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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
155 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170856907
MDTB01001682
292194
Gammaproteobacteria
GGT
Thr
>WENV170857206
MDTB01005794
180679
Gammaproteobacteria
CCA
Trp
>WENV170857393
MDTB01008309
74048
Gammaproteobacteria
CAA
Leu
>WENV170857416
MDTB01008525
329164
Gammaproteobacteria
TTT
Lys
>WENV170857563
MDTB01010821
186591
Gammaproteobacteria
ACG
Arg
>WENV170857570
MDTB01010829
351236
Gammaproteobacteria
TTT
Lys
>WENV170857844
MDTB01014167
299414
Gammaproteobacteria
TTT
Lys
>WENV170858082
MDTB01017509
282902
Gammaproteobacteria
TGT
Thr
>WENV170858117
MDTB01017875
282902
Gammaproteobacteria
TGT
Thr
>WENV170858211
MDTB01019135
242732
Gammaproteobacteria
ACG
Arg
>WENV170858310
MDTB01020781
20487
Gammaproteobacteria
TGA
Ser
>WENV170858426
MDTB01022324
242775
Gammaproteobacteria
TGG
Pro
>WENV170858472
MDTB01023133
226555
Gammaproteobacteria
GTC
Asp
>WENV170858505
MDTB01023779
178466
Gammaproteobacteria
CCA
Trp
>WENV170858509
MDTB01023836
292194
Gammaproteobacteria
GGT
Thr
>WENV170858809
MDTB01027459
179710
Gammaproteobacteria
GAC
Val
>WENV170858891
MDTB01028688
20487
Gammaproteobacteria
TGA
Ser
>WENV170858892
MDTB01028688
8605
Gammaproteobacteria
>WENV170859067
MDTB01031190
488965
Gammaproteobacteria
GCA
Cys
>WENV170859093
MDTB01031433
232119
Gammaproteobacteria
ACG
Arg
>WENV170859094
MDTB01031433
232119
Gammaproteobacteria
ACG
Arg
>WENV170859186
MDTB01032604
400373
Gammaproteobacteria
CCG
Arg
>WENV170859372
MDTB01035253
243308
Gammaproteobacteria
TGG
Pro
>WENV170859459
MDTB01036577
195541
Gammaproteobacteria
TGG
Pro
>WENV170859521
MDTB01037294
283225
Gammaproteobacteria
TGT
Thr
>WENV170859634
MDTB01038907
177028
Gammaproteobacteria
CAT
Met
>WENV170859638
MDTB01038963
20407
Gammaproteobacteria
TGA
Ser
>WENV170859687
MDTB01039707
141076
Gammaproteobacteria
GTA
Tyr
>WENV170859689
MDTB01039707
296672
Gammaproteobacteria
GGT
Thr
>WENV170859887
MDTB01043016
179710
Gammaproteobacteria
GAC
Val
>WENV170859918
MDTB01043643
282018
Gammaproteobacteria
TGT
Thr
>WENV170859987
MDTB01044510
243308
Gammaproteobacteria
TGG
Pro
>WENV170860033
MDTB01045142
178471
Gammaproteobacteria
GTT
Asn
>WENV170860090
MDTB01045890
282018
Gammaproteobacteria
TGT
Thr
>WENV170860101
MDTB01046227
334421
Gammaproteobacteria
TGT
Thr
>WENV170860140
MDTB01046637
480548
Gammaproteobacteria
GCA
Cys
>WENV170860195
MDTB01047500
488965
Gammaproteobacteria
GCA
Cys
>WENV170860391
MDTB01050430
177028
Gammaproteobacteria
CAT
Met
>WENV170860407
MDTB01050582
314350
Gammaproteobacteria
CCA
Trp
>WENV170860429
MDTB01050803
488965
Gammaproteobacteria
GCA
Cys
>WENV170860582
MDTB01053071
284706
Gammaproteobacteria
GTT
Asn
>WENV170860731
MDTB01054951
20487
Gammaproteobacteria
TGA
Ser
>WENV170860948
MDTB01057725
488965
Gammaproteobacteria
GCA
Cys
>WENV170861048
MDTB01059103
179888
Gammaproteobacteria
ACG
Arg
>WENV170861215
MDTB01061043
282018
Gammaproteobacteria
TGT
Thr
>WENV170861308
MDTB01062461
400372
Gammaproteobacteria
CCT
Arg
>WENV170861374
MDTB01063435
158246
Gammaproteobacteria
GTC
Asp
>WENV170861404
MDTB01063906
178467
Gammaproteobacteria
GGG
Pro
>WENV170861427
MDTB01064215
307269
Gammaproteobacteria
TTC
Glu
>WENV170861578
MDTB01066476
287037
Gammaproteobacteria
GTG
His
>WENV170861586
MDTB01066529
488965
Gammaproteobacteria
GCA
Cys
>WENV170861803
MDTB01069332
178475
Gammaproteobacteria
GAC
Val
>WENV170861804
MDTB01069332
184446
Gammaproteobacteria
GAC
Val
>WENV170862049
MDTB01072583
282902
Gammaproteobacteria
TGT
Thr
>WENV170862051
MDTB01072583
481325
Gammaproteobacteria
TCC
Gly
>WENV170862052
MDTB01072583
292194
Gammaproteobacteria
GGT
Thr
>WENV170862486
MDTB01078291
243308
Gammaproteobacteria
TGG
Pro
>WENV170862805
MDTB01082453
8605
Gammaproteobacteria
>WENV170862836
MDTB01082906
181513
Gammaproteobacteria
TGG
Pro
>WENV170863072
MDTB01086231
176301
Gammaproteobacteria
GAT
Ile
>WENV170863092
MDTB01086568
508107
Gammaproteobacteria
GCA
Cys
>WENV170863114
MDTB01086868
178469
Gammaproteobacteria
CAT
Met
>WENV170863128
MDTB01087104
201377
Gammaproteobacteria
TGG
Pro
>WENV170863139
MDTB01087502
283224
Gammaproteobacteria
GAA
Phe
>WENV170863140
MDTB01087502
283225
Gammaproteobacteria
TGT
Thr
>WENV170863222
MDTB01088659
351236
Gammaproteobacteria
TTT
Lys
>WENV170863223
MDTB01088659
351236
Gammaproteobacteria
TTT
Lys
>WENV170863308
MDTB01089647
74048
Gammaproteobacteria
CAA
Leu
>WENV170863364
MDTB01090225
20410
Gammaproteobacteria
TGA
Ser
>WENV170863374
MDTB01090302
21947
Gammaproteobacteria
TGA
Ser
>WENV170863406
MDTB01090798
177028
Gammaproteobacteria
CAT
Met
>WENV170863460
MDTB01091486
243308
Gammaproteobacteria
TGG
Pro
>WENV170863494
MDTB01091777
282550
Gammaproteobacteria
TAC
Val
>WENV170863867
MDTB01097523
179710
Gammaproteobacteria
GAC
Val
>WENV170864012
MDTB01099360
282902
Gammaproteobacteria
TGT
Thr
>WENV170864024
MDTB01099547
351236
Gammaproteobacteria
TTT
Lys
>WENV170864139
MDTB01101341
480941
Gammaproteobacteria
TCC
Gly
>WENV170864207
MDTB01102136
201377
Gammaproteobacteria
TGG
Pro
>WENV170864349
MDTB01104065
488965
Gammaproteobacteria
GCA
Cys
>WENV170864461
MDTB01105605
179710
Gammaproteobacteria
GAC
Val
>WENV170864753
MDTB01109921
176301
Gammaproteobacteria
GAT
Ile
>WENV170865115
MDTB01114909
13452
Gammaproteobacteria
GCT
Ser
>WENV170865116
MDTB01114909
232119
Gammaproteobacteria
ACG
Arg
>WENV170865377
MDTB01118595
281939
Gammaproteobacteria
TTT
Lys
>WENV170865498
MDTB01120102
118205
Gammaproteobacteria
GTA
Tyr
>WENV170865538
MDTB01120714
285547
Gammaproteobacteria
TTG
Gln
>WENV170865952
MDTB01126581
201377
Gammaproteobacteria
TGG
Pro
>WENV170865957
MDTB01126631
401684
Gammaproteobacteria
CCT
Arg
>WENV170866010
MDTB01127368
441770
Gammaproteobacteria
TTG
Gln
>WENV170866140
MDTB01128929
201377
Gammaproteobacteria
TGG
Pro
>WENV170866357
MDTB01131901
118207
Gammaproteobacteria
GAG
Leu
>WENV170866516
MDTB01134347
198943
Gammaproteobacteria
CAT
Met
>WENV170866828
MDTB01137791
283222
Gammaproteobacteria
GTG
His
>WENV170867167
MDTB01142744
118207
Gammaproteobacteria
GAG
Leu
>WENV170867398
MDTB01146209
488965
Gammaproteobacteria
GCA
Cys
>WENV170867411
MDTB01146347
179710
Gammaproteobacteria
GAC
Val
>WENV170867417
MDTB01146404
178466
Gammaproteobacteria
CCA
Trp
>WENV170867427
MDTB01146577
178169
Gammaproteobacteria
GAC
Val
>WENV170867526
MDTB01147501
179189
Gammaproteobacteria
CAT
Met
>WENV170867943
MDTB01154046
282018
Gammaproteobacteria
TGT
Thr
>WENV170867959
MDTB01154352
362004
Gammaproteobacteria
TGT
Thr
>WENV170868012
MDTB01155227
181513
Gammaproteobacteria
TGG
Pro
>WENV170868074
MDTB01156275
118341
Gammaproteobacteria
CAA
Leu
>WENV170868081
MDTB01156431
118341
Gammaproteobacteria
CAA
Leu
>WENV170868157
MDTB01157670
184446
Gammaproteobacteria
GAC
Val
>WENV170868246
MDTB01158883
488965
Gammaproteobacteria
GCA
Cys
>WENV170868262
MDTB01158975
488965
Gammaproteobacteria
GCA
Cys
>WENV170868462
MDTB01162188
488965
Gammaproteobacteria
GCA
Cys
>WENV170868678
MDTB01165385
488965
Gammaproteobacteria
GCA
Cys
>WENV170868687
MDTB01165562
186591
Gammaproteobacteria
ACG
Arg
>WENV170868706
MDTB01165956
201377
Gammaproteobacteria
TGG
Pro
>WENV170868940
MDTB01169451
289384
Gammaproteobacteria
GTG
His
>WENV170869054
MDTB01171068
314350
Gammaproteobacteria
CCA
Trp
>WENV170869127
MDTB01171837
283222
Gammaproteobacteria
GTG
His
>WENV170869239
MDTB01173133
180679
Gammaproteobacteria
CCA
Trp
>WENV170869283
MDTB01173733
314350
Gammaproteobacteria
CCA
Trp
>WENV170869386
MDTB01175370
201377
Gammaproteobacteria
TGG
Pro
>WENV170869525
MDTB01177438
283224
Gammaproteobacteria
GAA
Phe
>WENV170869668
MDTB01180108
20487
Gammaproteobacteria
TGA
Ser
>WENV170869949
MDTB01184265
292174
Gammaproteobacteria
GAA
Phe
>WENV170870143
MDTB01187504
178473
Gammaproteobacteria
TGG
Pro
>WENV170870144
MDTB01187504
184230
Gammaproteobacteria
TCT
Arg
>WENV170870211
MDTB01188406
211156
Gammaproteobacteria
CGG
Pro
>WENV170870250
MDTB01188958
178025
Gammaproteobacteria
GAC
Val
>WENV170870267
MDTB01189247
281939
Gammaproteobacteria
TTT
Lys
>WENV170870434
MDTB01191817
118207
Gammaproteobacteria
GAG
Leu
>WENV170870467
MDTB01192344
178469
Gammaproteobacteria
CAT
Met
>WENV170870631
MDTB01194719
180679
Gammaproteobacteria
CCA
Trp
>WENV170870750
MDTB01196776
176545
Gammaproteobacteria
CAT
Met
>WENV170870762
MDTB01196975
243308
Gammaproteobacteria
TGG
Pro
>WENV170871035
MDTB01200679
178471
Gammaproteobacteria
GTT
Asn
>WENV170871332
MDTB01204168
74048
Gammaproteobacteria
CAA
Leu
>WENV170871334
MDTB01204186
481325
Gammaproteobacteria
TCC
Gly
>WENV170871427
MDTB01205461
488965
Gammaproteobacteria
GCA
Cys
>WENV170871857
MDTB01211217
178471
Gammaproteobacteria
GTT
Asn
>WENV170871905
MDTB01211901
306288
Gammaproteobacteria
GCC
Gly
>WENV170871959
MDTB01212476
334421
Gammaproteobacteria
TGT
Thr
>WENV170872015
MDTB01213243
488965
Gammaproteobacteria
GCA
Cys
>WENV170872220
MDTB01215688
198943
Gammaproteobacteria
CAT
Met
>WENV170872246
MDTB01216052
481678
Gammaproteobacteria
GCA
Cys
>WENV170872247
MDTB01216052
92638
Gammaproteobacteria
TAA
Leu
>WENV170872681
MDTB01221404
370389
Gammaproteobacteria
GGC
Ala
>WENV170872771
MDTB01222683
283224
Gammaproteobacteria
GAA
Phe
>WENV170872789
MDTB01222995
243308
Gammaproteobacteria
TGG
Pro
>WENV170872854
MDTB01224026
176301
Gammaproteobacteria
GAT
Ile
>WENV170872915
MDTB01225091
179710
Gammaproteobacteria
GAC
Val
>WENV170873075
MDTB01227385
282902
Gammaproteobacteria
TGT
Thr
>WENV170873077
MDTB01227385
481325
Gammaproteobacteria
TCC
Gly
>WENV170873236
MDTB01229341
283225
Gammaproteobacteria
TGT
Thr
>WENV170873269
MDTB01229856
311084
Gammaproteobacteria
GCC
Gly
>WENV170873270
MDTB01229856
480629
Gammaproteobacteria
GCA
Cys
>WENV170873396
MDTB01231627
178025
Gammaproteobacteria
GAC
Val
>WENV170873634
MDTB01235435
488965
Gammaproteobacteria
GCA
Cys
>WENV170873835
MDTB01237957
186591
Gammaproteobacteria
ACG
Arg
>WENV170874086
MDTB01241470
20434
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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