaproteobacteria
TAC
Val
>WENV181401490
OFTX01000408
339360
Alphaproteobacteria
>WENV181401758
OFTX01005189
96031
Alphaproteobacteria
TAG
Leu
>WENV181401908
OFTX01019191
99726
Alphaproteobacteria
TAG
Leu
>WENV181401333
OFTX01000005
29895
Alphaproteobacteria
TGA
Ser
>WENV181401858
OFTX01011423
25586
Alphaproteobacteria
TGA
Ser
>WENV181401889
OFTX01016825
352247
Alphaproteobacteria
TTG
Gln
>WENV181401869
OFTX01012637
96188
Alphaproteobacteria
CAG
Leu
>WENV181401921
OFTX01023184
23685
Alphaproteobacteria
CGA
Ser
>WENV181401664
OFTX01002327
254188
Alphaproteobacteria
CCA
Trp
>WENV181401907
OFTX01019135
170352
Alphaproteobacteria
TCT
Arg
>WENV181401931
OFTX01026900
148300
Alphaproteobacteria
CCA
Trp
>WENV181401347
OFTX01000024
243803
Alphaproteobacteria
CAT
Met
>WENV181401854
OFTX01010945
339495
Alphaproteobacteria
>WENV181401951
OFTX01035140
339495
Alphaproteobacteria
>WENV181401689
OFTX01002745
244489
Alphaproteobacteria
CTT
Lys
>WENV181401924
OFTX01025020
256414
Alphaproteobacteria
CTT
Lys
>WENV181401437
OFTX01000202
350547
Alphaproteobacteria
GCC
Gly
>WENV181401345
OFTX01000019
342876
Alphaproteobacteria
GAC
Val
>WENV181401855
OFTX01011159
146914
Alphaproteobacteria
GTG
His
>WENV181401900
OFTX01017928
16380
Alphaproteobacteria
GCT
Ser
>WENV181401910
OFTX01019981
339464
Alphaproteobacteria
GCC
Gly
>WENV181401752
OFTX01004815
236045
Alphaproteobacteria
CGT
Thr
>WENV181401720
OFTX01003904
259072
Alphaproteobacteria
CGC
Ala
>WENV181401930
OFTX01026334
146915
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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