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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170965684
MTEV01000080
400361
Gammaproteobacteria
TCC
Gly
>WENV170965689
MTEV01000162
176044
Gammaproteobacteria
GAC
Val
>WENV170965781
MTEV01003563
487002
Gammaproteobacteria
GCA
Cys
>WENV170965870
MTEV01007908
178539
Gammaproteobacteria
GAC
Val
>WENV170965782
MTEV01003563
73781
Gammaproteobacteria
TAA
Leu
>WENV170965813
MTEV01004908
399050
Gammaproteobacteria
CCT
Arg
>WENV170965747
MTEV01001903
197233
Gammaproteobacteria
CAT
Met
>WENV170966038
MTEV01012377
285363
Gammaproteobacteria
TGT
Thr
>WENV170965913
MTEV01009462
178538
Gammaproteobacteria
GTC
Asp
>WENV170965840
MTEV01006462
176520
Gammaproteobacteria
CAT
Met
>WENV170965687
MTEV01000129
284693
Gammaproteobacteria
TTC
Glu
>WENV170965718
MTEV01000928
284693
Gammaproteobacteria
TTC
Glu
>WENV170965771
MTEV01002753
284693
Gammaproteobacteria
TTC
Glu
>WENV170965773
MTEV01002753
284693
Gammaproteobacteria
TTC
Glu
>WENV170965838
MTEV01006323
481357
Gammaproteobacteria
GCA
Cys
>WENV170965786
MTEV01003615
280882
Gammaproteobacteria
GTG
His
>WENV170965692
MTEV01000314
9062
Gammaproteobacteria
GCT
Ser
>WENV170965800
MTEV01004056
74339
Gammaproteobacteria
GAG
Leu
>WENV170965826
MTEV01005852
188969
Gammaproteobacteria
TCT
Arg
>WENV170965898
MTEV01008711
301035
Gammaproteobacteria
CAT
Met
>WENV170965832
MTEV01006054
73827
Gammaproteobacteria
CAG
Leu
>WENV170965926
MTEV01010049
56108
Gammaproteobacteria
TGA
Ser
>WENV170965980
MTEV01011533
398941
Gammaproteobacteria
CTC
Glu
>WENV170965720
MTEV01000928
56340
Gammaproteobacteria
GGA
Ser
>WENV170965789
MTEV01003809
176244
Gammaproteobacteria
TGG
Pro
>WENV170965876
MTEV01008296
490292
Gammaproteobacteria
TCC
Gly
>WENV170965774
MTEV01002783
176241
Gammaproteobacteria
CGG
Pro
>WENV170965978
MTEV01011467
176241
Gammaproteobacteria
CGG
Pro
>WENV170965696
MTEV01000557
303413
Gammaproteobacteria
GGT
Thr
>WENV170965803
MTEV01004347
480368
Gammaproteobacteria
CCC
Gly
>WENV170965897
MTEV01008682
178550
Gammaproteobacteria
ACG
Arg
>WENV170965690
MTEV01000232
293662
Gammaproteobacteria
GGT
Thr
>WENV170965701
MTEV01000611
293662
Gammaproteobacteria
GGT
Thr
>WENV170965738
MTEV01001652
176518
Gammaproteobacteria
CAT
Met
>WENV170966014
MTEV01011691
416836
Gammaproteobacteria
TAC
Val
>WENV170965845
MTEV01006612
284316
Gammaproteobacteria
TGT
Thr
>WENV170965682
MTEV01000080
295821
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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