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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183743878
PJUK01000020
149229
Betaproteobacteria
TCT
Arg
>WENV183744307
PJUK01006318
146896
Betaproteobacteria
TTG
Gln
>WENV183744191
PJUK01001528
190198
Betaproteobacteria
TTG
Gln
>WENV183744412
PJUK01020095
145694
Betaproteobacteria
ACG
Arg
>WENV183744213
PJUK01002131
146768
Betaproteobacteria
CAT
Met
>WENV183744418
PJUK01022446
16378
Betaproteobacteria
GGA
Ser
>WENV183744386
PJUK01015210
296710
Betaproteobacteria
TTC
Glu
>WENV183744387
PJUK01015210
296710
Betaproteobacteria
TTC
Glu
>WENV183744443
PJUK01029656
308813
Betaproteobacteria
TAC
Val
>WENV183744370
PJUK01013239
238654
Betaproteobacteria
TGT
Thr
>WENV183744345
PJUK01009276
45122
Betaproteobacteria
TGA
Ser
>WENV183744349
PJUK01009770
412167
Betaproteobacteria
GCA
Cys
>WENV183744310
PJUK01006443
145695
Betaproteobacteria
GGG
Pro
>WENV183744264
PJUK01003876
23749
Betaproteobacteria
TGA
Ser
>WENV183744167
PJUK01001122
256728
Betaproteobacteria
GTT
Asn
>WENV183744169
PJUK01001122
256728
Betaproteobacteria
GTT
Asn
>WENV183743823
PJUK01000006
307597
Betaproteobacteria
GTT
Asn
>WENV183743973
PJUK01000081
307597
Betaproteobacteria
GTT
Asn
>WENV183744289
PJUK01004834
292518
Betaproteobacteria
TTT
Lys
>WENV183744460
PJUK01034329
238349
Betaproteobacteria
CTT
Lys
>WENV183744166
PJUK01001122
293915
Betaproteobacteria
GTT
Asn
>WENV183744168
PJUK01001122
293915
Betaproteobacteria
GTT
Asn
>WENV183744284
PJUK01004678
86049
Betaproteobacteria
GTA
Tyr
>WENV183744244
PJUK01002911
338629
Betaproteobacteria
CAC
Val
>WENV183744384
PJUK01015148
95934
Betaproteobacteria
GAG
Leu
>WENV183743987
PJUK01000100
387094
Betaproteobacteria
GGT
Thr
>WENV183744348
PJUK01009649
17930
Betaproteobacteria
GGA
Ser
>WENV183744380
PJUK01014193
415147
Betaproteobacteria
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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