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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183554608
OOBN01000003
198659
Actinomycetota
TAC
Val
>WENV183554609
OOBN01000003
235149
Actinomycetota
CCT
Arg
>WENV183554624
OOBN01000007
119485
Actinomycetota
TAA
Leu
>WENV183554625
OOBN01000007
145347
Actinomycetota
CAA
Leu
>WENV183554626
OOBN01000007
144635
Actinomycetota
TGG
Pro
>WENV183554628
OOBN01000009
235101
Actinomycetota
TTT
Lys
>WENV183554630
OOBN01000009
338148
Actinomycetota
CTG
Gln
>WENV183554631
OOBN01000009
235121
Actinomycetota
CGT
Thr
>WENV183554632
OOBN01000009
113601
Actinomycetota
TAG
Leu
>WENV183554668
OOBN01000029
144823
Actinomycetota
TCT
Arg
>WENV183554676
OOBN01000032
144589
Actinomycetota
ACG
Arg
>WENV183554677
OOBN01000032
144589
Actinomycetota
ACG
Arg
>WENV183554678
OOBN01000032
278447
Actinomycetota
GTG
His
>WENV183554700
OOBN01000045
145269
Actinomycetota
CAT
Met
>WENV183554701
OOBN01000045
176456
Actinomycetota
TCT
Arg
>WENV183554730
OOBN01000074
411554
Actinomycetota
CCC
Gly
>WENV183554731
OOBN01000074
80622
Actinomycetota
CAG
Leu
>WENV183554733
OOBN01000074
235174
Actinomycetota
TGC
Ala
>WENV183554734
OOBN01000074
235173
Actinomycetota
GGC
Ala
>WENV183554774
OOBN01000103
338239
Actinomycetota
TTC
Glu
>WENV183554776
OOBN01000103
44855
Actinomycetota
TGA
Ser
>WENV183554791
OOBN01000114
144660
Actinomycetota
TAC
Val
>WENV183554797
OOBN01000120
273786
Actinomycetota
CGT
Thr
>WENV183554798
OOBN01000120
113601
Actinomycetota
TAG
Leu
>WENV183554799
OOBN01000120
235146
Actinomycetota
CGT
Thr
>WENV183554800
OOBN01000122
411601
Actinomycetota
CCC
Gly
>WENV183554801
OOBN01000122
80622
Actinomycetota
CAG
Leu
>WENV183554806
OOBN01000131
16467
Actinomycetota
GCT
Ser
>WENV183554807
OOBN01000131
98279
Actinomycetota
GTA
Tyr
>WENV183554812
OOBN01000139
243671
Actinomycetota
CTC
Glu
>WENV183554813
OOBN01000139
338148
Actinomycetota
CTG
Gln
>WENV183554830
OOBN01000158
44942
Actinomycetota
TGA
Ser
>WENV183554835
OOBN01000158
37070
Actinomycetota
CGA
Ser
>WENV183554882
OOBN01000212
144825
Actinomycetota
CAT
Met
>WENV183554883
OOBN01000212
235348
Actinomycetota
CCT
Arg
>WENV183554902
OOBN01000245
145343
Actinomycetota
GGG
Pro
>WENV183554939
OOBN01000323
235173
Actinomycetota
GGC
Ala
>WENV183554940
OOBN01000323
235148
Actinomycetota
GTT
Asn
>WENV183554947
OOBN01000331
201717
Actinomycetota
CTT
Lys
>WENV183554962
OOBN01000373
254857
Actinomycetota
CCG
Arg
>WENV183554966
OOBN01000373
235199
Actinomycetota
CAC
Val
>WENV183555061
OOBN01000590
254857
Actinomycetota
CCG
Arg
>WENV183555080
OOBN01000681
144826
Actinomycetota
GGG
Pro
>WENV183555187
OOBN01001023
158720
Actinomycetota
ACG
Arg
>WENV183555261
OOBN01001402
16222
Actinomycetota
GAG
Leu
>WENV183555277
OOBN01001547
144595
Actinomycetota
CAA
Leu
>WENV183555278
OOBN01001547
163764
Actinomycetota
TGG
Pro
>WENV183555303
OOBN01001716
95593
Actinomycetota
>WENV183555311
OOBN01001750
413665
Actinomycetota
TTG
Gln
>WENV183555312
OOBN01001750
235347
Actinomycetota
GGC
Ala
>WENV183555316
OOBN01001804
144700
Actinomycetota
CAT
Met
>WENV183555317
OOBN01001804
23370
Actinomycetota
GCT
Ser
>WENV183555364
OOBN01002237
44862
Actinomycetota
CGA
Ser
>WENV183555446
OOBN01002993
235194
Actinomycetota
GTG
His
>WENV183555551
OOBN01004711
153948
Actinomycetota
GGG
Pro
>WENV183555829
OOBN01017056
245301
Actinomycetota
GCC
Gly
>WENV183555995
OOBN01042142
414234
Actinomycetota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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