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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
96 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181798908
OGRX01001392
127376
Bacillota
TAG
Leu
>WENV181798966
OGRX01005611
178066
Bacillota
CAT
Met
>WENV181798874
OGRX01000800
448352
Bacillota
GCC
Gly
>WENV181798891
OGRX01001035
281299
Bacillota
TTT
Lys
>WENV181798830
OGRX01000412
377363
Bacillota
GAA
Phe
>WENV181798920
OGRX01001950
377363
Bacillota
GAA
Phe
>WENV181798930
OGRX01002542
184235
Bacillota
TCG
Arg
>WENV181798900
OGRX01001202
399268
Bacillota
ACG
Arg
>WENV181798788
OGRX01000280
280870
Bacillota
TGC
Ala
>WENV181798811
OGRX01000374
280870
Bacillota
TGC
Ala
>WENV181798826
OGRX01000404
280870
Bacillota
TGC
Ala
>WENV181798836
OGRX01000469
280870
Bacillota
TGC
Ala
>WENV181798773
OGRX01000193
238111
Bacillota
CAT
Met
>WENV181798889
OGRX01001035
292444
Bacillota
CTT
Lys
>WENV181798806
OGRX01000354
480520
Bacillota
TCC
Gly
>WENV181798929
OGRX01002542
480520
Bacillota
TCC
Gly
>WENV181798935
OGRX01003296
480520
Bacillota
TCC
Gly
>WENV181798938
OGRX01003386
480520
Bacillota
TCC
Gly
>WENV181798841
OGRX01000494
29462
Bacillota
GGA
Ser
>WENV181798859
OGRX01000725
176679
Bacillota
TCT
Arg
>WENV181798939
OGRX01003386
176679
Bacillota
TCT
Arg
>WENV181798847
OGRX01000542
403916
Bacillota
CTG
Gln
>WENV181798842
OGRX01000515
400111
Bacillota
GTT
Asn
>WENV181798888
OGRX01000994
400111
Bacillota
GTT
Asn
>WENV181798878
OGRX01000835
176678
Bacillota
GTC
Asp
>WENV181798795
OGRX01000310
289738
Bacillota
GGT
Thr
>WENV181798865
OGRX01000767
141173
Bacillota
GTA
Tyr
>WENV181798838
OGRX01000469
20274
Bacillota
GCT
Ser
>WENV181798840
OGRX01000469
20274
Bacillota
GCT
Ser
>WENV181798932
OGRX01002992
20360
Bacillota
TGA
Ser
>WENV181798934
OGRX01002992
20360
Bacillota
TGA
Ser
>WENV181798868
OGRX01000800
376224
Bacillota
TGG
Pro
>WENV181798919
OGRX01001626
376224
Bacillota
TGG
Pro
>WENV181798959
OGRX01005410
282752
Bacillota
TTT
Lys
>WENV181798887
OGRX01000968
282752
Bacillota
TTT
Lys
>WENV181798846
OGRX01000533
46686
Bacillota
TAA
Leu
>WENV181798873
OGRX01000800
141334
Bacillota
TAG
Leu
>WENV181798779
OGRX01000249
141334
Bacillota
TAG
Leu
>WENV181798759
OGRX01000121
441615
Bacillota
GTT
Asn
>WENV181798839
OGRX01000469
20238
Bacillota
TGA
Ser
>WENV181798837
OGRX01000469
20238
Bacillota
TGA
Ser
>WENV181798781
OGRX01000249
291558
Bacillota
CTT
Lys
>WENV181798897
OGRX01001102
291558
Bacillota
CTT
Lys
>WENV181798880
OGRX01000854
399266
Bacillota
>WENV181798733
OGRX01000095
73130
Bacillota
CAA
Leu
>WENV181798832
OGRX01000437
403917
Bacillota
CCT
Arg
>WENV181798752
OGRX01000113
371336
Bacillota
GAA
Phe
>WENV181798907
OGRX01001385
448353
Bacillota
CTC
Glu
>WENV181798861
OGRX01000760
280871
Bacillota
GAA
Phe
>WENV181798875
OGRX01000813
280871
Bacillota
GAA
Phe
>WENV181798902
OGRX01001239
400112
Bacillota
GCC
Gly
>WENV181798862
OGRX01000760
400112
Bacillota
GCC
Gly
>WENV181798961
OGRX01005410
400112
Bacillota
GCC
Gly
>WENV181798967
OGRX01005611
46663
Bacillota
TAA
Leu
>WENV181798848
OGRX01000542
100988
Bacillota
AAG
Leu
>WENV181798905
OGRX01001251
29614
Bacillota
GGA
Ser
>WENV181798757
OGRX01000119
399041
Bacillota
CCA
Trp
>WENV181798824
OGRX01000387
399041
Bacillota
CCA
Trp
>WENV181798863
OGRX01000760
480905
Bacillota
TCC
Gly
>WENV181798884
OGRX01000904
480905
Bacillota
TCC
Gly
>WENV181798903
OGRX01001239
480905
Bacillota
TCC
Gly
>WENV181798962
OGRX01005410
480905
Bacillota
TCC
Gly
>WENV181798904
OGRX01001239
282756
Bacillota
CTT
Lys
>WENV181798885
OGRX01000904
282756
Bacillota
CTT
Lys
>WENV181798854
OGRX01000594
100098
Bacillota
GAG
Leu
>WENV181798940
OGRX01003386
281302
Bacillota
GTG
His
>WENV181798870
OGRX01000800
281302
Bacillota
GTG
His
>WENV181798896
OGRX01001090
302187
Bacillota
CAT
Met
>WENV181798793
OGRX01000303
281300
Bacillota
GAA
Phe
>WENV181798914
OGRX01001453
281300
Bacillota
GAA
Phe
>WENV181798915
OGRX01001453
399272
Bacillota
GCA
Cys
>WENV181798852
OGRX01000571
399272
Bacillota
GCA
Cys
>WENV181798696
OGRX01000018
399272
Bacillota
GCA
Cys
>WENV181798963
OGRX01005410
178067
Bacillota
TCG
Arg
>WENV181798912
OGRX01001433
100097
Bacillota
GTA
Tyr
>WENV181798964
OGRX01005611
52257
Bacillota
TAA
Leu
>WENV181798933
OGRX01002992
20361
Bacillota
GCT
Ser
>WENV181798869
OGRX01000800
182384
Bacillota
TCT
Arg
>WENV181798714
OGRX01000045
117940
Bacillota
GTA
Tyr
>WENV181798797
OGRX01000316
117940
Bacillota
GTA
Tyr
>WENV181798872
OGRX01000800
354380
Bacillota
TTT
Lys
>WENV181798925
OGRX01002406
178065
Bacillota
ACG
Arg
>WENV181798918
OGRX01001622
449573
Bacillota
>WENV181798879
OGRX01000844
282754
Bacillota
TGT
Thr
>WENV181798911
OGRX01001433
282754
Bacillota
TGT
Thr
>WENV181798866
OGRX01000767
368693
Bacillota
TAC
Val
>WENV181798831
OGRX01000412
484342
Bacillota
GCA
Cys
>WENV181798901
OGRX01001223
282755
Bacillota
GGT
Thr
>WENV181798796
OGRX01000316
399260
Bacillota
TGT
Thr
>WENV181798867
OGRX01000767
399260
Bacillota
TGT
Thr
>WENV181798792
OGRX01000303
376258
Bacillota
TGG
Pro
>WENV181798805
OGRX01000354
376258
Bacillota
TGG
Pro
>WENV181798952
OGRX01003973
400110
Bacillota
CCT
Arg
>WENV181798890
OGRX01001035
399264
Bacillota
TTG
Gln
>WENV181798834
OGRX01000454
318172
Bacillota
CCA
Trp
>WENV181798928
OGRX01002508
282751
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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