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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170453719
CEVA01000648
280699
Gammaproteobacteria
GGT
Thr
>WENV170453758
CEVA01002317
349758
Gammaproteobacteria
GGC
Ala
>WENV170453760
CEVA01002397
178473
Gammaproteobacteria
TGG
Pro
>WENV170453761
CEVA01002397
184230
Gammaproteobacteria
TCT
Arg
>WENV170453794
CEVA01004874
178540
Gammaproteobacteria
TGG
Pro
>WENV170453842
CEVA01007638
306288
Gammaproteobacteria
GCC
Gly
>WENV170453843
CEVA01007638
480516
Gammaproteobacteria
GCA
Cys
>WENV170453899
CEVA01010966
197233
Gammaproteobacteria
CAT
Met
>WENV170453905
CEVA01011154
282902
Gammaproteobacteria
TGT
Thr
>WENV170453931
CEVA01013137
282902
Gammaproteobacteria
TGT
Thr
>WENV170453953
CEVA01014591
315775
Gammaproteobacteria
TGT
Thr
>WENV170453995
CEVA01017555
176214
Gammaproteobacteria
ACG
Arg
>WENV170453999
CEVA01017697
480516
Gammaproteobacteria
GCA
Cys
>WENV170454001
CEVA01017730
118413
Gammaproteobacteria
TAG
Leu
>WENV170454031
CEVA01018996
480516
Gammaproteobacteria
GCA
Cys
>WENV170454084
CEVA01021936
317792
Gammaproteobacteria
TGC
Ala
>WENV170454135
CEVA01023580
178549
Gammaproteobacteria
GTT
Asn
>WENV170454143
CEVA01024378
180679
Gammaproteobacteria
CCA
Trp
>WENV170454152
CEVA01024773
179283
Gammaproteobacteria
ACG
Arg
>WENV170454158
CEVA01025092
118371
Gammaproteobacteria
CAA
Leu
>WENV170454159
CEVA01025092
178466
Gammaproteobacteria
CCA
Trp
>WENV170454207
CEVA01026929
329164
Gammaproteobacteria
TTT
Lys
>WENV170454208
CEVA01026929
329164
Gammaproteobacteria
TTT
Lys
>WENV170454215
CEVA01027047
176173
Gammaproteobacteria
>WENV170454270
CEVA01029165
180680
Gammaproteobacteria
GAC
Val
>WENV170454299
CEVA01030536
284132
Gammaproteobacteria
TTT
Lys
>WENV170454301
CEVA01030536
179286
Gammaproteobacteria
GGG
Pro
>WENV170454316
CEVA01031509
480397
Gammaproteobacteria
GCA
Cys
>WENV170454318
CEVA01031802
20618
Gammaproteobacteria
GGA
Ser
>WENV170454369
CEVA01035326
353123
Gammaproteobacteria
CCA
Trp
>WENV170454395
CEVA01037171
349758
Gammaproteobacteria
GGC
Ala
>WENV170454403
CEVA01037694
180680
Gammaproteobacteria
GAC
Val
>WENV170454408
CEVA01037859
230011
Gammaproteobacteria
ACG
Arg
>WENV170454453
CEVA01039961
401684
Gammaproteobacteria
CCT
Arg
>WENV170454467
CEVA01040693
290408
Gammaproteobacteria
GCC
Gly
>WENV170454469
CEVA01040807
74048
Gammaproteobacteria
CAA
Leu
>WENV170454477
CEVA01041386
176171
Gammaproteobacteria
CCG
Arg
>WENV170454478
CEVA01041386
280810
Gammaproteobacteria
GTG
His
>WENV170454515
CEVA01043780
183804
Gammaproteobacteria
CAT
Met
>WENV170454530
CEVA01044881
8667
Gammaproteobacteria
GCT
Ser
>WENV170454531
CEVA01044881
178550
Gammaproteobacteria
ACG
Arg
>WENV170454532
CEVA01044881
178550
Gammaproteobacteria
ACG
Arg
>WENV170454536
CEVA01045258
400763
Gammaproteobacteria
TTG
Gln
>WENV170454537
CEVA01045258
121740
Gammaproteobacteria
TAG
Leu
>WENV170454626
CEVA01051075
73498
Gammaproteobacteria
CAA
Leu
>WENV170454699
CEVA01054378
179887
Gammaproteobacteria
GGG
Pro
>WENV170454710
CEVA01055121
178466
Gammaproteobacteria
CCA
Trp
>WENV170454726
CEVA01056399
184459
Gammaproteobacteria
CAT
Met
>WENV170454732
CEVA01056610
186591
Gammaproteobacteria
ACG
Arg
>WENV170454834
CEVA01063736
301064
Gammaproteobacteria
TTT
Lys
>WENV170454835
CEVA01063736
176061
Gammaproteobacteria
TCG
Arg
>WENV170454874
CEVA01066886
315775
Gammaproteobacteria
TGT
Thr
>WENV170454925
CEVA01070876
483085
Gammaproteobacteria
GCA
Cys
>WENV170454934
CEVA01071370
334421
Gammaproteobacteria
TGT
Thr
>WENV170455023
CEVA01077648
346373
Gammaproteobacteria
GAA
Phe
>WENV170455077
CEVA01082222
176242
Gammaproteobacteria
CCG
Arg
>WENV170455161
CEVA01088214
349758
Gammaproteobacteria
GGC
Ala
>WENV170455181
CEVA01089834
176520
Gammaproteobacteria
CAT
Met
>WENV170455201
CEVA01092124
141076
Gammaproteobacteria
GTA
Tyr
>WENV170455205
CEVA01092521
176663
Gammaproteobacteria
GGG
Pro
>WENV170455243
CEVA01096259
338424
Gammaproteobacteria
TAC
Val
>WENV170455254
CEVA01097103
343342
Gammaproteobacteria
>WENV170455268
CEVA01097586
140861
Gammaproteobacteria
GTA
Tyr
>WENV170455282
CEVA01099034
282902
Gammaproteobacteria
TGT
Thr
>WENV170455341
CEVA01102610
176061
Gammaproteobacteria
TCG
Arg
>WENV170455345
CEVA01102984
118414
Gammaproteobacteria
TAG
Leu
>WENV170455391
CEVA01107336
74766
Gammaproteobacteria
CAG
Leu
>WENV170455419
CEVA01109316
284706
Gammaproteobacteria
GTT
Asn
>WENV170455546
CEVA01119990
481678
Gammaproteobacteria
GCA
Cys
>WENV170455724
CEVA01134348
180680
Gammaproteobacteria
GAC
Val
>WENV170455728
CEVA01134797
398943
Gammaproteobacteria
GAC
Val
>WENV170455738
CEVA01136052
176478
Gammaproteobacteria
CAT
Met
>WENV170455752
CEVA01137626
20968
Gammaproteobacteria
TGA
Ser
>WENV170455892
CEVA01150116
315775
Gammaproteobacteria
TGT
Thr
>WENV170456105
CEVA01175228
197498
Gammaproteobacteria
TGG
Pro
>WENV170456136
CEVA01177932
180053
Gammaproteobacteria
CAT
Met
>WENV170456227
CEVA01185199
20618
Gammaproteobacteria
GGA
Ser
>WENV170456250
CEVA01188301
281172
Gammaproteobacteria
CAT
Met
>WENV170456252
CEVA01188366
177028
Gammaproteobacteria
CAT
Met
>WENV170456280
CEVA01191114
401684
Gammaproteobacteria
CCT
Arg
>WENV170456381
CEVA01200349
280692
Gammaproteobacteria
GTT
Asn
>WENV170456383
CEVA01200466
20410
Gammaproteobacteria
TGA
Ser
>WENV170456464
CEVA01206555
74048
Gammaproteobacteria
CAA
Leu
>WENV170456521
CEVA01211167
178168
Gammaproteobacteria
ACG
Arg
>WENV170456587
CEVA01216804
346373
Gammaproteobacteria
GAA
Phe
>WENV170456604
CEVA01218118
180680
Gammaproteobacteria
GAC
Val
>WENV170456611
CEVA01218691
179284
Gammaproteobacteria
CAT
Met
>WENV170456623
CEVA01220009
184459
Gammaproteobacteria
CAT
Met
>WENV170456671
CEVA01224249
218791
Gammaproteobacteria
ACG
Arg
>WENV170456682
CEVA01225010
283966
Gammaproteobacteria
CCT
Arg
>WENV170456703
CEVA01226521
282413
Gammaproteobacteria
GTT
Asn
>WENV170456716
CEVA01227679
349758
Gammaproteobacteria
GGC
Ala
>WENV170456741
CEVA01228848
143504
Gammaproteobacteria
GAG
Leu
>WENV170456790
CEVA01232006
351236
Gammaproteobacteria
TTT
Lys
>WENV170456797
CEVA01232483
329164
Gammaproteobacteria
TTT
Lys
>WENV170456896
CEVA01237917
349758
Gammaproteobacteria
GGC
Ala
>WENV170456959
CEVA01240195
346373
Gammaproteobacteria
GAA
Phe
>WENV170456984
CEVA01241064
20401
Gammaproteobacteria
GGA
Ser
>WENV170457120
CEVA01246728
118257
Gammaproteobacteria
GTA
Tyr
>WENV170457198
CEVA01297529
120827
Gammaproteobacteria
GAG
Leu
>WENV170457234
CEVA01315372
176064
Gammaproteobacteria
CAT
Met
>WENV170457388
CEVA01395899
281283
Gammaproteobacteria
GTG
His
>WENV170457537
CEVA01460552
292006
Gammaproteobacteria
TGC
Ala
>WENV170457750
CEVA01509358
481250
Gammaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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