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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182567136
OJEN01004388
235887
Gammaproteobacteria
GTG
His
>WENV182567198
OJEN01012405
146646
Gammaproteobacteria
TGG
Pro
>WENV182567181
OJEN01009679
199859
Gammaproteobacteria
CAT
Met
>WENV182567207
OJEN01013963
149065
Gammaproteobacteria
CCA
Trp
>WENV182567212
OJEN01015218
147048
Gammaproteobacteria
CCA
Trp
>WENV182566993
OJEN01000330
279385
Gammaproteobacteria
TTT
Lys
>WENV182567012
OJEN01000460
279385
Gammaproteobacteria
TTT
Lys
>WENV182567104
OJEN01002435
113631
Gammaproteobacteria
GTA
Tyr
>WENV182567218
OJEN01016259
283840
Gammaproteobacteria
TTC
Glu
>WENV182567090
OJEN01001915
145368
Gammaproteobacteria
CCT
Arg
>WENV182567188
OJEN01010452
249887
Gammaproteobacteria
GGT
Thr
>WENV182567153
OJEN01005953
95973
Gammaproteobacteria
CAA
Leu
>WENV182567121
OJEN01003631
237225
Gammaproteobacteria
GCC
Gly
>WENV182567161
OJEN01006665
58822
Gammaproteobacteria
CAA
Leu
>WENV182567108
OJEN01002612
95866
Gammaproteobacteria
GTA
Tyr
>WENV182567079
OJEN01001495
240619
Gammaproteobacteria
TGT
Thr
>WENV182567105
OJEN01002435
338534
Gammaproteobacteria
TCC
Gly
>WENV182567221
OJEN01017280
16284
Gammaproteobacteria
TGA
Ser
>WENV182567125
OJEN01003721
311624
Gammaproteobacteria
GTG
His
>WENV182567228
OJEN01018218
145369
Gammaproteobacteria
CGG
Pro
>WENV182567225
OJEN01018181
174801
Gammaproteobacteria
TGG
Pro
>WENV182567065
OJEN01001125
45345
Gammaproteobacteria
GGA
Ser
>WENV182567168
OJEN01007748
59155
Gammaproteobacteria
TAA
Leu
>WENV182567157
OJEN01006279
289927
Gammaproteobacteria
GAA
Phe
>WENV182567138
OJEN01004397
249995
Gammaproteobacteria
TTT
Lys
>WENV182567214
OJEN01015792
6972
Gammaproteobacteria
>WENV182567235
OJEN01022058
23644
Gammaproteobacteria
GGA
Ser
>WENV182567166
OJEN01007748
237708
Gammaproteobacteria
GCC
Gly
>WENV182567006
OJEN01000448
319098
Gammaproteobacteria
TAC
Val
>WENV182567009
OJEN01000455
319098
Gammaproteobacteria
TAC
Val
>WENV182567158
OJEN01006361
149315
Gammaproteobacteria
GAC
Val
>WENV182567169
OJEN01008025
145365
Gammaproteobacteria
GAC
Val
>WENV182567046
OJEN01000885
249882
Gammaproteobacteria
GTT
Asn
>WENV182566948
OJEN01000125
148452
Gammaproteobacteria
CCT
Arg
>WENV182567049
OJEN01000929
148452
Gammaproteobacteria
CCT
Arg
>WENV182567085
OJEN01001633
241136
Gammaproteobacteria
TTG
Gln
>WENV182567185
OJEN01010072
193275
Gammaproteobacteria
GAT
Ile
>WENV182567178
OJEN01009341
235886
Gammaproteobacteria
TTC
Glu
>WENV182567167
OJEN01007748
412217
Gammaproteobacteria
GCA
Cys
>WENV182567073
OJEN01001341
243921
Gammaproteobacteria
TTT
Lys
>WENV182566882
OJEN01000001
247088
Gammaproteobacteria
CCA
Trp
>WENV182567144
OJEN01004922
19282
Gammaproteobacteria
TGA
Ser
>WENV182567215
OJEN01016083
175964
Gammaproteobacteria
CAT
Met
>WENV182567134
OJEN01004388
198797
Gammaproteobacteria
TGG
Pro
>WENV182567091
OJEN01002016
157977
Gammaproteobacteria
TGG
Pro
>WENV182567211
OJEN01015198
45439
Gammaproteobacteria
GGA
Ser
>WENV182567239
OJEN01024630
147049
Gammaproteobacteria
GGG
Pro
>WENV182567122
OJEN01003631
67366
Gammaproteobacteria
TAA
Leu
>WENV182567242
OJEN01026865
59485
Gammaproteobacteria
CAG
Leu
>WENV182567131
OJEN01004241
237711
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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