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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170704624
LLEL01012087
176173
Gammaproteobacteria
>WENV170704619
LLEL01010843
283194
Gammaproteobacteria
>WENV170704675
LLEL01031566
283194
Gammaproteobacteria
>WENV170704598
LLEL01005969
76195
Gammaproteobacteria
CAA
Leu
>WENV170704591
LLEL01003711
221027
Gammaproteobacteria
CAT
Met
>WENV170704616
LLEL01009792
221027
Gammaproteobacteria
CAT
Met
>WENV170704685
LLEL01035867
181365
Gammaproteobacteria
CAT
Met
>WENV170704646
LLEL01019273
190582
Gammaproteobacteria
CAT
Met
>WENV170704655
LLEL01023449
176256
Gammaproteobacteria
GAT
Ile
>WENV170704618
LLEL01010843
480397
Gammaproteobacteria
GCA
Cys
>WENV170704684
LLEL01035392
20401
Gammaproteobacteria
GGA
Ser
>WENV170704621
LLEL01011868
56623
Gammaproteobacteria
GGA
Ser
>WENV170704632
LLEL01015543
283195
Gammaproteobacteria
GTT
Asn
>WENV170704615
LLEL01009348
370865
Gammaproteobacteria
TAC
Val
>WENV170704647
LLEL01019273
133738
Gammaproteobacteria
TAG
Leu
>WENV170704664
LLEL01026903
133738
Gammaproteobacteria
TAG
Leu
>WENV170704600
LLEL01007191
334421
Gammaproteobacteria
TGT
Thr
>WENV170704665
LLEL01026903
400349
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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