tRNA genes clustered and arranged according to each identical group

Investigation of prokaryote diversity in the sub-seafloor biosphere by 16S rRNA gene tag (V6) sequencing (SRP001218)

HIT: 7 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.30895 (42 seq.)
>WENV170115101 CENF01404911 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1326 1236 - Ser TGA [ENA] ¢þ
>WENV170124539 CENO01196952 [CENO] marine metagenome genome assembly TARA_033_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 560 470 - Ser TGA [ENA] ¢þ
>WENV170150806 CEOC01158664 [CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1139 1049 - Ser TGA [ENA] ¢þ
>WENV170156930 CEOJ01022237 [CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 997 1087 + Ser TGA [ENA] ¢þ
>WENV170166597 CEOO01081252 [CEOO] marine metagenome genome assembly TARA_036_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 259 169 - Ser TGA [ENA] ¢þ
>WENV170168612 CEOP01106773 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 754 844 + Ser TGA [ENA] ¢þ
>WENV170198305 CEPK01323418 [CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1286 1376 + Ser TGA [ENA] ¢þ
>WENV170258659 CEQY01093057 [CEQY] marine metagenome genome assembly TARA_070_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 226 316 + Ser TGA [ENA] ¢þ
>WENV170321980 CESR01097873 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 14301 14211 - Ser TGA [ENA] ¢þ
>WENV170354891 CETI01184328 [CETI] marine metagenome genome assembly TARA_111_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 238 328 + Ser TGA [ENA] ¢þ
>WENV170364702 CETM01396471 [CETM] marine metagenome genome assembly TARA_122_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 658 568 - Ser TGA [ENA] ¢þ
>WENV170366608 CETO01081129 [CETO] marine metagenome genome assembly TARA_122_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 386 476 + Ser TGA [ENA] ¢þ
>WENV170367625 CETP01137874 [CETP] marine metagenome genome assembly TARA_122_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 506 596 + Ser TGA [ENA] ¢þ
>WENV170368345 CETQ01043314 [CETQ] marine metagenome genome assembly TARA_110_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 116 206 + Ser TGA [ENA] ¢þ
>WENV170385899 CETY01114884 [CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 397 487 + Ser TGA [ENA] ¢þ
>WENV170410004 CEUJ01064002 [CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 616 706 + Ser TGA [ENA] ¢þ
>WENV170410677 CEUJ01123922 [CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 206 296 + Ser TGA [ENA] ¢þ
>WENV170415180 CEUL01022267 [CEUL] marine metagenome genome assembly TARA_124_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 272 362 + Ser TGA [ENA] ¢þ
>WENV170420261 CEUM01314873 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 376 286 - Ser TGA [ENA] ¢þ
>WENV170425690 CEUQ01016051 [CEUQ] marine metagenome genome assembly TARA_124_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 903 993 + Ser TGA [ENA] ¢þ
>WENV170429342 CEUR01048854 [CEUR] marine metagenome genome assembly TARA_123_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 871 961 + Ser TGA [ENA] ¢þ
>WENV170441857 CEUV01294118 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1304 1394 + Ser TGA [ENA] ¢þ
>WENV170442570 CEUW01048260 [CEUW] marine metagenome genome assembly TARA_122_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 657 567 - Ser TGA [ENA] ¢þ
>WENV170449233 CEUZ01049088 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 502 592 + Ser TGA [ENA] ¢þ
>WENV170466608 CEVE01068390 [CEVE] marine metagenome genome assembly TARA_124_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 873 963 + Ser TGA [ENA] ¢þ
>WENV170481805 CEVL01348284 [CEVL] marine metagenome genome assembly TARA_146_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 775 865 + Ser TGA [ENA] ¢þ
>WENV170494574 CEVR01104292 [CEVR] marine metagenome genome assembly TARA_148_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 260 170 - Ser TGA [ENA] ¢þ
>WENV170496643 CEVS01082765 [CEVS] marine metagenome genome assembly TARA_151_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 690 780 + Ser TGA [ENA] ¢þ
>WENV170504922 CEVW01014148 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 922 1012 + Ser TGA [ENA] ¢þ
>WENV170507793 CEVX01091794 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 560 650 + Ser TGA [ENA] ¢þ
>WENV170509791 CEVY01068120 [CEVY] marine metagenome genome assembly TARA_065_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 261 171 - Ser TGA [ENA] ¢þ
>WENV170511710 CEVZ01112282 [CEVZ] marine metagenome genome assembly TARA_041_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 290 200 - Ser TGA [ENA] ¢þ
>WENV170605356 FUWD010477102 [FUWD] metagenome; unknown 374 284 - Ser TGA [ENA] ¢þ
>WENV170809384 MDSW01130968 [MDSW] marine metagenome; seawater 4 94 + Ser TGA [ENA] ¢þ
>WENV170825993 MDSY01103605 [MDSY] marine metagenome; seawater 104 14 - Ser TGA [ENA] ¢þ
>WENV170902933 MDTD01193849 [MDTD] marine metagenome; seawater 6 96 + Ser TGA [ENA] ¢þ
>SRA1016577 SRR027355.12356 Investigation of prokaryote diversity in the sub-seafloor biosphere by 16S rRNA gene tag (V6) sequencing (SRP001218) 22 112 + Ser TGA [SRA]
>SRA1016579 SRR027355.34386 Investigation of prokaryote diversity in the sub-seafloor biosphere by 16S rRNA gene tag (V6) sequencing (SRP001218) 22 112 + Ser TGA [SRA]
>SRA1016581 SRR027355.44535 Investigation of prokaryote diversity in the sub-seafloor biosphere by 16S rRNA gene tag (V6) sequencing (SRP001218) 22 112 + Ser TGA [SRA]
>WENV032603 AACY021459290 Marine microbial communities from Global Ocean Sampling (GOS) 334 242 - Ser TGA [ENA]
>WENV053529 AACY023102745 Marine microbial communities from Global Ocean Sampling (GOS) 185 93 - Ser TGA [ENA]
>WENV066868 AACY023665954 Marine microbial communities from Global Ocean Sampling (GOS) 565 657 + Ser TGA [ENA]
Identical group No.41992 (1 seq.)
>SRA1016576 SRR027355.554 Investigation of prokaryote diversity in the sub-seafloor biosphere by 16S rRNA gene tag (V6) sequencing (SRP001218) 22 112 + Ser TGA [SRA]
Identical group No.105750 (1 seq.)
>SRA1016580 SRR027355.36724 Investigation of prokaryote diversity in the sub-seafloor biosphere by 16S rRNA gene tag (V6) sequencing (SRP001218) 19 106 + Leu CAA [SRA]
Identical group No.173022 (1 seq.)
>SRA1016582 SRR027355.49284 Investigation of prokaryote diversity in the sub-seafloor biosphere by 16S rRNA gene tag (V6) sequencing (SRP001218) 21 103 + Leu TAA [SRA]
Identical group No.233204 (1 seq.)
>SRA1016584 SRR027355.58354 Investigation of prokaryote diversity in the sub-seafloor biosphere by 16S rRNA gene tag (V6) sequencing (SRP001218) 164 245 + Gln TTG [SRA]
Identical group No.407195 (1 seq.)
>SRA1016583 SRR027355.52293 Investigation of prokaryote diversity in the sub-seafloor biosphere by 16S rRNA gene tag (V6) sequencing (SRP001218) 167 242 + Pro CGG [SRA]
Identical group No.602938 (1 seq.)
>SRA1016578 SRR027355.28523 Investigation of prokaryote diversity in the sub-seafloor biosphere by 16S rRNA gene tag (V6) sequencing (SRP001218) 76 149 + Lys TTT [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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