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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182959111
OKWI01003944
200563
Bacillota
TGG
Pro
>WENV182958885
OKWI01000031
280870
Bacillota
TGC
Ala
>WENV182958945
OKWI01000081
480520
Bacillota
TCC
Gly
>WENV182958949
OKWI01000081
480520
Bacillota
TCC
Gly
>WENV182958951
OKWI01000081
480520
Bacillota
TCC
Gly
>WENV182958958
OKWI01000081
480520
Bacillota
TCC
Gly
>WENV182959050
OKWI01000404
184537
Bacillota
ACG
Arg
>WENV182958908
OKWI01000042
20221
Bacillota
>WENV182959127
OKWI01006050
412083
Bacillota
GTT
Asn
>WENV182959077
OKWI01000765
296855
Bacillota
GGT
Thr
>WENV182959110
OKWI01003944
280644
Bacillota
CCA
Trp
>WENV182958872
OKWI01000020
400904
Bacillota
CCT
Arg
>WENV182959079
OKWI01000812
48505
Bacillota
TGA
Ser
>WENV182958918
OKWI01000054
418726
Bacillota
TGT
Thr
>WENV182958828
OKWI01000004
418726
Bacillota
TGT
Thr
>WENV182959087
OKWI01001502
289717
Bacillota
CTT
Lys
>WENV182959052
OKWI01000409
289717
Bacillota
CTT
Lys
>WENV182959051
OKWI01000408
289717
Bacillota
CTT
Lys
>WENV182958900
OKWI01000037
20274
Bacillota
GCT
Ser
>WENV182958917
OKWI01000054
298270
Bacillota
TAC
Val
>WENV182959008
OKWI01000128
179563
Bacillota
GAT
Ile
>WENV182958989
OKWI01000113
179563
Bacillota
GAT
Ile
>WENV182959120
OKWI01005131
284391
Bacillota
GTG
His
>WENV182958902
OKWI01000037
46686
Bacillota
TAA
Leu
>WENV182959034
OKWI01000201
46686
Bacillota
TAA
Leu
>WENV182959044
OKWI01000256
20932
Bacillota
GCT
Ser
>WENV182959047
OKWI01000383
13228
Bacillota
GGA
Ser
>WENV182958957
OKWI01000081
141334
Bacillota
TAG
Leu
>WENV182958943
OKWI01000081
141334
Bacillota
TAG
Leu
>WENV182958856
OKWI01000014
141334
Bacillota
TAG
Leu
>WENV182959055
OKWI01000453
482593
Bacillota
CCC
Gly
>WENV182958864
OKWI01000017
176014
Bacillota
TCT
Arg
>WENV182959072
OKWI01000723
339995
Bacillota
TGC
Ala
>WENV182958996
OKWI01000126
441615
Bacillota
GTT
Asn
>WENV182959048
OKWI01000392
20942
Bacillota
GGA
Ser
>WENV182958863
OKWI01000017
398916
Bacillota
>WENV182958922
OKWI01000066
480360
Bacillota
GCA
Cys
>WENV182958953
OKWI01000081
291558
Bacillota
CTT
Lys
>WENV182958858
OKWI01000014
291558
Bacillota
CTT
Lys
>WENV182958923
OKWI01000066
176087
Bacillota
ACG
Arg
>WENV182959018
OKWI01000172
13376
Bacillota
CGA
Ser
>WENV182958846
OKWI01000010
56095
Bacillota
CAA
Leu
>WENV182958956
OKWI01000081
283502
Bacillota
TTT
Lys
>WENV182958942
OKWI01000081
283502
Bacillota
TTT
Lys
>WENV182959035
OKWI01000201
399266
Bacillota
>WENV182959036
OKWI01000201
399266
Bacillota
>WENV182959078
OKWI01000765
184495
Bacillota
CAT
Met
>WENV182959074
OKWI01000765
332181
Bacillota
TGT
Thr
>WENV182959000
OKWI01000128
179130
Bacillota
ACG
Arg
>WENV182958926
OKWI01000067
399041
Bacillota
CCA
Trp
>WENV182958849
OKWI01000012
399041
Bacillota
CCA
Trp
>WENV182958940
OKWI01000081
281302
Bacillota
GTG
His
>WENV182958954
OKWI01000081
281302
Bacillota
GTG
His
>WENV182958924
OKWI01000066
280640
Bacillota
TAC
Val
>WENV182958875
OKWI01000026
399272
Bacillota
GCA
Cys
>WENV182958921
OKWI01000060
284389
Bacillota
CTT
Lys
>WENV182958939
OKWI01000081
182384
Bacillota
TCT
Arg
>WENV182958946
OKWI01000081
182384
Bacillota
TCT
Arg
>WENV182958952
OKWI01000081
182384
Bacillota
TCT
Arg
>WENV182959102
OKWI01002550
432453
Bacillota
TTC
Glu
>WENV182958914
OKWI01000052
144655
Bacillota
TAG
Leu
>WENV182959115
OKWI01003945
119459
Bacillota
TAG
Leu
>WENV182958859
OKWI01000014
117940
Bacillota
GTA
Tyr
>WENV182959100
OKWI01002550
333281
Bacillota
GTT
Asn
>WENV182958999
OKWI01000128
51970
Bacillota
TAA
Leu
>WENV182959081
OKWI01000896
280547
Bacillota
GTC
Asp
>WENV182959080
OKWI01000894
280547
Bacillota
GTC
Asp
>WENV182959073
OKWI01000742
280547
Bacillota
GTC
Asp
>WENV182959030
OKWI01000190
344985
Bacillota
GAA
Phe
>WENV182959101
OKWI01002550
289761
Bacillota
TTT
Lys
>WENV182959032
OKWI01000191
284390
Bacillota
CGT
Thr
>WENV182958905
OKWI01000039
484342
Bacillota
GCA
Cys
>WENV182959103
OKWI01002550
289715
Bacillota
TAC
Val
>WENV182959097
OKWI01002203
289715
Bacillota
TAC
Val
>WENV182959015
OKWI01000133
399260
Bacillota
TGT
Thr
>WENV182958861
OKWI01000014
399260
Bacillota
TGT
Thr
>WENV182958829
OKWI01000004
1287
Bacillota
>WENV182959085
OKWI01001298
184539
Bacillota
TCT
Arg
>WENV182959012
OKWI01000133
399261
Bacillota
>WENV182959112
OKWI01003944
176017
Bacillota
GAT
Ile
>WENV182958938
OKWI01000081
328987
Bacillota
TGG
Pro
>WENV182958947
OKWI01000081
328987
Bacillota
TGG
Pro
>WENV182959037
OKWI01000212
328987
Bacillota
TGG
Pro
>WENV182958860
OKWI01000014
288989
Bacillota
TAC
Val
>WENV182959013
OKWI01000133
288989
Bacillota
TAC
Val
>WENV182958986
OKWI01000113
284680
Bacillota
TTT
Lys
>WENV182958976
OKWI01000104
432249
Bacillota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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