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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170568478
FLMP01043641
340854
Actinomycetota
TTC
Glu
>WENV170567672
FLMP01003432
191455
Actinomycetota
TGG
Pro
>WENV170568403
FLMP01036656
177601
Actinomycetota
CAT
Met
>WENV170567889
FLMP01008770
405556
Actinomycetota
CTG
Gln
>WENV170568379
FLMP01034732
191257
Actinomycetota
CGG
Pro
>WENV170568578
FLMP01052339
191257
Actinomycetota
CGG
Pro
>WENV170567523
FLMP01001513
291869
Actinomycetota
TGC
Ala
>WENV170567890
FLMP01008770
298505
Actinomycetota
CTC
Glu
>WENV170567422
FLMP01000425
405704
Actinomycetota
GCC
Gly
>WENV170569686
FLMP01269224
480761
Actinomycetota
GCA
Cys
>WENV170568377
FLMP01034551
281661
Actinomycetota
TAC
Val
>WENV170569503
FLMP01219259
343384
Actinomycetota
GCC
Gly
>WENV170568844
FLMP01086326
182527
Actinomycetota
GGG
Pro
>WENV170567522
FLMP01001513
223227
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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