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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181402030
OFTY01000045
418371
Bacteroidota
CCA
Trp
>WENV181402218
OFTY01000257
418371
Bacteroidota
CCA
Trp
>WENV181401966
OFTY01000004
152285
Bacteroidota
GTG
His
>WENV181402611
OFTY01008353
256428
Bacteroidota
GAA
Phe
>WENV181402407
OFTY01001143
416051
Bacteroidota
CCA
Trp
>WENV181402020
OFTY01000037
260685
Bacteroidota
TTT
Lys
>WENV181402200
OFTY01000230
260685
Bacteroidota
TTT
Lys
>WENV181402650
OFTY01013560
260685
Bacteroidota
TTT
Lys
>WENV181402054
OFTY01000061
338625
Bacteroidota
TTC
Glu
>WENV181402055
OFTY01000061
338625
Bacteroidota
TTC
Glu
>WENV181402028
OFTY01000045
267805
Bacteroidota
TCC
Gly
>WENV181402559
OFTY01004123
151405
Bacteroidota
TGC
Ala
>WENV181401998
OFTY01000023
120392
Bacteroidota
CAA
Leu
>WENV181402033
OFTY01000046
37569
Bacteroidota
TAA
Leu
>WENV181402340
OFTY01000717
352304
Bacteroidota
CCT
Arg
>WENV181402060
OFTY01000072
148318
Bacteroidota
GTT
Asn
>WENV181402113
OFTY01000127
148318
Bacteroidota
GTT
Asn
>WENV181402413
OFTY01001257
148318
Bacteroidota
GTT
Asn
>WENV181401972
OFTY01000004
45845
Bacteroidota
TGA
Ser
>WENV181402031
OFTY01000046
45845
Bacteroidota
TGA
Ser
>WENV181402186
OFTY01000207
235802
Bacteroidota
CAT
Met
>WENV181402253
OFTY01000335
129238
Bacteroidota
TAC
Val
>WENV181402254
OFTY01000335
129238
Bacteroidota
TAC
Val
>WENV181402165
OFTY01000175
150454
Bacteroidota
TGT
Thr
>WENV181402399
OFTY01001086
150454
Bacteroidota
TGT
Thr
>WENV181402400
OFTY01001086
150454
Bacteroidota
TGT
Thr
>WENV181401967
OFTY01000004
113694
Bacteroidota
GTA
Tyr
>WENV181401968
OFTY01000004
342872
Bacteroidota
GGT
Thr
>WENV181402056
OFTY01000062
413596
Bacteroidota
GCA
Cys
>WENV181402032
OFTY01000046
239856
Bacteroidota
GCC
Gly
>WENV181402016
OFTY01000034
97638
Bacteroidota
TAG
Leu
>WENV181402070
OFTY01000081
242581
Bacteroidota
TTT
Lys
>WENV181402071
OFTY01000081
242581
Bacteroidota
TTT
Lys
>WENV181402114
OFTY01000128
128249
Bacteroidota
TGG
Pro
>WENV181402238
OFTY01000295
128249
Bacteroidota
TGG
Pro
>WENV181402296
OFTY01000462
128249
Bacteroidota
TGG
Pro
>WENV181402571
OFTY01004959
128249
Bacteroidota
TGG
Pro
>WENV181402450
OFTY01001728
47714
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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