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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170735597
LULL01005046
123265
Gammaproteobacteria
GAG
Leu
>WENV170735551
LULL01003969
178164
Gammaproteobacteria
GAT
Ile
>WENV170735907
LULL01021461
281275
Gammaproteobacteria
TGT
Thr
>WENV170735609
LULL01005416
20273
Gammaproteobacteria
TGA
Ser
>WENV170735592
LULL01004831
176662
Gammaproteobacteria
ACG
Arg
>WENV170735603
LULL01005327
120827
Gammaproteobacteria
GAG
Leu
>WENV170735474
LULL01002419
218635
Gammaproteobacteria
GAC
Val
>WENV170735416
LULL01001587
176520
Gammaproteobacteria
CAT
Met
>WENV170735272
LULL01000518
99868
Gammaproteobacteria
TAA
Leu
>WENV170735403
LULL01001458
281282
Gammaproteobacteria
TTC
Glu
>WENV170735241
LULL01000334
421616
Gammaproteobacteria
TTG
Gln
>WENV170735961
LULL01026629
329164
Gammaproteobacteria
TTT
Lys
>WENV170736082
LULL01039795
329164
Gammaproteobacteria
TTT
Lys
>WENV170735202
LULL01000241
73532
Gammaproteobacteria
CAA
Leu
>WENV170735389
LULL01001296
176663
Gammaproteobacteria
GGG
Pro
>WENV170735165
LULL01000132
305254
Gammaproteobacteria
CCT
Arg
>WENV170735199
LULL01000227
305254
Gammaproteobacteria
CCT
Arg
>WENV170736135
LULL01050441
313852
Gammaproteobacteria
TTC
Glu
>WENV170735902
LULL01020770
480629
Gammaproteobacteria
GCA
Cys
>WENV170735704
LULL01008560
480516
Gammaproteobacteria
GCA
Cys
>WENV170735831
LULL01015686
46836
Gammaproteobacteria
TAA
Leu
>WENV170735508
LULL01002860
284115
Gammaproteobacteria
TAC
Val
>WENV170735510
LULL01002860
284115
Gammaproteobacteria
TAC
Val
>WENV170735492
LULL01002693
289482
Gammaproteobacteria
TTT
Lys
>WENV170735493
LULL01002693
289482
Gammaproteobacteria
TTT
Lys
>WENV170735703
LULL01008560
306288
Gammaproteobacteria
GCC
Gly
>WENV170735427
LULL01001705
176664
Gammaproteobacteria
CCT
Arg
>WENV170735866
LULL01018187
176301
Gammaproteobacteria
GAT
Ile
>WENV170735243
LULL01000338
34537
Gammaproteobacteria
GGA
Ser
>WENV170736021
LULL01032233
176665
Gammaproteobacteria
CGG
Pro
>WENV170736112
LULL01045332
8609
Gammaproteobacteria
GCT
Ser
>WENV170735356
LULL01001004
23169
Gammaproteobacteria
GGA
Ser
>WENV170735257
LULL01000395
117788
Gammaproteobacteria
TAG
Leu
>WENV170735488
LULL01002582
176478
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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