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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
129 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183297356
OLSM01002437
235146
Actinomycetota
CGT
Thr
>WENV183297487
OLSM01003681
119475
Actinomycetota
TAA
Leu
>WENV183296773
OLSM01000198
235347
Actinomycetota
GGC
Ala
>WENV183297646
OLSM01006204
166493
Actinomycetota
CTT
Lys
>WENV183297695
OLSM01007429
166493
Actinomycetota
CTT
Lys
>WENV183297663
OLSM01006450
235153
Actinomycetota
CCT
Arg
>WENV183297230
OLSM01001458
16400
Actinomycetota
GAG
Leu
>WENV183297519
OLSM01004038
37070
Actinomycetota
CGA
Ser
>WENV183297586
OLSM01005195
37070
Actinomycetota
CGA
Ser
>WENV183297319
OLSM01002110
144600
Actinomycetota
TGG
Pro
>WENV183296754
OLSM01000165
235092
Actinomycetota
CCG
Arg
>WENV183297284
OLSM01001864
235092
Actinomycetota
CCG
Arg
>WENV183297423
OLSM01003010
261773
Actinomycetota
CCT
Arg
>WENV183297473
OLSM01003526
235194
Actinomycetota
GTG
His
>WENV183297354
OLSM01002437
273786
Actinomycetota
CGT
Thr
>WENV183297733
OLSM01008445
158720
Actinomycetota
ACG
Arg
>WENV183298061
OLSM01032258
145346
Actinomycetota
CTT
Lys
>WENV183297583
OLSM01005192
245301
Actinomycetota
GCC
Gly
>WENV183297585
OLSM01005192
245301
Actinomycetota
GCC
Gly
>WENV183297907
OLSM01016391
245301
Actinomycetota
GCC
Gly
>WENV183297417
OLSM01002941
411601
Actinomycetota
CCC
Gly
>WENV183296970
OLSM01000558
144826
Actinomycetota
GGG
Pro
>WENV183297601
OLSM01005416
241401
Actinomycetota
CCA
Trp
>WENV183296881
OLSM01000354
23370
Actinomycetota
GCT
Ser
>WENV183297734
OLSM01008445
147146
Actinomycetota
ACG
Arg
>WENV183297799
OLSM01010241
174149
Actinomycetota
GAT
Ile
>WENV183297804
OLSM01010758
80667
Actinomycetota
CAG
Leu
>WENV183297177
OLSM01001169
338239
Actinomycetota
TTC
Glu
>WENV183297483
OLSM01003617
338239
Actinomycetota
TTC
Glu
>WENV183297266
OLSM01001747
16219
Actinomycetota
GCT
Ser
>WENV183297976
OLSM01020901
44929
Actinomycetota
GGA
Ser
>WENV183296948
OLSM01000521
235174
Actinomycetota
TGC
Ala
>WENV183297175
OLSM01001161
235174
Actinomycetota
TGC
Ala
>WENV183297363
OLSM01002475
235174
Actinomycetota
TGC
Ala
>WENV183297390
OLSM01002593
235174
Actinomycetota
TGC
Ala
>WENV183297800
OLSM01010241
235174
Actinomycetota
TGC
Ala
>WENV183296902
OLSM01000408
235101
Actinomycetota
TTT
Lys
>WENV183296946
OLSM01000517
235101
Actinomycetota
TTT
Lys
>WENV183297620
OLSM01005670
121510
Actinomycetota
TAA
Leu
>WENV183297810
OLSM01010901
235848
Actinomycetota
TTT
Lys
>WENV183297847
OLSM01012905
145423
Actinomycetota
TCT
Arg
>WENV183297410
OLSM01002871
153948
Actinomycetota
GGG
Pro
>WENV183297437
OLSM01003130
44855
Actinomycetota
TGA
Ser
>WENV183298072
OLSM01035819
37212
Actinomycetota
GAG
Leu
>WENV183297857
OLSM01013411
145345
Actinomycetota
TAC
Val
>WENV183297441
OLSM01003181
235199
Actinomycetota
CAC
Val
>WENV183297186
OLSM01001183
44862
Actinomycetota
CGA
Ser
>WENV183297176
OLSM01001163
198659
Actinomycetota
TAC
Val
>WENV183297900
OLSM01016011
121514
Actinomycetota
TAA
Leu
>WENV183296772
OLSM01000198
413665
Actinomycetota
TTG
Gln
>WENV183297439
OLSM01003144
413665
Actinomycetota
TTG
Gln
>WENV183298032
OLSM01027470
235849
Actinomycetota
CCT
Arg
>WENV183297229
OLSM01001451
144593
Actinomycetota
TAT
Ile
>WENV183297850
OLSM01012917
113703
Actinomycetota
TAG
Leu
>WENV183296880
OLSM01000354
144700
Actinomycetota
CAT
Met
>WENV183296936
OLSM01000497
44942
Actinomycetota
TGA
Ser
>WENV183297086
OLSM01000878
45147
Actinomycetota
CGA
Ser
>WENV183296897
OLSM01000404
295695
Actinomycetota
CTC
Glu
>WENV183296968
OLSM01000557
295695
Actinomycetota
CTC
Glu
>WENV183298069
OLSM01035452
98279
Actinomycetota
GTA
Tyr
>WENV183296898
OLSM01000404
338148
Actinomycetota
CTG
Gln
>WENV183296969
OLSM01000557
338148
Actinomycetota
CTG
Gln
>WENV183298036
OLSM01027790
95687
Actinomycetota
TAG
Leu
>WENV183297384
OLSM01002567
235148
Actinomycetota
GTT
Asn
>WENV183297425
OLSM01003013
235148
Actinomycetota
GTT
Asn
>WENV183296940
OLSM01000505
53078
Actinomycetota
GGA
Ser
>WENV183297194
OLSM01001235
53078
Actinomycetota
GGA
Ser
>WENV183297057
OLSM01000745
237792
Actinomycetota
CCT
Arg
>WENV183297317
OLSM01002099
113702
Actinomycetota
TAA
Leu
>WENV183297579
OLSM01005182
176456
Actinomycetota
TCT
Arg
>WENV183297172
OLSM01001159
144825
Actinomycetota
CAT
Met
>WENV183298049
OLSM01029490
151943
Actinomycetota
>WENV183297154
OLSM01001078
145347
Actinomycetota
CAA
Leu
>WENV183297687
OLSM01007094
338139
Actinomycetota
GTT
Asn
>WENV183297688
OLSM01007094
338139
Actinomycetota
GTT
Asn
>WENV183297660
OLSM01006362
235850
Actinomycetota
CCG
Arg
>WENV183298098
OLSM01045163
145344
Actinomycetota
CGG
Pro
>WENV183296952
OLSM01000523
235348
Actinomycetota
CCT
Arg
>WENV183297780
OLSM01009614
237794
Actinomycetota
CCG
Arg
>WENV183296615
OLSM01000041
144907
Actinomycetota
GGG
Pro
>WENV183297248
OLSM01001616
16467
Actinomycetota
GCT
Ser
>WENV183297167
OLSM01001128
411554
Actinomycetota
CCC
Gly
>WENV183297513
OLSM01003964
411554
Actinomycetota
CCC
Gly
>WENV183297355
OLSM01002437
113601
Actinomycetota
TAG
Leu
>WENV183297403
OLSM01002763
144595
Actinomycetota
CAA
Leu
>WENV183297520
OLSM01004055
144595
Actinomycetota
CAA
Leu
>WENV183296920
OLSM01000460
145343
Actinomycetota
GGG
Pro
>WENV183297123
OLSM01000960
145343
Actinomycetota
GGG
Pro
>WENV183298160
OLSM01065674
152215
Actinomycetota
CAT
Met
>WENV183297071
OLSM01000828
235149
Actinomycetota
CCT
Arg
>WENV183297294
OLSM01001945
235149
Actinomycetota
CCT
Arg
>WENV183297352
OLSM01002409
51286
Actinomycetota
TGA
Ser
>WENV183296523
OLSM01000004
240009
Actinomycetota
GGC
Ala
>WENV183297005
OLSM01000610
414234
Actinomycetota
CTG
Gln
>WENV183297285
OLSM01001866
145269
Actinomycetota
CAT
Met
>WENV183297849
OLSM01012917
235121
Actinomycetota
CGT
Thr
>WENV183297155
OLSM01001078
144635
Actinomycetota
TGG
Pro
>WENV183297996
OLSM01023126
61501
Actinomycetota
CAG
Leu
>WENV183296723
OLSM01000132
119485
Actinomycetota
TAA
Leu
>WENV183297770
OLSM01009211
429234
Actinomycetota
CTG
Gln
>WENV183297109
OLSM01000934
80622
Actinomycetota
CAG
Leu
>WENV183297121
OLSM01000959
80622
Actinomycetota
CAG
Leu
>WENV183297297
OLSM01001979
80622
Actinomycetota
CAG
Leu
>WENV183297530
OLSM01004221
80622
Actinomycetota
CAG
Leu
>WENV183297543
OLSM01004391
44851
Actinomycetota
TGA
Ser
>WENV183297566
OLSM01004802
7409
Actinomycetota
CGA
Ser
>WENV183297067
OLSM01000800
16222
Actinomycetota
GAG
Leu
>WENV183297945
OLSM01018093
158513
Actinomycetota
TGG
Pro
>WENV183297420
OLSM01002968
163948
Actinomycetota
CAT
Met
>WENV183297584
OLSM01005192
412834
Actinomycetota
GCA
Cys
>WENV183296949
OLSM01000521
235173
Actinomycetota
GGC
Ala
>WENV183297193
OLSM01001227
235173
Actinomycetota
GGC
Ala
>WENV183297341
OLSM01002305
235173
Actinomycetota
GGC
Ala
>WENV183297364
OLSM01002475
235173
Actinomycetota
GGC
Ala
>WENV183297438
OLSM01003144
235173
Actinomycetota
GGC
Ala
>WENV183297578
OLSM01005147
235173
Actinomycetota
GGC
Ala
>WENV183297828
OLSM01011617
44928
Actinomycetota
TGA
Ser
>WENV183296777
OLSM01000207
243162
Actinomycetota
GTT
Asn
>WENV183297424
OLSM01003013
243162
Actinomycetota
GTT
Asn
>WENV183296763
OLSM01000183
144660
Actinomycetota
TAC
Val
>WENV183297046
OLSM01000705
278447
Actinomycetota
GTG
His
>WENV183297493
OLSM01003780
278447
Actinomycetota
GTG
His
>WENV183297095
OLSM01000896
267574
Actinomycetota
CAC
Val
>WENV183297192
OLSM01001227
267574
Actinomycetota
CAC
Val
>WENV183297581
OLSM01005182
267574
Actinomycetota
CAC
Val
>WENV183296879
OLSM01000354
95593
Actinomycetota
>WENV183297495
OLSM01003797
95593
Actinomycetota
>WENV183297880
OLSM01015108
95593
Actinomycetota
>WENV183297342
OLSM01002345
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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