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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183738127
PJUD01088214
340609
Actinomycetota
GCC
Gly
>WENV183737703
PJUD01023177
243493
Actinomycetota
CCT
Arg
>WENV183738002
PJUD01063473
45831
Actinomycetota
TGA
Ser
>WENV183737165
PJUD01000794
105043
Actinomycetota
TAG
Leu
>WENV183737529
PJUD01013195
251199
Actinomycetota
TTT
Lys
>WENV183738060
PJUD01074545
412084
Actinomycetota
CCC
Gly
>WENV183737473
PJUD01009859
162442
Actinomycetota
GAT
Ile
>WENV183737126
PJUD01000516
148837
Actinomycetota
CAT
Met
>WENV183737237
PJUD01001606
95931
Actinomycetota
GTA
Tyr
>WENV183737017
PJUD01000241
16376
Actinomycetota
CGA
Ser
>WENV183738169
PJUD01101095
16376
Actinomycetota
CGA
Ser
>WENV183737242
PJUD01001777
254605
Actinomycetota
TAA
Leu
>WENV183737684
PJUD01021685
237513
Actinomycetota
ACG
Arg
>WENV183738246
PJUD01135199
310739
Actinomycetota
TTT
Lys
>WENV183738016
PJUD01067333
12308
Actinomycetota
GCT
Ser
>WENV183737283
PJUD01002822
237588
Actinomycetota
TGT
Thr
>WENV183738333
PJUD01165158
237588
Actinomycetota
TGT
Thr
>WENV183738201
PJUD01117390
50066
Actinomycetota
GGA
Ser
>WENV183737729
PJUD01025874
412879
Actinomycetota
TCC
Gly
>WENV183737145
PJUD01000581
392804
Actinomycetota
TTG
Gln
>WENV183737400
PJUD01006342
269853
Actinomycetota
CTC
Glu
>WENV183737399
PJUD01006342
338297
Actinomycetota
CTG
Gln
>WENV183737152
PJUD01000652
179547
Actinomycetota
GGG
Pro
>WENV183738042
PJUD01072710
179547
Actinomycetota
GGG
Pro
>WENV183738276
PJUD01143188
179547
Actinomycetota
GGG
Pro
>WENV183737915
PJUD01050660
193267
Actinomycetota
CAA
Leu
>WENV183737392
PJUD01006141
82645
Actinomycetota
GAG
Leu
>WENV183737125
PJUD01000516
237499
Actinomycetota
GTT
Asn
>WENV183737271
PJUD01002352
401680
Actinomycetota
CTG
Gln
>WENV183737963
PJUD01057405
401680
Actinomycetota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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