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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181379670
OFRD01005643
77010
Alphaproteobacteria
GAG
Leu
>WENV181379354
OFRD01000702
194696
Alphaproteobacteria
TCG
Arg
>WENV181379300
OFRD01000358
8684
Alphaproteobacteria
GCT
Ser
>WENV181380024
OFRD01021762
482973
Alphaproteobacteria
TCC
Gly
>WENV181380146
OFRD01034777
399001
Alphaproteobacteria
GAC
Val
>WENV181379847
OFRD01011733
482902
Alphaproteobacteria
TCC
Gly
>WENV181379271
OFRD01000198
400216
Alphaproteobacteria
TTG
Gln
>WENV181379396
OFRD01001124
100383
Alphaproteobacteria
GTA
Tyr
>WENV181379219
OFRD01000018
282966
Alphaproteobacteria
TTT
Lys
>WENV181379772
OFRD01008040
284697
Alphaproteobacteria
GAA
Phe
>WENV181379274
OFRD01000218
118147
Alphaproteobacteria
CAA
Leu
>WENV181380394
OFRD01074669
298628
Alphaproteobacteria
CCA
Trp
>WENV181379653
OFRD01005164
400223
Alphaproteobacteria
GGT
Thr
>WENV181379335
OFRD01000593
355084
Alphaproteobacteria
CGT
Thr
>WENV181379395
OFRD01001124
400214
Alphaproteobacteria
>WENV181379506
OFRD01002349
73440
Alphaproteobacteria
CAG
Leu
>WENV181379371
OFRD01000832
400222
Alphaproteobacteria
GCC
Gly
>WENV181379283
OFRD01000266
178239
Alphaproteobacteria
TAC
Val
>WENV181379290
OFRD01000296
42113
Alphaproteobacteria
TGA
Ser
>WENV181380300
OFRD01056115
427571
Alphaproteobacteria
GCC
Gly
>WENV181379303
OFRD01000370
399879
Alphaproteobacteria
GTT
Asn
>WENV181379384
OFRD01000998
282960
Alphaproteobacteria
CCA
Trp
>WENV181380424
OFRD01085987
400186
Alphaproteobacteria
GTT
Asn
>WENV181379276
OFRD01000229
178246
Alphaproteobacteria
TCT
Arg
>WENV181379294
OFRD01000335
178337
Alphaproteobacteria
GTG
His
>WENV181379302
OFRD01000370
480960
Alphaproteobacteria
GCA
Cys
>WENV181379313
OFRD01000399
121738
Alphaproteobacteria
GAG
Leu
>WENV181379466
OFRD01001872
195764
Alphaproteobacteria
ACG
Arg
>WENV181379284
OFRD01000266
178240
Alphaproteobacteria
GTC
Asp
>WENV181379567
OFRD01003246
178252
Alphaproteobacteria
TGG
Pro
>WENV181379266
OFRD01000171
29652
Alphaproteobacteria
CGA
Ser
>WENV181379600
OFRD01003899
310632
Alphaproteobacteria
TGT
Thr
>WENV181379282
OFRD01000266
118145
Alphaproteobacteria
TAG
Leu
>WENV181379404
OFRD01001183
180027
Alphaproteobacteria
CAT
Met
>WENV181379322
OFRD01000474
480958
Alphaproteobacteria
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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