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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170763519
LWDU01011524
284126
Gammaproteobacteria
>WENV170763931
LWDU01024916
178168
Gammaproteobacteria
ACG
Arg
>WENV170766217
LWDU01040999
178168
Gammaproteobacteria
ACG
Arg
>WENV170766490
LWDU01041787
178168
Gammaproteobacteria
ACG
Arg
>WENV170766526
LWDU01041943
178168
Gammaproteobacteria
ACG
Arg
>WENV170763138
LWDU01002700
73863
Gammaproteobacteria
CAG
Leu
>WENV170765503
LWDU01037668
180053
Gammaproteobacteria
CAT
Met
>WENV170765511
LWDU01037686
314350
Gammaproteobacteria
CCA
Trp
>WENV170762962
LWDU01000651
314350
Gammaproteobacteria
CCA
Trp
>WENV170762843
LWDU01000065
314350
Gammaproteobacteria
CCA
Trp
>WENV170763959
LWDU01025746
180052
Gammaproteobacteria
CCT
Arg
>WENV170762821
LWDU01000016
211156
Gammaproteobacteria
CGG
Pro
>WENV170764122
LWDU01030945
211156
Gammaproteobacteria
CGG
Pro
>WENV170765317
LWDU01037114
287331
Gammaproteobacteria
CTT
Lys
>WENV170765482
LWDU01037637
74339
Gammaproteobacteria
GAG
Leu
>WENV170763836
LWDU01021934
178164
Gammaproteobacteria
GAT
Ile
>WENV170764099
LWDU01030223
183701
Gammaproteobacteria
GAT
Ile
>WENV170765169
LWDU01035259
176301
Gammaproteobacteria
GAT
Ile
>WENV170764688
LWDU01033255
176301
Gammaproteobacteria
GAT
Ile
>WENV170763752
LWDU01018816
176301
Gammaproteobacteria
GAT
Ile
>WENV170763585
LWDU01013282
176301
Gammaproteobacteria
GAT
Ile
>WENV170763219
LWDU01004426
480653
Gammaproteobacteria
GCA
Cys
>WENV170767053
LWDU01044225
480629
Gammaproteobacteria
GCA
Cys
>WENV170766803
LWDU01042886
480629
Gammaproteobacteria
GCA
Cys
>WENV170763550
LWDU01012163
480629
Gammaproteobacteria
GCA
Cys
>WENV170763306
LWDU01006478
480629
Gammaproteobacteria
GCA
Cys
>WENV170765500
LWDU01037662
480516
Gammaproteobacteria
GCA
Cys
>WENV170764940
LWDU01034268
488965
Gammaproteobacteria
GCA
Cys
>WENV170764737
LWDU01033299
488965
Gammaproteobacteria
GCA
Cys
>WENV170767052
LWDU01044225
311084
Gammaproteobacteria
GCC
Gly
>WENV170766771
LWDU01042675
311084
Gammaproteobacteria
GCC
Gly
>WENV170766698
LWDU01042450
311084
Gammaproteobacteria
GCC
Gly
>WENV170763549
LWDU01012163
311084
Gammaproteobacteria
GCC
Gly
>WENV170763305
LWDU01006478
311084
Gammaproteobacteria
GCC
Gly
>WENV170763237
LWDU01004935
311084
Gammaproteobacteria
GCC
Gly
>WENV170765231
LWDU01035978
56623
Gammaproteobacteria
GGA
Ser
>WENV170766765
LWDU01042667
291796
Gammaproteobacteria
GGC
Ala
>WENV170763205
LWDU01004255
291796
Gammaproteobacteria
GGC
Ala
>WENV170763652
LWDU01015348
300318
Gammaproteobacteria
GGC
Ala
>WENV170766483
LWDU01041771
176796
Gammaproteobacteria
GGG
Pro
>WENV170765518
LWDU01037697
140925
Gammaproteobacteria
GTA
Tyr
>WENV170765007
LWDU01034435
158246
Gammaproteobacteria
GTC
Asp
>WENV170766677
LWDU01042402
158246
Gammaproteobacteria
GTC
Asp
>WENV170766760
LWDU01042658
195896
Gammaproteobacteria
GTC
Asp
>WENV170766789
LWDU01042775
195896
Gammaproteobacteria
GTC
Asp
>WENV170766820
LWDU01043024
281791
Gammaproteobacteria
GTG
His
>WENV170766681
LWDU01042424
281791
Gammaproteobacteria
GTG
His
>WENV170766218
LWDU01040999
282899
Gammaproteobacteria
GTT
Asn
>WENV170766491
LWDU01041787
282899
Gammaproteobacteria
GTT
Asn
>WENV170763730
LWDU01018022
299227
Gammaproteobacteria
GTT
Asn
>WENV170766493
LWDU01041789
331330
Gammaproteobacteria
TAC
Val
>WENV170766520
LWDU01041936
331330
Gammaproteobacteria
TAC
Val
>WENV170765515
LWDU01037696
282550
Gammaproteobacteria
TAC
Val
>WENV170763614
LWDU01014383
317782
Gammaproteobacteria
TAC
Val
>WENV170763728
LWDU01017996
282893
Gammaproteobacteria
TAC
Val
>WENV170766233
LWDU01041016
282893
Gammaproteobacteria
TAC
Val
>WENV170766629
LWDU01042318
118414
Gammaproteobacteria
TAG
Leu
>WENV170765519
LWDU01037697
481325
Gammaproteobacteria
TCC
Gly
>WENV170763723
LWDU01017916
226296
Gammaproteobacteria
TCT
Arg
>WENV170766487
LWDU01041786
178167
Gammaproteobacteria
TCT
Arg
>WENV170766515
LWDU01041929
178167
Gammaproteobacteria
TCT
Arg
>WENV170762844
LWDU01000066
20410
Gammaproteobacteria
TGA
Ser
>WENV170764142
LWDU01031558
297858
Gammaproteobacteria
TGC
Ala
>WENV170764100
LWDU01030223
292006
Gammaproteobacteria
TGC
Ala
>WENV170764135
LWDU01031342
317792
Gammaproteobacteria
TGC
Ala
>WENV170765015
LWDU01034457
201377
Gammaproteobacteria
TGG
Pro
>WENV170765517
LWDU01037697
282902
Gammaproteobacteria
TGT
Thr
>WENV170763160
LWDU01003272
282902
Gammaproteobacteria
TGT
Thr
>WENV170766633
LWDU01042322
313852
Gammaproteobacteria
TTC
Glu
>WENV170763200
LWDU01004159
307269
Gammaproteobacteria
TTC
Glu
>WENV170766559
LWDU01042035
287558
Gammaproteobacteria
TTC
Glu
>WENV170766239
LWDU01041029
287558
Gammaproteobacteria
TTC
Glu
>WENV170766238
LWDU01041029
287558
Gammaproteobacteria
TTC
Glu
>WENV170763677
LWDU01016326
287558
Gammaproteobacteria
TTC
Glu
>WENV170763499
LWDU01011110
287558
Gammaproteobacteria
TTC
Glu
>WENV170763308
LWDU01006593
287558
Gammaproteobacteria
TTC
Glu
>WENV170767055
LWDU01044229
405482
Gammaproteobacteria
TTG
Gln
>WENV170766757
LWDU01042656
405482
Gammaproteobacteria
TTG
Gln
>WENV170766682
LWDU01042425
405482
Gammaproteobacteria
TTG
Gln
>WENV170763784
LWDU01019756
405482
Gammaproteobacteria
TTG
Gln
>WENV170766632
LWDU01042321
329164
Gammaproteobacteria
TTT
Lys
>WENV170766880
LWDU01043153
286980
Gammaproteobacteria
TTT
Lys
>WENV170766815
LWDU01042974
286980
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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