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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181415529
OGCL01013632
358471
Alphaproteobacteria
TGC
Ala
>WENV181416878
OGCL01172297
30689
Alphaproteobacteria
CGA
Ser
>WENV181415095
OGCL01003962
315952
Alphaproteobacteria
GAA
Phe
>WENV181414753
OGCL01001278
117818
Alphaproteobacteria
GTA
Tyr
>WENV181417071
OGCL01218968
29656
Alphaproteobacteria
CGA
Ser
>WENV181414676
OGCL01001023
180177
Alphaproteobacteria
CCT
Arg
>WENV181415399
OGCL01009936
180177
Alphaproteobacteria
CCT
Arg
>WENV181416113
OGCL01052772
176230
Alphaproteobacteria
CGG
Pro
>WENV181415115
OGCL01004334
20388
Alphaproteobacteria
GCT
Ser
>WENV181415142
OGCL01004689
192328
Alphaproteobacteria
ACG
Arg
>WENV181415400
OGCL01009936
192328
Alphaproteobacteria
ACG
Arg
>WENV181414555
OGCL01000637
480418
Alphaproteobacteria
GCA
Cys
>WENV181414299
OGCL01000188
176233
Alphaproteobacteria
>WENV181415460
OGCL01011461
29571
Alphaproteobacteria
CGA
Ser
>WENV181416600
OGCL01111324
400384
Alphaproteobacteria
TTC
Glu
>WENV181415554
OGCL01014382
29671
Alphaproteobacteria
TGA
Ser
>WENV181414850
OGCL01001759
156091
Alphaproteobacteria
GGG
Pro
>WENV181415721
OGCL01021125
400214
Alphaproteobacteria
>WENV181416136
OGCL01055200
282977
Alphaproteobacteria
CAT
Met
>WENV181416581
OGCL01106949
439135
Alphaproteobacteria
CAC
Val
>WENV181414841
OGCL01001694
118387
Alphaproteobacteria
CAA
Leu
>WENV181416244
OGCL01064652
355040
Alphaproteobacteria
CTT
Lys
>WENV181415781
OGCL01025321
494510
Alphaproteobacteria
CTG
Gln
>WENV181416297
OGCL01069821
494510
Alphaproteobacteria
CTG
Gln
>WENV181416855
OGCL01166699
494510
Alphaproteobacteria
CTG
Gln
>WENV181415187
OGCL01005486
178327
Alphaproteobacteria
GTG
His
>WENV181415314
OGCL01007780
178331
Alphaproteobacteria
CCG
Arg
>WENV181415509
OGCL01012750
178331
Alphaproteobacteria
CCG
Arg
>WENV181414907
OGCL01002143
302081
Alphaproteobacteria
CCA
Trp
>WENV181414620
OGCL01000826
34617
Alphaproteobacteria
GGA
Ser
>WENV181415137
OGCL01004526
283066
Alphaproteobacteria
CAT
Met
>WENV181416162
OGCL01057766
283066
Alphaproteobacteria
CAT
Met
>WENV181416769
OGCL01142658
283596
Alphaproteobacteria
TTC
Glu
>WENV181414538
OGCL01000590
400249
Alphaproteobacteria
GCC
Gly
>WENV181414459
OGCL01000423
176234
Alphaproteobacteria
CCT
Arg
>WENV181416307
OGCL01071601
176234
Alphaproteobacteria
CCT
Arg
>WENV181417029
OGCL01204700
102146
Alphaproteobacteria
GTA
Tyr
>WENV181415005
OGCL01002956
117819
Alphaproteobacteria
TAG
Leu
>WENV181415006
OGCL01002972
398980
Alphaproteobacteria
GAC
Val
>WENV181417023
OGCL01204024
400544
Alphaproteobacteria
GGT
Thr
>WENV181416662
OGCL01123043
184177
Alphaproteobacteria
TCT
Arg
>WENV181414958
OGCL01002559
290520
Alphaproteobacteria
TAC
Val
>WENV181414653
OGCL01000947
228432
Alphaproteobacteria
TGG
Pro
>WENV181415139
OGCL01004652
354296
Alphaproteobacteria
TAC
Val
>WENV181415166
OGCL01005089
400274
Alphaproteobacteria
TTT
Lys
>WENV181415339
OGCL01008526
400274
Alphaproteobacteria
TTT
Lys
>WENV181415116
OGCL01004334
290521
Alphaproteobacteria
GAA
Phe
>WENV181415426
OGCL01010819
178328
Alphaproteobacteria
TGG
Pro
>WENV181416732
OGCL01134824
428327
Alphaproteobacteria
GCC
Gly
>WENV181416037
OGCL01044543
29739
Alphaproteobacteria
CGA
Ser
>WENV181416243
OGCL01064652
404712
Alphaproteobacteria
CCC
Gly
>WENV181414896
OGCL01002071
178299
Alphaproteobacteria
CGG
Pro
>WENV181416847
OGCL01164754
195438
Alphaproteobacteria
GAT
Ile
>WENV181415084
OGCL01003761
399044
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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