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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
115 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180728359
ODGU01042356
285875
Actinomycetota
TAC
Val
>WENV180728882
ODGU01115609
293206
Actinomycetota
GGT
Thr
>WENV180726711
ODGU01000305
423546
Actinomycetota
CTG
Gln
>WENV180728250
ODGU01033355
293204
Actinomycetota
GGC
Ala
>WENV180726408
ODGU01000012
180084
Actinomycetota
CAT
Met
>WENV180728578
ODGU01066212
293195
Actinomycetota
TCT
Arg
>WENV180727308
ODGU01004112
293195
Actinomycetota
TCT
Arg
>WENV180729168
ODGU01234847
74117
Actinomycetota
CAG
Leu
>WENV180728584
ODGU01066769
309930
Actinomycetota
GTT
Asn
>WENV180727946
ODGU01017752
309930
Actinomycetota
GTT
Asn
>WENV180728008
ODGU01019660
484727
Actinomycetota
CCC
Gly
>WENV180726814
ODGU01000610
484727
Actinomycetota
CCC
Gly
>WENV180728898
ODGU01118315
31036
Actinomycetota
GCT
Ser
>WENV180728579
ODGU01066225
293199
Actinomycetota
TTT
Lys
>WENV180728284
ODGU01036027
293199
Actinomycetota
TTT
Lys
>WENV180726609
ODGU01000176
280985
Actinomycetota
TTC
Glu
>WENV180728309
ODGU01037945
46948
Actinomycetota
>WENV180726601
ODGU01000166
176560
Actinomycetota
CAT
Met
>WENV180727286
ODGU01003923
118695
Actinomycetota
TAG
Leu
>WENV180729209
ODGU01257956
284890
Actinomycetota
CTT
Lys
>WENV180729225
ODGU01265935
400421
Actinomycetota
GAC
Val
>WENV180728107
ODGU01024675
401853
Actinomycetota
GTT
Asn
>WENV180728159
ODGU01028323
401853
Actinomycetota
GTT
Asn
>WENV180727873
ODGU01014528
184156
Actinomycetota
GAT
Ile
>WENV180726573
ODGU01000126
184156
Actinomycetota
GAT
Ile
>WENV180727700
ODGU01010123
180946
Actinomycetota
TTT
Lys
>WENV180728127
ODGU01025925
180946
Actinomycetota
TTT
Lys
>WENV180728310
ODGU01038118
284889
Actinomycetota
CTC
Glu
>WENV180729223
ODGU01265935
281115
Actinomycetota
>WENV180727845
ODGU01013681
285874
Actinomycetota
TGT
Thr
>WENV180728635
ODGU01072734
30089
Actinomycetota
GCT
Ser
>WENV180728526
ODGU01057742
186055
Actinomycetota
ACG
Arg
>WENV180726564
ODGU01000114
73081
Actinomycetota
CAG
Leu
>WENV180726608
ODGU01000176
281043
Actinomycetota
TTT
Lys
>WENV180728400
ODGU01046493
401852
Actinomycetota
TTG
Gln
>WENV180727257
ODGU01003523
184493
Actinomycetota
GGG
Pro
>WENV180727642
ODGU01008857
184493
Actinomycetota
GGG
Pro
>WENV180728243
ODGU01033154
401184
Actinomycetota
CAT
Met
>WENV180726610
ODGU01000176
202982
Actinomycetota
GTC
Asp
>WENV180726611
ODGU01000176
202982
Actinomycetota
GTC
Asp
>WENV180726712
ODGU01000305
287493
Actinomycetota
>WENV180728797
ODGU01097634
287493
Actinomycetota
>WENV180727452
ODGU01005752
400702
Actinomycetota
CTG
Gln
>WENV180728028
ODGU01020555
400702
Actinomycetota
CTG
Gln
>WENV180727738
ODGU01011034
49346
Actinomycetota
GAG
Leu
>WENV180727596
ODGU01008334
6108
Actinomycetota
TAT
Ile
>WENV180728451
ODGU01050420
331024
Actinomycetota
CTT
Lys
>WENV180727803
ODGU01012719
480461
Actinomycetota
GCA
Cys
>WENV180728357
ODGU01042173
285880
Actinomycetota
TCT
Arg
>WENV180728007
ODGU01019415
285880
Actinomycetota
TCT
Arg
>WENV180728426
ODGU01048751
215051
Actinomycetota
GGG
Pro
>WENV180726617
ODGU01000182
46668
Actinomycetota
GAG
Leu
>WENV180727422
ODGU01005135
481757
Actinomycetota
GCA
Cys
>WENV180726760
ODGU01000451
177977
Actinomycetota
TAA
Leu
>WENV180727805
ODGU01012719
399101
Actinomycetota
CAC
Val
>WENV180728555
ODGU01062059
399101
Actinomycetota
CAC
Val
>WENV180728736
ODGU01085489
209263
Actinomycetota
TAA
Leu
>WENV180726612
ODGU01000176
280986
Actinomycetota
GAA
Phe
>WENV180728586
ODGU01067221
281635
Actinomycetota
GGC
Ala
>WENV180726696
ODGU01000282
176353
Actinomycetota
CAA
Leu
>WENV180728130
ODGU01026249
285876
Actinomycetota
CGT
Thr
>WENV180728585
ODGU01067154
20643
Actinomycetota
GAG
Leu
>WENV180726467
ODGU01000035
402794
Actinomycetota
TCC
Gly
>WENV180728091
ODGU01024086
195311
Actinomycetota
TAC
Val
>WENV180729128
ODGU01209456
195311
Actinomycetota
TAC
Val
>WENV180727082
ODGU01001975
179433
Actinomycetota
TAA
Leu
>WENV180728365
ODGU01043484
285873
Actinomycetota
CTC
Glu
>WENV180728689
ODGU01081518
406406
Actinomycetota
CAC
Val
>WENV180728311
ODGU01038118
425841
Actinomycetota
CAC
Val
>WENV180727971
ODGU01018510
280744
Actinomycetota
GTG
His
>WENV180726545
ODGU01000089
280976
Actinomycetota
CCG
Arg
>WENV180726602
ODGU01000166
280988
Actinomycetota
TAC
Val
>WENV180728879
ODGU01114976
186871
Actinomycetota
CTT
Lys
>WENV180728829
ODGU01103158
186871
Actinomycetota
CTT
Lys
>WENV180726563
ODGU01000114
312253
Actinomycetota
TGC
Ala
>WENV180728169
ODGU01028714
312253
Actinomycetota
TGC
Ala
>WENV180728883
ODGU01115609
293207
Actinomycetota
CAT
Met
>WENV180728547
ODGU01061391
481756
Actinomycetota
TCC
Gly
>WENV180728493
ODGU01053909
118693
Actinomycetota
GTA
Tyr
>WENV180728459
ODGU01051391
180943
Actinomycetota
TGG
Pro
>WENV180726805
ODGU01000591
287452
Actinomycetota
CGT
Thr
>WENV180728236
ODGU01032752
290430
Actinomycetota
TCT
Arg
>WENV180727862
ODGU01014098
293215
Actinomycetota
TGC
Ala
>WENV180728020
ODGU01020002
285877
Actinomycetota
CCG
Arg
>WENV180726849
ODGU01000740
280983
Actinomycetota
TGT
Thr
>WENV180729108
ODGU01200072
48117
Actinomycetota
GAG
Leu
>WENV180726513
ODGU01000057
399188
Actinomycetota
CAT
Met
>WENV180726514
ODGU01000057
287437
Actinomycetota
CCA
Trp
>WENV180728354
ODGU01041888
281155
Actinomycetota
CGT
Thr
>WENV180727088
ODGU01002031
75478
Actinomycetota
CAG
Leu
>WENV180727285
ODGU01003896
284579
Actinomycetota
GTG
His
>WENV180727309
ODGU01004112
284579
Actinomycetota
GTG
His
>WENV180728182
ODGU01029213
187670
Actinomycetota
GAA
Phe
>WENV180728796
ODGU01097634
408668
Actinomycetota
CTG
Gln
>WENV180728621
ODGU01071070
187640
Actinomycetota
TGT
Thr
>WENV180728495
ODGU01053909
180945
Actinomycetota
CAT
Met
>WENV180728403
ODGU01046760
284887
Actinomycetota
GCC
Gly
>WENV180726868
ODGU01000840
20934
Actinomycetota
CGA
Ser
>WENV180728029
ODGU01020555
302285
Actinomycetota
CTC
Glu
>WENV180728174
ODGU01028895
292678
Actinomycetota
CTT
Lys
>WENV180728191
ODGU01030313
118329
Actinomycetota
GTA
Tyr
>WENV180726560
ODGU01000111
481234
Actinomycetota
CCC
Gly
>WENV180728618
ODGU01070465
281042
Actinomycetota
TGT
Thr
>WENV180726867
ODGU01000840
47028
Actinomycetota
GGA
Ser
>WENV180727992
ODGU01019201
293249
Actinomycetota
CAC
Val
>WENV180728583
ODGU01066760
293249
Actinomycetota
CAC
Val
>WENV180726753
ODGU01000424
15986
Actinomycetota
GCT
Ser
>WENV180726512
ODGU01000057
280979
Actinomycetota
GGT
Thr
>WENV180727420
ODGU01005135
417261
Actinomycetota
CAC
Val
>WENV180726562
ODGU01000114
176317
Actinomycetota
GAT
Ile
>WENV180727982
ODGU01018960
287401
Actinomycetota
CCG
Arg
>WENV180728676
ODGU01076361
307128
Actinomycetota
CCA
Trp
>WENV180729003
ODGU01149679
59810
Actinomycetota
CGA
Ser
>WENV180728944
ODGU01128786
482894
Actinomycetota
TCC
Gly
>WENV180727945
ODGU01017740
482493
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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