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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170264993
CERD01097106
158246
Gammaproteobacteria
GTC
Asp
>WENV170264377
CERD01029169
281908
Gammaproteobacteria
GTG
His
>WENV170264067
CERD01001861
289658
Gammaproteobacteria
CGT
Thr
>WENV170264794
CERD01070048
123265
Gammaproteobacteria
GAG
Leu
>WENV170265565
CERD01221312
297858
Gammaproteobacteria
TGC
Ala
>WENV170264238
CERD01016676
20664
Gammaproteobacteria
GCT
Ser
>WENV170265271
CERD01125072
73116
Gammaproteobacteria
CAA
Leu
>WENV170264059
CERD01001275
178164
Gammaproteobacteria
GAT
Ile
>WENV170264392
CERD01030509
318157
Gammaproteobacteria
GTT
Asn
>WENV170264695
CERD01060634
184446
Gammaproteobacteria
GAC
Val
>WENV170264694
CERD01060634
208313
Gammaproteobacteria
GAC
Val
>WENV170264145
CERD01008296
118218
Gammaproteobacteria
TAG
Leu
>WENV170264096
CERD01005109
179283
Gammaproteobacteria
ACG
Arg
>WENV170264097
CERD01005109
179283
Gammaproteobacteria
ACG
Arg
>WENV170264098
CERD01005109
179283
Gammaproteobacteria
ACG
Arg
>WENV170264857
CERD01077894
178469
Gammaproteobacteria
CAT
Met
>WENV170264491
CERD01037727
180053
Gammaproteobacteria
CAT
Met
>WENV170264092
CERD01004680
74826
Gammaproteobacteria
TAA
Leu
>WENV170265249
CERD01123434
20618
Gammaproteobacteria
GGA
Ser
>WENV170264753
CERD01066277
179286
Gammaproteobacteria
GGG
Pro
>WENV170264114
CERD01006056
20407
Gammaproteobacteria
TGA
Ser
>WENV170264164
CERD01010738
20407
Gammaproteobacteria
TGA
Ser
>WENV170264894
CERD01082029
20407
Gammaproteobacteria
TGA
Ser
>WENV170264511
CERD01040050
343342
Gammaproteobacteria
>WENV170264564
CERD01045401
73501
Gammaproteobacteria
GAG
Leu
>WENV170264087
CERD01004425
282550
Gammaproteobacteria
TAC
Val
>WENV170264264
CERD01018821
329164
Gammaproteobacteria
TTT
Lys
>WENV170264265
CERD01018821
329164
Gammaproteobacteria
TTT
Lys
>WENV170265591
CERD01226068
178535
Gammaproteobacteria
CCT
Arg
>WENV170264113
CERD01005699
176663
Gammaproteobacteria
GGG
Pro
>WENV170264571
CERD01046771
74339
Gammaproteobacteria
GAG
Leu
>WENV170264288
CERD01021529
178540
Gammaproteobacteria
TGG
Pro
>WENV170264401
CERD01030970
292006
Gammaproteobacteria
TGC
Ala
>WENV170264488
CERD01037482
210406
Gammaproteobacteria
ACG
Arg
>WENV170264489
CERD01037482
210406
Gammaproteobacteria
ACG
Arg
>WENV170264626
CERD01052156
480516
Gammaproteobacteria
GCA
Cys
>WENV170264187
CERD01012458
480516
Gammaproteobacteria
GCA
Cys
>WENV170264112
CERD01005692
480516
Gammaproteobacteria
GCA
Cys
>WENV170264162
CERD01010623
30633
Gammaproteobacteria
GGA
Ser
>WENV170264207
CERD01014173
178466
Gammaproteobacteria
CCA
Trp
>WENV170264045
CERD01000169
197498
Gammaproteobacteria
TGG
Pro
>WENV170264378
CERD01029169
130635
Gammaproteobacteria
TAG
Leu
>WENV170264421
CERD01032747
176545
Gammaproteobacteria
CAT
Met
>WENV170265323
CERD01127628
30632
Gammaproteobacteria
TGA
Ser
>WENV170264966
CERD01093345
401684
Gammaproteobacteria
CCT
Arg
>WENV170264323
CERD01025890
401684
Gammaproteobacteria
CCT
Arg
>WENV170264278
CERD01020080
74048
Gammaproteobacteria
CAA
Leu
>WENV170264111
CERD01005692
306288
Gammaproteobacteria
GCC
Gly
>WENV170264975
CERD01094021
334421
Gammaproteobacteria
TGT
Thr
>WENV170264816
CERD01072893
346373
Gammaproteobacteria
GAA
Phe
>WENV170264301
CERD01023015
73504
Gammaproteobacteria
TAA
Leu
>WENV170265250
CERD01123434
180680
Gammaproteobacteria
GAC
Val
>WENV170264918
CERD01084856
176301
Gammaproteobacteria
GAT
Ile
>WENV170264204
CERD01013946
317792
Gammaproteobacteria
TGC
Ala
>WENV170264284
CERD01021204
317792
Gammaproteobacteria
TGC
Ala
>WENV170264547
CERD01044042
317792
Gammaproteobacteria
TGC
Ala
>WENV170264647
CERD01053739
176665
Gammaproteobacteria
CGG
Pro
>WENV170264759
CERD01067027
231805
Gammaproteobacteria
CAT
Met
>WENV170264569
CERD01046293
231805
Gammaproteobacteria
CAT
Met
>WENV170264058
CERD01001268
231805
Gammaproteobacteria
CAT
Met
>WENV170264163
CERD01010656
178475
Gammaproteobacteria
GAC
Val
>WENV170264379
CERD01029607
180681
Gammaproteobacteria
TGG
Pro
>WENV170264260
CERD01018653
400372
Gammaproteobacteria
CCT
Arg
>WENV170265000
CERD01098045
201377
Gammaproteobacteria
TGG
Pro
>WENV170264300
CERD01023015
481250
Gammaproteobacteria
GCA
Cys
>WENV170265312
CERD01127297
315775
Gammaproteobacteria
TGT
Thr
>WENV170264719
CERD01062282
315775
Gammaproteobacteria
TGT
Thr
>WENV170264307
CERD01023537
81474
Gammaproteobacteria
CAG
Leu
>WENV170264153
CERD01008945
179613
Gammaproteobacteria
CAT
Met
>WENV170264223
CERD01015760
282902
Gammaproteobacteria
TGT
Thr
>WENV170264851
CERD01077132
140861
Gammaproteobacteria
GTA
Tyr
>WENV170264211
CERD01014780
286691
Gammaproteobacteria
GTG
His
>WENV170264940
CERD01088536
178533
Gammaproteobacteria
GGG
Pro
>WENV170265004
CERD01098219
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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