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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183633602
OOIG01001222
95593
Actinomycetota
>WENV183634070
OOIG01007956
158720
Actinomycetota
ACG
Arg
>WENV183633516
OOIG01000834
144595
Actinomycetota
CAA
Leu
>WENV183633295
OOIG01000275
235199
Actinomycetota
CAC
Val
>WENV183633810
OOIG01002990
80622
Actinomycetota
CAG
Leu
>WENV183633603
OOIG01001222
144700
Actinomycetota
CAT
Met
>WENV183633384
OOIG01000465
144825
Actinomycetota
CAT
Met
>WENV183633342
OOIG01000373
411601
Actinomycetota
CCC
Gly
>WENV183633325
OOIG01000325
254857
Actinomycetota
CCG
Arg
>WENV183633238
OOIG01000199
235153
Actinomycetota
CCT
Arg
>WENV183633609
OOIG01001244
235348
Actinomycetota
CCT
Arg
>WENV183633650
OOIG01001610
44862
Actinomycetota
CGA
Ser
>WENV183633361
OOIG01000419
235146
Actinomycetota
CGT
Thr
>WENV183633359
OOIG01000419
313386
Actinomycetota
CGT
Thr
>WENV183633856
OOIG01003361
295695
Actinomycetota
CTC
Glu
>WENV183633857
OOIG01003361
338148
Actinomycetota
CTG
Gln
>WENV183633239
OOIG01000200
414234
Actinomycetota
CTG
Gln
>WENV183633377
OOIG01000450
201717
Actinomycetota
CTT
Lys
>WENV183633294
OOIG01000275
356045
Actinomycetota
GAC
Val
>WENV183633591
OOIG01001170
17009
Actinomycetota
GAG
Leu
>WENV183633149
OOIG01000087
174149
Actinomycetota
GAT
Ile
>WENV183633727
OOIG01002084
144636
Actinomycetota
GAT
Ile
>WENV183634005
OOIG01006036
245301
Actinomycetota
GCC
Gly
>WENV183633604
OOIG01001222
23370
Actinomycetota
GCT
Ser
>WENV183633864
OOIG01003559
53078
Actinomycetota
GGA
Ser
>WENV183633514
OOIG01000834
235347
Actinomycetota
GGC
Ala
>WENV183633705
OOIG01001962
144826
Actinomycetota
GGG
Pro
>WENV183633555
OOIG01000978
153948
Actinomycetota
GGG
Pro
>WENV183633456
OOIG01000646
235194
Actinomycetota
GTG
His
>WENV183633850
OOIG01003312
235148
Actinomycetota
GTT
Asn
>WENV183633176
OOIG01000110
338139
Actinomycetota
GTT
Asn
>WENV183633976
OOIG01005302
144660
Actinomycetota
TAC
Val
>WENV183633360
OOIG01000419
113601
Actinomycetota
TAG
Leu
>WENV183633919
OOIG01004368
144823
Actinomycetota
TCT
Arg
>WENV183633393
OOIG01000480
44855
Actinomycetota
TGA
Ser
>WENV183633150
OOIG01000087
235174
Actinomycetota
TGC
Ala
>WENV183633515
OOIG01000834
163764
Actinomycetota
TGG
Pro
>WENV183633551
OOIG01000972
158513
Actinomycetota
TGG
Pro
>WENV183633362
OOIG01000420
338239
Actinomycetota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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