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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV171003722
NNBV01000517
178327
Alphaproteobacteria
GTG
His
>WENV171003751
NNBV01000600
29671
Alphaproteobacteria
TGA
Ser
>WENV171003753
NNBV01000600
178328
Alphaproteobacteria
TGG
Pro
>WENV171003757
NNBV01000645
400274
Alphaproteobacteria
TTT
Lys
>WENV171003761
NNBV01000658
283066
Alphaproteobacteria
CAT
Met
>WENV171003784
NNBV01000766
156091
Alphaproteobacteria
GGG
Pro
>WENV171003800
NNBV01000929
290520
Alphaproteobacteria
TAC
Val
>WENV171003808
NNBV01001047
180177
Alphaproteobacteria
CCT
Arg
>WENV171003816
NNBV01001243
398980
Alphaproteobacteria
GAC
Val
>WENV171003818
NNBV01001290
29571
Alphaproteobacteria
CGA
Ser
>WENV171003893
NNBV01004661
178263
Alphaproteobacteria
GTG
His
>WENV171003898
NNBV01004661
118150
Alphaproteobacteria
TAG
Leu
>WENV171003900
NNBV01004661
73523
Alphaproteobacteria
CAG
Leu
>WENV171003902
NNBV01004661
282981
Alphaproteobacteria
CCA
Trp
>WENV171003907
NNBV01004662
178630
Alphaproteobacteria
GAT
Ile
>WENV171003911
NNBV01004662
480900
Alphaproteobacteria
GCA
Cys
>WENV171003912
NNBV01004662
345907
Alphaproteobacteria
CGT
Thr
>WENV171003918
NNBV01004667
233665
Alphaproteobacteria
CCT
Arg
>WENV171003923
NNBV01004670
431636
Alphaproteobacteria
CTC
Glu
>WENV171003925
NNBV01004670
282977
Alphaproteobacteria
CAT
Met
>WENV171003930
NNBV01004675
29656
Alphaproteobacteria
CGA
Ser
>WENV171003942
NNBV01004745
289046
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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