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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170020603
BBPE01014001
358471
Alphaproteobacteria
TGC
Ala
>WENV170020535
BBPE01011003
399001
Alphaproteobacteria
GAC
Val
>WENV170019699
BBPE01000091
207217
Alphaproteobacteria
CCG
Arg
>WENV170020790
BBPE01029086
398981
Alphaproteobacteria
GTT
Asn
>WENV170019681
BBPE01000046
300472
Alphaproteobacteria
GAA
Phe
>WENV170019677
BBPE01000012
287439
Alphaproteobacteria
CCA
Trp
>WENV170019700
BBPE01000093
178733
Alphaproteobacteria
CAT
Met
>WENV170020166
BBPE01003583
195436
Alphaproteobacteria
CCA
Trp
>WENV170020220
BBPE01004338
404744
Alphaproteobacteria
GCC
Gly
>WENV170020401
BBPE01007019
404744
Alphaproteobacteria
GCC
Gly
>WENV170020723
BBPE01020807
400069
Alphaproteobacteria
CAC
Val
>WENV170020718
BBPE01020644
177988
Alphaproteobacteria
ACG
Arg
>WENV170020550
BBPE01011459
398994
Alphaproteobacteria
GTT
Asn
>WENV170020562
BBPE01011975
353624
Alphaproteobacteria
CCA
Trp
>WENV170019797
BBPE01000625
304816
Alphaproteobacteria
CGT
Thr
>WENV170020210
BBPE01004194
428327
Alphaproteobacteria
GCC
Gly
>WENV170019837
BBPE01000920
480900
Alphaproteobacteria
GCA
Cys
>WENV170020676
BBPE01017743
29598
Alphaproteobacteria
GGA
Ser
>WENV170019754
BBPE01000495
176636
Alphaproteobacteria
GGG
Pro
>WENV170020524
BBPE01010430
195438
Alphaproteobacteria
GAT
Ile
>WENV170019719
BBPE01000220
352375
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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